>Osa03LNT0470600.1

GTTTTCAACTGAAAAAGTCATCAACAATAAAGTTGTATAACTCATCAAGATATATAACTTTTATTTTGATCATTTCTTCATCCCACAAAGTTATTTGTAAGATTGTTCACAGAATAAACATATCTTATATAGTTTTTATAAAACTATATAAGAGATGTACATTTTGTAAAAAAAATCTTACAAATCACTTTGTCGGATGAAGAAATGACCAAAATAGAAGTTATAGATCTTGATGAGTTATACAACTTTGTTATTGATGACTTTTTCAGATGAAATC

Explanation	CPC Score
noncoding	-1.0729

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0470600.1	osa-miR1876	Translation	4.0	18.599	1	24
Osa03LNT0470600.1	osa-miR2931	Cleavage	4.0	15.376	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0470600.1	3	nan	Resistance or Tolerance	Blast resistance	RM16	RM168
Osa03LNT0470600.1	3	gw3.1	Morphological trait	Seed	RZ672	RZ474
Osa03LNT0470600.1	3	qSV-3-1	Morphological trait	Shoot/Seedling	RM156	RM168
Osa03LNT0470600.1	3	qSV-3-1	Morphological trait	Shoot/Seedling	RM156	RM168
Osa03LNT0470600.1	3	Yd3-13	Morphological trait	Seed	RZ403	CDO337
Osa03LNT0470600.1	3	nan	Morphological trait	Panicle/flower	RZ448	RZ403
Osa03LNT0470600.1	3	nan	Morphological trait	Shoot/Seedling	RZ403	RZ630
Osa03LNT0470600.1	3	nan	Morphological trait	Shoot/Seedling	RZ452	RZ448

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus