>Osa06LNT0508800.1

GATTTGAACAAAAAAAGTCATCAACAACAAAGTTATATAATTCATCAAGACCTATAACTTTCATTTTGGTCATTTCTTCATCCAACAAAGTGATAATAATATTGTTCACAAAATTCACATATTTTTCATCTAGTTTTATAAACTATAACACATATATGTAAATTTTGTGAACAATGTTACCAACACTTTATCGGATGAAGAAATTACAAAAATAAAAGTTACAGATCTTGACGAGTTATACAACTTTATTGTTCATGACTTTTTTAGTTGAAATC

Explanation	CPC Score
noncoding (weak)	-0.291026

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa06LNT0508800.1	6	tgw6.1	Physiological trait	Source activity	RG264	RM3
Osa06LNT0508800.1	6	ph6	Morphological trait	Dwarf	RZ667	RG653
Osa06LNT0508800.1	6	gw6	Morphological trait	Panicle/flower	RG424	R2549
Osa06LNT0508800.1	6	nan	Physiological trait	Eating quality	RM253	RM162
Osa06LNT0508800.1	6	asv6-1	Physiological trait	Eating quality	RM3	RM217
Osa06LNT0508800.1	6	qLDLJ-6-1,2,3	Physiological trait	Source activity	RM217	RM3
Osa06LNT0508800.1	6	RPLD4	Physiological trait	Eating quality	RG424	RG172
Osa06LNT0508800.1	6	amy6-1	Physiological trait	Eating quality	RM3	RM217

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa06LNT0508800.1	osa-MIR821a	87.121	264	12	274	4.38e-81	298
Osa06LNT0508800.1	osa-MIR821c	85.385	260	8	266	3.33e-72	268

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus