>Osa07LNT0527800.1

GATTTCAACTGAAAAAGTCATCAACAATAAAGTTGTATAACTCATCAAGATCTATAACTTTTATTTTGGTTATTTCTTCATCCGACAAAGTGGTAGTAACATTGTTCACAAAATTCACATATCTCTCATCTGGTTTTATAAACTATAACACATATATGTAAATTTTGTGAATAATGTTACTAACACTTTGTCGGATGAAGAAATGGTAAACATAAAAGTTATAGATCTTGGTGAGTTATACAACTTTGTTGTTGATGACTTTTTTAGTTGAAATC

Explanation	CPC Score
noncoding (weak)	-0.26765

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa07LNT0527800.1	osa-miR821a	Cleavage	1.0	11.53	1	24
Osa07LNT0527800.1	osa-miR821a	Translation	4.5	11.297	1	24
Osa07LNT0527800.1	osa-miR821b	Cleavage	1.0	11.53	1	24
Osa07LNT0527800.1	osa-miR821b	Translation	4.5	11.297	1	24
Osa07LNT0527800.1	osa-miR821c	Cleavage	1.0	11.53	1	24
Osa07LNT0527800.1	osa-miR821c	Translation	4.5	11.297	1	24
Osa07LNT0527800.1	osa-miR2931	Cleavage	4.0	11.748	1	20

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa07LNT0527800.1	7	hwd2	Physiological trait	Lethality	nan	nan
Osa07LNT0527800.1	7	gp7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0527800.1	7	gw7	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0527800.1	7	tp7b	Morphological trait	Culm/leaf	R1440	RG128
Osa07LNT0527800.1	7	yd7a	Morphological trait	Panicle/flower	R1440	RG128
Osa07LNT0527800.1	7	dth7.1	Physiological trait	Flowering	RM125	RM336
Osa07LNT0527800.1	7	qah7	Physiological trait	Flowering	R2401	C1226
Osa07LNT0527800.1	7	nan	Resistance or Tolerance	Insect resistance	RG773	CDO59
Osa07LNT0527800.1	7	qHd-7	Physiological trait	Flowering	RM125	RM432
Osa07LNT0527800.1	7	nan	Physiological trait	Flowering	R2401	R1440

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore
Osa07LNT0527800.1	osa-MIR821a	91.273	275	1	274	7.08e-104	374
Osa07LNT0527800.1	osa-MIR821c	90.637	267	1	266	8.93e-98	353

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus