>Osa02LNT0141400.1

GCTCACAAAAAGAATAATATATGTATTTTATTTCCCTAAAGAATGATGAATATATATGATTAGCAGTTGCTATCAATCTTGGCTGCATGGCCAAAATACAATACTCTCCTATGGTAAGCTAGCTAGAACTGCTAACCAGTCTCACTCACACACTATTGCAAAACAAGATGAACACTCGCTCAACTGTTTGATGATGAATATAGAAGCTAACAAAATTTGTAATTACTAATAATTAAACCTTTAATCACTAGCTACTTTGCTAGTAGTAATCCGATCGAATTCTTCTTCCTCCTCCTCTTCTTCTTCTCTCGTTGCACTGATCCAAAAAAGTTGGATTTCTGGCAATGGCCAATCAGGATTTCATTCTACCCGCCTCATCCTGCTCGCCGCGCTGCCGCCTTGTCACGCCGGATCTGTTGCCGCCGGAGCCGCGCCTCCGCGGTCATCGCCGCCTTGCACGCCATCGCCGCCCGCTTCTGTCCCAGGTGGTACCACTCCGCCGCCGCCGCCGCCGCCGCGGCCTTGGCGGCGGCGACGGCGACGGCATCGTCGTCGTCCTCCTCCGGCGCCCGCGCCGGCTCGTTCAGGTCCAGCACCGGCGCCGGCCGGACAATGTCGGCTGCCGCCGCCGCCGCCTCCACCCGCCGCTTCCGATTCACCTCCTCTTCCTCCTCATGCTCCCGCTGCCGCTTCAGCTGCAAATAGTAAAAATGAAAAAAAACGTAAAAAAAGAGAAAATGAAAAAAAAGTAAGATGAGGTTGACTCCGACTCAATTGGGGATTATTCGGAAAGGTCGCATCTTTCTTTCCATTTGGACTGGTTGCCAACCATGCCGGGGTGTCAGGTGTGTGTCCACGCAAACACCTCGACCAAAGAATTGAATTGAAGCGCAAGAAAAGAGTAGCACTAGTGAAGCATTGACCTTATCATCTATCTACAACAACGATGAATCGATCGAACATAATTTGTTTTTACGATTTTAGAGGATGCAAAAATTGGAGATGAATCGATCGAACATAATTTGTTTTTACGATTTTAGAGGATGCAAAAATTGGAATATATGTAGCTGTAAATTTTTTTACCTTGCGCTGCATCTGCTTCAATCCGTCATTGGTGCTCCTCGAGCTCTGCAGCCGGACTCTGTACTCCTCGATTTGCTTGGATAGATGCGAGTTTTCCTGCGACAAGCTCGCGACGACGGCGCGCTGCTCCTCAACCCACTCCGCGTGCGACGCCGGCGCCTTCCTGGGCGGCGCCGCCCTCGCCGCCACGTCGTCGCCGCTGCTCTCGTCGGGGACGAGGAACGCGAGCGGCGTGTCGGGGCTGGCGGCGGCCTCGTGTCGCCGCCCCACGTCCGCGGGCGGCGCCGGCTTCTTCTCCCCAGGCGTCGTCCTCGGCCGGCGACATCCCCACGAGGGGATCTCCTCGCGCTGGACGCGGCGTCTGCGGCGGCGGCGATGGCGCGCGCGCACGAGGTCGGCCAGGTCGCGGAGGATGGCGGCCACCTCGTGCTCCTCCTCGGTGAACGCCTCGACGACGACGCCACCGCTGCTCGCCATGGCGGCGGCGGAATCGGCAGCGAGAGCGGAGGAGAGATT

Explanation	CPC Score
noncoding (weak)	-0.686922

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0141400.1	2	1124031	G	C
Osa02LNT0141400.1	2	1124034	C	G
Osa02LNT0141400.1	2	1124516	C	A
Osa02LNT0141400.1	2	1124759	G	A
Osa02LNT0141400.1	2	1124825	C	G
Osa02LNT0141400.1	2	1125159	A	G
Osa02LNT0141400.1	2	1125236	C	G
Osa02LNT0141400.1	2	1125298	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0141400.1	osa-miR5530	Translation	5.0	20.898	1	21
Osa02LNT0141400.1	osa-miR5143b	Translation	4.5	17.92	1	24
Osa02LNT0141400.1	osa-miR1846d-3p	Translation	5.0	19.408	1	20
Osa02LNT0141400.1	osa-miR2093-3p	Cleavage	5.0	17.896	1	20
Osa02LNT0141400.1	osa-miR2871a-3p	Cleavage	5.0	11.265	1	21
Osa02LNT0141400.1	osa-miR2871b	Cleavage	5.0	11.265	1	21
Osa02LNT0141400.1	osa-miR2875	Translation	4.0	16.522	1	24
Osa02LNT0141400.1	osa-miR2919	Cleavage	3.5	12.272	1	19
Osa02LNT0141400.1	osa-miR5082	Cleavage	5.0	23.172	1	24
Osa02LNT0141400.1	osa-miR5143a	Translation	4.5	17.92	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus