>Osa02LNT0141800.1

GGAAGTTTAAGCATCTCATATCAAAGCGGGAAAAGAGGTGTAAGCTAACAACACGAGTTGAGATCCACAAAACATTGTTCTAGAGCTAGCTAGTACACGAATCGTCTGCTACCAATTACTAATACAACTTTCAGAGAGACAACATCAGCAGTTCAGTACATAATAATAGTGCGTCCATTGATCTGAAGCAGGAAGGTGCAGCGCAGGCATCATGTGGAGCAACTTCATTCTCTCTCGTACCTCGCAGGTGAGCGACTGCGGGGCCTATCATAGCCAGGGCTGGCTTCACGGCGTTCACGGTCGTAGTTGTTAGGGGGGCTGCCCCTCTCATCACCTTTGTTGCCCCCTTGCGGACTTGCACCACGGTGATAATCAGGGCTACCTCTGTCACCACCCCTGCCATAGTCCGGGCTGCCCCTCTCCCTGCCTCTTCCATAGTCAGGGCTGCCCCTCTCACGCCCTCTGCCATAAGGACTTGCAGACCGCCCGCGATAGTCCCTCCTGTCTGGAGATCGATCACGGCCTCTTCTTTCTGGGCTGTATCCATTCCTTTTCTCATCATCATCACGAAGTGCATATTCCACAGAGATAACCCTGTCCATAAGAGTGCTTCCATTTGTACCCTCCAGTGCTTTAGTAGCATCTTCCTGTAACTCATACTGGACAAAGGCAAAGTTCCTTCTGATTCTGACATTCGAGATCTTGCCATATTGATCGAAGTGCCTCTCCAGATCTCTTGTCCTTGTGTTGATTGGATCAAAATTGATCACAAACAAAGTTTTGGTTGGCCTTGTATTGTTTGGAGATCTCTTTGAGTTCCCTCTTCTACCACCACTGCGATCCTCCTTTGTCCATTCAACCCTAAGTCTCCTCCCTTTTCTGCCAAATTCAATTCTGTCAAGCCTATGGATAGCTTCATCAGCATCACGTTCATCTTCCATGTAGACAAAGGCAAACCCTTGCATATGTCGAACTAAATGACGTCAATGTACATTAATCCAAACATTCGTGGTACATCAAAGAGGTGGTGGTGGCAACCTCCACTCGTCTCCAGCCGGCCGTGTGGTTGGCATGGTTGGATTGGCGTGGGAAATTGTAATCGGACGGGGGAGGAGAGTGCAACGCAGAGGAGGGTGCAATGCTGATCGTAAAAGTAAGGCATCATTCACGAGGTGGTTGTTTCCAAGTGAACAGATGCCAGGATGGACTCTGAGCTCCTGGAGATGGACAAGAGATGAGCGGGGCTCAGGCAGGAAAGGTAGAGCCCAGTCCATCATCCAGGAAGAGCAGAGATGCTCCATGATATCCTGCGGCAAAGAAATAATTGAGTACTGGACCTAAACTTAAAGAAATAACTTCTTTTTTTTTTCTAAATGTACCCTGATGTGCACTTGTCCAATGTTTTGATAATTAACATTAAGATAATCTGGTCCTGCTGAAACTTCTTTTGCTTCACAGTGAATGCAAAATAACCTCATGCATTTCACATCTTACAACAAGCTGCTGGCTGCTGCACCAGGGAGCGTGTTGAACGAAATAAGTCAGAGTCTCGCATCAAGGATATAGCAGTGAAACATGCTAGCCCCTGCTATATCAAATGGAGTACCCACTCGCTTTTGAGACTCATGTACTTACGGTGCAGTACATACTACAAACAGTTTCAGGTTAATAATCAAACAGTGAAAAAAAGGAGGAAAAAACATATCAATTTTTAATCTGTACACCATTTGAACCCATGAGTGTTTGCAACAATACGATTCCACAAGAATTATCGTATGAATCTACCTGGATTAACAGTTTAGCAAACAAAATAGGAAAAGTTAATATGGAAATTTTCATTTTAGTGTGAAATTCATCAGCAGCCACTTGTCAGCTGACTCTTTTAAAAGCCTCTGTTGCTGGCTTGACCAGTCGAATTCTTTTGATGCGAAACACCAGATAGGTGCAATATGGATAAACAAATTTGAAAACAGTGCAGCTTAAATTTAAGAAAAAACAATTGAGAGCAACTGCCTTACCCGACTTCATGTCAACACGCTCCACACGTCCATATTTGCTGAAGAGGCGCTCAATCTCAGATTGGCGAGCATCATAGTCAAGGTTTCCACAGAAAACTGGCCTCATTTTAGGACAAGCAACTCTTCTCAAACCTCCGGGGATAGACGAAGGGAGGAGCGGGCGGCGGCGCGGGGGAAGACGACGACGACGAGGACGAGGAAACCCTAGGTCTCCTCCTCCTCGGGGCGATTGGTTCGGGCGGCGCCGGCGAATGGAGAAGCGGAGAGGAGGAGAGAGTGGGGATT

Explanation	CPC Score
noncoding	-1.32969

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0141800.1	2	1193522	G	A
Osa02LNT0141800.1	2	1193764	A	G
Osa02LNT0141800.1	2	1193825	T	C
Osa02LNT0141800.1	2	1194786	C	A
Osa02LNT0141800.1	2	1195905	T	A
Osa02LNT0141800.1	2	1196704	T	C
Osa02LNT0141800.1	2	1195184	T	C
Osa02LNT0141800.1	2	1196533	C	T
Osa02LNT0141800.1	2	1196079	A	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0141800.1	osa-miR5807	Cleavage	3.0	18.383	1	24
Osa02LNT0141800.1	osa-miR156j-3p	Cleavage	3.0	22.162	1	22
Osa02LNT0141800.1	osa-miR394	Translation	4.5	19.851	1	20
Osa02LNT0141800.1	osa-miR172b	Cleavage	3.5	15.449	1	21
Osa02LNT0141800.1	osa-miR528-5p	Cleavage	2.5	21.946	1	21
Osa02LNT0141800.1	osa-miR2095-3p	Cleavage	5.0	20.869	1	20
Osa02LNT0141800.1	osa-miR1862f	Cleavage	4.0	13.616	1	20
Osa02LNT0141800.1	osa-miR1862f	Translation	5.0	14.711	1	20
Osa02LNT0141800.1	osa-miR1862g	Cleavage	4.0	13.616	1	20
Osa02LNT0141800.1	osa-miR1862g	Translation	5.0	14.711	1	20
Osa02LNT0141800.1	osa-miR5161	Cleavage	4.5	18.709	1	20
Osa02LNT0141800.1	osa-miR5161	Translation	4.5	20.347	1	20
Osa02LNT0141800.1	osa-miR5486	Cleavage	3.5	21.386	1	21
Osa02LNT0141800.1	osa-miR5492	Cleavage	4.5	13.994	1	21
Osa02LNT0141800.1	osa-miR5492	Translation	4.5	16.678	1	21
Osa02LNT0141800.1	osa-miR2275d	Translation	5.0	17.448	1	22
Osa02LNT0141800.1	osa-miR2275d	Translation	5.0	24.838	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus