>Osa02LNT0142800.1

CAATCTTAATTTAATTTCTCTCTTCATCATCATCTCGCTCTCGATCTCCTACAGAAGCTACAATAGCCAGCAAATCAATCGATCGATCGATACGTGCAATGGCGGCCATGAAGGTGAACAAGATTGCCGTGGCGGCGCTGTTCCTCGTCGCCGTGGTGGTGGCGGGCGGCGCCGGCGCTAGCGCCCACGTCGGGGTTGGGGCTGGGGCCGGGGCCGACGCCGGCGTCGGTGCCGCCGTCGGGGCCGGCGCTGACGCCGCCCTCGGGGTTGGCGCCAACGCCGCCGGCGCCGCCGGGGCTGGAGTTGGGGCTGGAATTGGAGCCGCCGCCAACGTCGCCGGGTCTCTCACCGGCGCCGCCGAGGGCGCCGCCGGCGTGGCACCCAAGGTGCATGTGTGAGATCGATCGATCCATCGATCGATCGAGCGCGCGGCGGCGTCATCTCCACTACTCCATCCGCCCGTAGCAGCGCCGGCCATCGATCCACGACCATTCGCCGTCCATTGTTTTTGTTGTTAATAATCAAAGTTTGGTTAATTTAACCGTCAAGTGTTTGGTTGTTTATTTTATACTCCATCCGTACTGATAAAAAAATCATTTAGAAGAATGTTTAATTCAAACCTTAGGAATATAAATCATGAATAACTCTCAAGTTGTTGAGTTTGAAAATGTAAAAATTATATGAATAAATTTGTCTTG

Explanation	CPC Score
noncoding (weak)	-0.0909315

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0142800.1	2	1420651	G	A
Osa02LNT0142800.1	2	1420573	A	C
Osa02LNT0142800.1	2	1420811	A	G
Osa02LNT0142800.1	2	1422091	A	C
Osa02LNT0142800.1	2	1422465	T	C
Osa02LNT0142800.1	2	1422688	A	G
Osa02LNT0142800.1	2	1422728	G	A
Osa02LNT0142800.1	2	1422736	T	C
Osa02LNT0142800.1	2	1422945	C	T
Osa02LNT0142800.1	2	1423049	T	C
Osa02LNT0142800.1	2	1423058	T	C
Osa02LNT0142800.1	2	1423208	T	A
Osa02LNT0142800.1	2	1423231	G	C
Osa02LNT0142800.1	2	1423376	G	A
Osa02LNT0142800.1	2	1424362	A	G
Osa02LNT0142800.1	2	1424159	G	A
Osa02LNT0142800.1	2	1421878	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts
Osa02LNT0142800.1	DTM_#DNAt_MULE_japo_Os0086	Chr2	+	1421522	1421950	428

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0142800.1	osa-miR812s	Cleavage	4.5	17.012	1	24
Osa02LNT0142800.1	osa-miR5799	Cleavage	4.5	17.012	1	24
Osa02LNT0142800.1	osa-miR1423-5p	Translation	5.0	16.907	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus