>Osa02LNT0151700.1

TTTTAAATATACTTTTCAGCGTATAATAATTAATCCATCCATTTGTACCCTCGGATCATATATCTATTTAACATTCTAATCCATCTGGCCTAAAAGAACACGACCGAACTCATCCAACACATAAAAAATAAAATATCACATACTCCCTCCACGTGACAGGAATTATTCTTAAAAGTACATTTATTCCAACAGCCACAGGCATCACTCCACCAGCAAAGACCGGACGAAAAATGGTCCAGGAACATATTGCTGATAGTATTTATTGGTATGCTGATCACCATAGATCATACAATGCTAGCTCGATTGGGATTTGGGAAGGACGAAGAGTGTCCAAAGCTTGCAAAAGCTAGCTCCATCCATACTTGTAAGAGATCGAGTCTCTTCTCGATCACCAGGTCTCGACTCCAATCAGTAATTAATTACTTCACGGCGGCGTGCCCGAGCCAGATCCTTCTTCTTGTAGCCGCCCTTCTTCCTCGAGCACTCGCCGAGCATCGCGCGCGCGCGCGGGCGTTGTCGGGGACGAAGCAGAGGGCCTCCTTGAGATCGGCGGCGGCGCGGTCGAGGCGGGCGGGGCAGGGGAAGAAGCAGCGGCGGTAGTAGTCCAGGTTGATCTCCGCGCGCTTCACGAGCGCGTCCCCGCGCTCCCGCGGCGGGAGGCGGCCGGCGAGGGCGCGGAGCGCGCGGCGGCGCTGCCCCAGGGCGTCCAGCGCGAACGCCCTGACGACGAGCAGCAGCGGTTTGTGGAGGCCGCCCCAGG

Explanation	CPC Score
noncoding (weak)	-0.858491

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0151700.1	2	5818429	T	A
Osa02LNT0151700.1	2	5817879	A	G
Osa02LNT0151700.1	2	5817912	A	C
Osa02LNT0151700.1	2	5818309	A	G
Osa02LNT0151700.1	2	5818491	C	G
Osa02LNT0151700.1	2	5818578	T	G

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0151700.1	osa-miR2095-5p	Translation	5.0	3.795	1	22
Osa02LNT0151700.1	osa-miR2873b	Cleavage	4.0	21.015	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0151700.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0151700.1	2	qEML-2	Morphological trait	Seed	R2344	R712
Osa02LNT0151700.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0151700.1	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus