>Osa02LNT0153800.1

AGCAGATTTTGGGGCTGGCAGCGCAGCGCGCCCACTGCGCGCGCCTCCGTACGTACGCGGTATATATGCGTACAAAGGAGACAGAGGTCGACAACGAAAACGCCCGTTTGGCGAGATCGTTGATCGATCAACCTCTGAGCTGTGTGGGAAGAAGGATACTGATGAAGTAGGAGAGAGCTGGGACTGGAGCTCTTTTGGTATTTTGGAGAAGCTAGCACCTGGGTTTGTACCATCTCGACGAAATGACGAGCAGATCTCTGCACTGAACTTTTCGCCTCGGTTTGCGCAATAATCTGTCAGGCATGGTTCAGTTGTGAATCGTCATATCCTCAGACAGAATGCAGAAGTTGTCTTCGTGACATTGGATCTAGACCCTTTATGATTTATCCGGAGTAATCCCTCCTGCATAAATAAAGATACAGAGTGCAGGCTAAAGTACAAAAACCCAACTGAGAGGTGTTCATGGTGAATTAGGCTTATCAGTGGCACCCAAGTGAATAAAATGTTCTATACACAACAGGCATTGCCAAGAATCACTTCTTTTTTCCAATCTTGCAAACTTCTCTTCATTAGGACAAAGAAAGGCCTAGATATTTGAGAAAAGTTGCGCTGCAGTCTCCAATTGTCAAACATCTTCTAGGAGTAGGCAATACCAAGTTTATCATCAAGAAAAAGGAGGCCTGCAACAACTCATCTCCGCCCGCCGCCGGCGACGCCGCCGCGCCGCCGCGTCGCCGCGCCCAGAGAGCACAGCCCAACCCGACGCCGTGGGAGAAGCAATAAT

Explanation	CPC Score
noncoding	-1.02082

Transcript ID	Chromosome	Locus	Ref	Alt
Osa02LNT0153800.1	2	6711542	A	G
Osa02LNT0153800.1	2	6711634	A	C
Osa02LNT0153800.1	2	6712740	A	C
Osa02LNT0153800.1	2	6714142	T	C
Osa02LNT0153800.1	2	6714390	G	A
Osa02LNT0153800.1	2	6714953	A	G
Osa02LNT0153800.1	2	6715519	A	C
Osa02LNT0153800.1	2	6715798	T	C
Osa02LNT0153800.1	2	6716065	G	A
Osa02LNT0153800.1	2	6716578	G	A

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0153800.1	osa-miR2120	Cleavage	3.5	20.149	1	24
Osa02LNT0153800.1	osa-miR5144-5p	Cleavage	4.5	13.316	1	21
Osa02LNT0153800.1	osa-miR5504	Cleavage	5.0	10.342	1	21

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0153800.1	2	tms5	Physiological trait	Sterility	nan	nan
Osa02LNT0153800.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171
Osa02LNT0153800.1	2	qLER-2	Morphological trait	Culm/leaf	R2344	R712
Osa02LNT0153800.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0153800.1	2	qEML-2	Morphological trait	Seed	R2344	R712

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus