© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0161800.1
GGGCAAATAGAGAACATCTCACATTCCGTGGAGAAGGCAACCAATCGATCATTGGCCCAATCGAGAAAATCGTTACATAGTTACATCTGCCGGCCACTGTTATGTACATTCATTCCGTTAAGAATCACCTAATGTTGTGCGGACTCTCCCTAGCAAATGAATATGATGCAGCCCCTCGTATTGACAACCTGCGGTATAGAGATCAACCCGTGCATAATAACTAGTCCTACAAATCACAGATTAAAAATTATATATATAGCTACAAATGGAGCAAATCTAGATAGAGCCGCATAATTCCATGTGTGCAGTGTTGCTATTTATATTTGAAGATCATCCAGCGTCAGTTCATCGACTGACATCATCTTCAGTTTCGTGATGAACTGGGGAGGATCATCCAGACTAGATGAACCAAGTATGACTTCCCGCTTTAGCTTGGATGTAAGCTTGTGCACAGCACGTAACTCCGACCGAGTGGCGCCACCAATGACAAACACAAATATACGCTGACCAAGCTTTTTGAAGTCACTCGACGAATGCTTCAGCACTGAATCACTTGAATACCCATCATCAGAGCCACGTGGCCGAGCCCATGTACCACCTGTCCGTCTGGATCTCATAGAATGAGCTGGTTGGTGAGCTGGGCTAGTTCTGACTGAGCTGCTCATTGGCAGACCGTGGAAACTTGGGCTAGGGTCGTTCATGCAATAGTATTCGTCTTTTGGTAATTCTCCCTTGCTAAGCTTCTCAATCAAGTCCTCTAGAACAGGATAAAATCGGGAAAGTGCCCATGTAGATTCTTCCCCAGTTCGCTCCTTTCTAAGTCCATGCTTCTTCTTGTGAACATCAAATTTAAACGTAAAACCTCCTCCCGAGGACTTTTTGGTGTCAGGGCCACATAAGCAACGCATATTACTCACAGCAATCATGTCATCAGTGGATAATCCTGCCAACTGCATCAATTTTTCACCCTTGTCACTTTCGAACTTGTCTGGGTTGATTGCTGCATAGATCATCAGCAAACGCAACTTGTTTTCACGACTTACACCCAATTGTGTCCTCAAAAAATTGATTAATTCTTTAGTTCCAGCATCACCAAATACAAGATCTTGCTCTAGCTGTCCAACATCTCGAAGACCTTGCTCCCTTATTATGCTATTGAGTTTACCTGCAATCTCAACATGAAGAGAAAGCTTCTCAATTTGATCGCTGTACTGTGGAAGAGCTTGAACCATTTTTTGCAAATCTCTATTGGATATCTCTCCCCCAGTTCTTGCTTGCTGCAGTTGAGCAGCTTTATTCTTGGACACAAAATTGCTCATCTTGTCATGCAGTCTTTCGCTTGCATCTGCTATGTGGGCATGCCGGAGCTCAACCCATATTGGATCATGATCCTCCAATAGGACATCCTTCTTTTCAGTTGATGAACCATTTTTACTCGGAACCTCATGGACATACTTGTTGCCATCCATACATAGAAGATCATGGCACATCGCGTCATATGTCCATTCATGAATGATTGGTGCAATCTGGTCTACTGAACGATCAACTATAAGTAGCTCACATGTCTCAGTTTGAGGATAATCCGGTATTGATGTTTTCAATTTTGAAAGGCAATTCCAAACAGCAGCAGCAAGTTTTGTAGGCACTAAATCTCGTAGTGTTGTCGTTACAGAAGCATCAATTGTCTTGGCGACACGGTAGTGCACTCTAGGGAATTCCCTCATTGATGCAAACACTGTAGATATGCGAGTAGCCATTGTGTTCAAACAAGCATTGTACTTGTGTGAATCCAAAGCATTTTCACTAAAAAGCTCCTCCAATGCTCTTTCATGGTCAGTGGTGAAACCCTGGGAATCAATAGCAAAGTACTCCAAATTCATCTCACTAAGTGCACCAATACGGGGTAGTACACTTGAATCTTTTTTTATTTGAGTAACTAATTCTTTCTGTATGGGAGAACTGAAAAACACATACGCCTTCTTGTATAACGGATTTCTTCCGGACATGTCATTCAGGAACATCCCAATGTTTTCTTTAGTTGGTTGAATGAAATATATAGCATCTAGTGAAGGCAACGGTTGTCTCCGTTTGTACAAATCTTCAACCAATGAAACCCCTTCTTCTGTAATATCTGCCATCTTACATGAACATGATATTATCTTGACTGTAAGTTTATCCATAATAAGAACCTTCCATGTTGATTTTGAATGTTTCCTAGTTGACCTGAGCATTTCAAATAATAAACGGTCTCGCGTGATTTGGCGGAAGCTCCGGTGGTCCCCGCCCTGGGAGGAGGTGTCCGAGTCCATCGACATGGCGCCGGAGATCTCCCCCGCCTACTTCCGGCGACGCCGCCTCGGGCTGCGCTAGTAGGGTGGAGAGAACCACTAGCCTTTGACCCGCCCCGCGTAGAGGAGGCGGTGATCGGCGGGCGGCGAGCAAGCAGAAGAAGGGGAAGTCGGAGAGAGATCAGAGGGAATGCTCCGTGTGGCCGCGTGCCGGAGAGAGGAAGAAGAGAATTGGGGGGAGGAAGCGCGTGCGCGTCTCCAAGAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0161800.1 | 2 | 14954915 | A | G |
| Osa02LNT0161800.1 | 2 | 14943284 | G | A |
| Osa02LNT0161800.1 | 2 | 14943943 | C | T |
| Osa02LNT0161800.1 | 2 | 14944936 | G | T |
| Osa02LNT0161800.1 | 2 | 14946101 | A | G |
| Osa02LNT0161800.1 | 2 | 14946289 | A | G |
| Osa02LNT0161800.1 | 2 | 14948450 | C | T |
| Osa02LNT0161800.1 | 2 | 14950026 | T | C |
| Osa02LNT0161800.1 | 2 | 14951725 | A | G |
| Osa02LNT0161800.1 | 2 | 14958324 | A | G |
| Osa02LNT0161800.1 | 2 | 14958620 | C | G |
| Osa02LNT0161800.1 | 2 | 14954578 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0161800.1 | osa-miR5796 | Cleavage | 5.0 | 15.787 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395b | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395d | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395e | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395g | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395h | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395i | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395j | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395k | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395l | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395s | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395c | Cleavage | 5.0 | 16.516 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395a | Cleavage | 4.5 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR399a | Cleavage | 5.0 | 10.547 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR399b | Cleavage | 5.0 | 10.547 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR399c | Cleavage | 5.0 | 10.547 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR171d-5p | Cleavage | 4.5 | 22.884 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR171e-5p | Cleavage | 5.0 | 22.884 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395m | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395n | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395o | Cleavage | 4.5 | 16.516 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395p | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395q | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR395r | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR1874-3p | Translation | 5.0 | 18.23 | 1 | 24 |
| Osa02LNT0161800.1 | osa-miR2870 | Translation | 5.0 | 14.436 | 1 | 21 |
| Osa02LNT0161800.1 | osa-miR2930 | Cleavage | 5.0 | 21.346 | 1 | 22 |
| Osa02LNT0161800.1 | osa-miR395y | Cleavage | 5.0 | 11.968 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0161800.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0161800.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0161800.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0161800.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Osa02LNT0161800.1 | 2 | d50 | Morphological trait | Dwarf | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)