© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0162400.1
AGGGATAGTACAGCAGGAATTTCGACAGGATGAATAATGCAAAAAAAAAAAAGACAGGATAAATAGCACAAAAATTTACATAGAAATTTGGCCTTTCATGGATCCATTTTTTATGTTGATAATAGCATAAAAGCAGTCCACTCAAGATGGAGTTAAACGCCATAGATGCAATTGTAAATTGAGATTTAATTTTCTACCAAGTTTGTGGTTTAGCTAAAGCACTAAAGCACAAACTTACCCTTTTTGAAAATAAGCAATAGTATGAAAAAGCTTACAGCTGCTTTCACGAATTTATACTGTAAATCTGGTTCTATGACTAATTAAGCATACTCTACAAACAAAAGCACGACGATTATAAAACAGAATAGTACAGTAGGAATATTCAAAAATGAAATTTCAGCTTTGCATGGCAGCAACCTCACCCTCCAGCTCTGAAGTTTTTTTTTTTTTTTTGCGATAGTCCAGCTCTGAAGCTTTGTGGGAGGAACGAAAGAATATTTCATTATATCAGTTGTTTTTGGAGAGCTTGGCCATCCCTGGGCAATAAGAACTTGGTTGCTCGTTTCTGAGGAGCTGAAATGAAGTGAAGCAGAGACATGCCAATTGGCCAAGTGAGATCCCCTCCAATGTGAAGCAGATACATGACAACTGGCCAATTAGCCAAGTGAGATCCCCACTAATGTGAAGTAGAGACATGCCAACTGGTCAAGTAAGATCCCCTCCAATTATTCAGGTTGTACTTTCAATTCTTTTTTAGTAGTAAAGGGCACATGAAAGAAAAAAAACGTAAAGAAGATCATCTCTTCAATGATGGTATTATAAATAGTGAAGGAATGCTACATTACTTACCAAAGCCATTCATAATTAGATAGCTTACATATAATCCAGTTTTTGTTTAGGCTTAAGAATATTATTAAAAAAATGCCATACTAACGAAAATAGTTTAACATTTAGCCTATAAAACATAATCTGATAGTTTTCTTCTGTTACGCTGGTAACATTTTATTACAAGATAAAAAAGAACATTTTATAACAAATAAATCCTACAATCTCAGCAATAAATACTATATTTTGTGGCATAAATTTGCTTCTAGTCAAGATAACAGTCACGGATTTGACTTAACATCTTGCACAATATCACAAAAAAATATTATATTGACCAATAGAACCAAACTTGTCACTTGCAATTTTCACTAATGAAAATCTACAATTCTGAGCAATGAAAAATCCAAGCAACTTTAACACTTGAACCACATCAATAAAAAAATGATATAGAAACTTTGAAACCCACCTCGGCAAGACCACCACACCACTTTTTATAACTTTGCATGATCAAATTGTGGACAAATGCAATACAATACATTATTCATTGCCACATGCAAGATAAATATGGGGGTGGCCAGTAGCATCTAGAAAACAAAGTAACAGATCTCATTTTTATATGGGTTAATTGGATCCATGCCACTACAAATACGCCATTTTAGATAAATGTTACTACTATTTACGATATCGGCTACATGCTACTGGAATTTGGGGAAATTAGAACCGTGCCACTCCATCGCGTTTTCCGTCAAAAATCACCGTTAGCCTCAACTGCACGTGGGGAAGAAACAAGAGGGAGGATGGAGGAACTATCTTTGTCTACCCCTCTTATTTTCAAAGAAGTGTTGTTATTGCTATCAGTCAGTCTAACAGCCATCATGTCCATTTAACAAAATATAAAACAACCCAGATATGAATCGCTTTGTAAATTCAACTCAAGCAGATTAACAAATCCAAATTCCAACTGAACTTGCAGATAAGGAATGAGCAAGTAATAATAAGAAGAAAAAATTGGTTTAAAGGCATGTTGCCCATATTTAGAGGGAAAAAAGTGAAAATGTCTTCTAGCTCTAGTCATTCCTCTCCGACCAACTACTGTAAATAGTGCATAATAAAAAGATAAATCCAATGAAATATATTACTTGTGCAACCCAACATCAGGATGGCCTCAATTCATTCATCGCGCCTTGTATATATCATCTAATTCATTCATATCCCTCAATAATTAACATCCATCATTCAAAAAAAAAACACCCATGTAAAAAAATCTATTGCACTCCTAGCACTGCAATCAGCATACATGTGTACTGCATTTTGTTCTATTGCACTCCTAGCATGTCCACTTTGTTAGCTGTGTGCTTCAAAATCTTAGGTGCTGGCATTTTCAGAAAATAAACATGAAGCATCATTGCCATGTGTAGATATAAGAAAAACAAGGGCAACAGATGATTAAATATAGTTGTGGTTTGCACAGTATTAAGGATTTAAGGTGGGGATTTCTACCAGATCATTTGAAGTGTGCCTCTGAATTTGCTGAGTTTGTTGCCTAGTTAAAACAACAACAATTAGGCATCACATTCATAAGTTGTTCCACTTTGTTTATCATATACTTCAAACCCTCCTATAAGATTTACAGCAAATGAAAGCACACACTATACAACAATAATTTGCTTCTGTAGAACAGAAATAGCATATTTCAGAAAAATATAGGTATTATAGTTCCAGCTAATTAAGATGAGTTAATCAGGATGTTGATGGTACTAATAATGACATACCTGATAATGTCTAAGTTGATTCTCAAATGTTTTCATGACCAAAGGCTGACAGTGTTGTATTGGCATCCAAAGTTCTTACTCTTAGTTTTGTACCATCCTGAGGCATTTCAATTTCTTGCCAGTTATTTATCTGCACAAAATTGGAAAGCATAAAAGAAAATGCAGACAGAGAGCATCAAATAGTACACTCAATTATCACATAACCTCATCTACTCACAGAATTAGTTCCGCATTCAGCCTATAAAAGCTCGCCCTATGTTTTTTCCCCTATTGAGGTAGTAAAATGATTATTACAAATGAAATTTTCATCATTGTAAGAAGATCCTGTGGTAATTTCTATTTATCCCTTGGTTGTAGGCCAATTGAGCAAAAGAAGGCATAGGATAAAAAGTTTTGCAACATGAAAAAGGGATCAGTATAGCTGATCAGCAACTGTTTGGGGTTGAACAACCCTACCTTCCTTCCCAAAGAATAAGAATCTCCAAAGGATCAGCAATTGTCTTCTAATTATATCCTCTGGCCAACAATAAGAATCTCCGAAGGATAGAATACTTTTCAAGCATAAACATTCATGATTAGTGTTCAACTGTTCAGTAGCCACCAAATCCCAGTGTACTACTGAATCCAAATTCAGTTTCCTTTTAAATAAACAGATGATATCTATGTGCATGAAGGTAATCAAGAGGTCTGATGGCAAACAAAACAGCAACATCTACTGCTAGCCTATCTAAACTACAGGAGAACATATTGCCAAATACTTTTTGTACATAAACAATTCAAGTCGAGTATTCACCTGTTTGGTAGTCACCGAATCCAAATTCAGTTTTCTTTTTAAATAAACAGATAATATCTATGTGCACCAAGGTAATCAAGATGACTGATGGCAAACAAAACCAGCAGCATCTACTGGTATGCAATTGCCGCTATGCTGTGGAGCTTCATTGGTGGCTCTTGTGTGAGAGGCAAAGCAACTGTAGATGGTCGACCACCTCTTAAACTTTTATCCGCCGTACTGTCGATGAGCCTCCTGTGCTAGCCCTACCCTCGCCTCCGGGTGACCGGATCCGCCGGCAAGGAGGTCGTGGCTACCGAATCCGGCGGGCATGGCCTACCCTCCGCCGGAACTGGCCCCGCGGTGGCAAGGGGAAGGTGCGACGATTTGGCTAAGTGTGAGAAAAGTGGTCGGCGGCGGCGGCACGGGGGGGTGAGGGCGCGAGGAGGCGGCGGCGGTGTGGTCTAGGGGAGAGCGAGCGAGAAGAGAGGTGCGAGGGAACGGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0162400.1 | 2 | 15445744 | A | G |
| Osa02LNT0162400.1 | 2 | 15444102 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0162400.1 | osa-miR5534b | Translation | 4.5 | 10.76 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR5536 | Cleavage | 5.0 | 12.97 | 1 | 22 |
| Osa02LNT0162400.1 | osa-miR5543 | Translation | 5.0 | 17.762 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR5809 | Translation | 4.0 | 22.599 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR5825 | Cleavage | 4.5 | 21.172 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR5830 | Cleavage | 4.5 | 5.986 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR2873c | Cleavage | 4.0 | 14.12 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR2873c | Cleavage | 4.5 | 12.618 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR5079b | Cleavage | 4.5 | 17.833 | 1 | 22 |
| Osa02LNT0162400.1 | osa-miR5079b | Cleavage | 3.5 | 10.526 | 1 | 22 |
| Osa02LNT0162400.1 | osa-miR156a | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156b-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156b-3p | Translation | 4.5 | 11.163 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR156c-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156d | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156e | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156f-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156g-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156h-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156i | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR156j-5p | Cleavage | 4.0 | 15.675 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR169f.2 | Translation | 4.0 | 10.96 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR171i-5p | Translation | 5.0 | 16.063 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR1424 | Translation | 4.5 | 16.134 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR1425-3p | Cleavage | 4.0 | 14.223 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR1442 | Translation | 4.5 | 14.241 | 1 | 20 |
| Osa02LNT0162400.1 | osa-miR1875 | Cleavage | 4.5 | 15.745 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR812g | Cleavage | 5.0 | 14.231 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR812h | Cleavage | 5.0 | 14.231 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR812i | Cleavage | 5.0 | 14.231 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR812j | Cleavage | 5.0 | 14.231 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR1320-3p | Translation | 4.0 | 17.924 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR2864.1 | Cleavage | 4.0 | 13.982 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR2869 | Cleavage | 5.0 | 20.555 | 1 | 21 |
| Osa02LNT0162400.1 | osa-miR5079a | Cleavage | 4.5 | 17.833 | 1 | 22 |
| Osa02LNT0162400.1 | osa-miR5079a | Cleavage | 3.5 | 10.526 | 1 | 22 |
| Osa02LNT0162400.1 | osa-miR5153 | Translation | 5.0 | 13.341 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR5153 | Translation | 4.5 | 14.867 | 1 | 24 |
| Osa02LNT0162400.1 | osa-miR5524 | Translation | 4.0 | 17.659 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0162400.1 | 2 | d50 | Morphological trait | Dwarf | nan | nan |
| Osa02LNT0162400.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0162400.1 | 2 | np2.2 | Morphological trait | Culm/leaf | RM324 | RM262 |
| Osa02LNT0162400.1 | 2 | qSS-2 | Physiological trait | Sterility | RM301 | RM263 |
| Osa02LNT0162400.1 | 2 | nan | Resistance or Tolerance | Drought tolerance | RG83 | RG171 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)