>Osa02LNT0164900.1

CCACTTCCCGCATTGCCCCCACCAATGCGCTCCTTCCCTCCCCCGCGATCCCGGCCGGCTCCTCCAACACGCGGCCGCTGCCACCAGATCAGCGGAAATCCGCCCGCGCCCCCACCCTCAGCACCCATTCCTCCCGCTGTGCCGTCCGTTGTCGCCGTCGTCCAGCGCCACGGCCGCCGGACCGGCAAGAATCCACGCACGCCCTCACCCCCAGCGCCCCATCCCTCCCGCCATGCATAGGGCCTTCATCCTGCGTCACCGCCGCTGCCGGATCGACGGGAATCCGCCGTGCCCCCACCACCAGCACCCCATCCCTCTCGCCGTTGCTCCGTATCGCCTCACCGTGCCCTTCGTCGTCCAGGACCGTCACCCACGACACCGGCGACGAATCACCGCCATCTTACACTTCCATTGCACCGCCGCCGTCGTCGTCGTCCAACACAGCGATTCGCCCTCCGTCCTCCACGCCCACCGCGCCCTTGCGGCCATTCACGATGGTCCTGGAAGAATGCCATTGCAGCGCCCAAGCTTAGCCTCCGTCATCGATGATGCAGGTCTGCAGCACTACGTCAATATACCTACGTCCATGTCCCGCGCGGCTCATCGCTGCCAACCCCGCCGACGAGGTAACTAGATTTAAAGCTCATTGCTTTGGTTCGATGGATTGACGGCCGGGCAACATGGATCTTAGTTCTTCGTACCGAAGGTTCCAGCAGAATGTTGTTGATCGTGATCTTTGTTAACACAGAACCCCAGTTACTACTACTTTCGTTACAGAGATATACCTTTTGCTTTGGCTCCAGC

Explanation	CPC Score
noncoding	-1.20411

Transcript ID	Chromosome	Locus	Ref	Alt

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa02LNT0164900.1	osa-miR812q	Cleavage	5.0	16.695	1	24
Osa02LNT0164900.1	osa-miR5819	Translation	4.5	13.649	1	21
Osa02LNT0164900.1	osa-miR5819	Cleavage	4.5	12.561	1	21
Osa02LNT0164900.1	osa-miR5082	Translation	5.0	21.488	1	24

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa02LNT0164900.1	2	qPH-2	Morphological trait	Dwarf	RG324	RG83
Osa02LNT0164900.1	2	np2.2	Morphological trait	Culm/leaf	RM324	RM262
Osa02LNT0164900.1	2	qSS-2	Physiological trait	Sterility	RM301	RM263
Osa02LNT0164900.1	2	nan	Resistance or Tolerance	Drought tolerance	RG83	RG171

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus