© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0177900.1
GGAGTATACTACTGTTAAGTCTGAATTTTGAATCCCGATGAGCCAAATACATGATCACACAACGCTTAGTTATCTCGTAGTGTTACATACCGGCATAATGTTTCTCCAAGGATATGATTTACTTCGGTTACATCTTGTAGGTAGGTTTGCCTCCACTAGAAAAACGTGCAGTGGGGCTGCCATCTCCCTGATTTATCGCTTCACGCCTTCACGTGCTATTTTGCTTTGTCATTTTCCTCAACAACATTTCAACCCTGTTCGACCCTTTTAAGATAGTAGAGTAAAAAATTCTCCAGCATATGCATCAAGCAATGCATACGGCCCTAATAACTAGATATATTCTTTTAGATAATATTGTAAGTACATTATTTAGAGCAATCCTTCTCCTTGGATCTTAAGTTGGGCGATGAGAATATAGCAGATGACACTCGAGGTTGCTGACTACGTCACTGCGATCAAGCTCCTCAAGATCAAACATGTTCTTCTCTGTCCAGTCCCAAGAATCCCAGTCCCCAACTTGAAGAGTTGTTTATCTCCAATGTGGCAGCATTAGTACCTCCAATCTCCTCAATATTATGGCAAATGTATTCCTGGCTGCTGTTCTTTTTAAAGTTATACTTGCTGCACGTGGAGAACTGGCCATAGCGAAGGAACCATTGTGGTGTCTTCTCTCCCATTTCTTGAACCATTGCCCAATTGCTCTCGGCTAAGTAACCTGATAGCAAAGTGATGGCCTGAACAATCTTCAATGATTTTGCTGCTTGCATGCAAGCATCAGTTCTCGATTCCAGTCAGGCATCTTATATAGGATGAAGCATGTTGGATTACTTGTTCTTTTCCCTCCAATGCAAGGATTCTTCCTAGACGATGTCCACACGTCCCACGGAAAAACCTTTGATTTCAGGCCAATTTGAGAAGGATTTGAGAGGAGAGAGATGCGAGATGGGCAGTTGTGCGCTTCTGTTCTTCATGCAAAGGGAGGAGTCCATTCTATAAAGAGTAGCATGCCGTCCGCAGGCTCTTCGCTAACACATGCCTTGCTCCATTAATTCAATGAAACTAGAACCAGGATGTTTCTTTAACCCACTTAAATTAGCTCTGGCCCTTGTATTGGTAAATTCATTCCACTGCCCTTCCTGAGCATACACTTCTGAAATCAGAGCATAAATACCTGGTTTCTGTGGTCCATGCTCAAGGAGCTCTTTGCTAATAGCAAGTGCCAGTTGTGTATTTCTATGCGTTCTGCAAGCAGAGATCAAAACACAAAATATAGTGGATTTATCCTTCAAGGTAGATAGCTTTATAAATTTGTATCCATCTTCCAGATGCCCAGCACGACCCAATAAATCAACCATGCAACCATAATGCTCTTCCTGTGGAAGAACTGAATATACTGAGGTCATGGAATTGAACATACGCCAACCATCCTTGACAAGACCAGCATGGCTGCAAGCAGTAAGCACAGTAGAGAATGTTAACTCATCAGGCTGAATGTTTTCTTCTTCCATTTGCTTAAACATTTCAAGCATATTAATATAGAATCCATGCATCGCATAAGCACTGATAATTGCATTCCAAGTATCCAAGTTTCTGTATTCCAAACTAAAGAACAAACCTACTGACAAATCCAGTCTTCCACATTTGGCATATGCACTTATCAATGAATTTGCAGTAATCTTATCTTTCTCTAACAGGGAACGGTAAACAAAACAATGGATTTGTTTTAGACCATTTAGATGGCCAAGCTCAGAGACAGCTTGAACAGCAGTTACAAGAGACATGGAATCAGGTTTCTCCCCATGTTTCTGCATCAAGTGAAATAATTGAACCACCTCATCTCCATGTCCATAGGGTAAGCAACCCTTCATCATGGCTGTCCATGAAACCAAGCTTTTCTGTTCCAGTAAATCAAATATAACCCTTGCTGCTGCAGGTTTTCCGCAAACTGAGTACATATAAAGAATATGATTTTCAACGTCACCATCCGAACAAAACCCATGCCTAATCCCAAATCCATGGATCCACCTCCCTCTCACTAAATCTCTTTGATCAGCAAAAGCAGCAAGCAGACTAAGAACAGTTGCAAAATCTGGAACAATACCTTCTGCCATCATGTAATTGAGTAAGGAGGTGGCCTCATTGGCCATGCCGTTATGTAGGTAACCGTACATCATTGCATTATAGGAGACTGCATCTTTAACAATCAGTTGATTAAAGAGATGTCTTGATATCGTGATTTTTTTGCATTTGGAGTACACCTTAACAAGAGCAGTCGCCAAAACAACATCCAGAGGTATATATCTTCTTATTAAGTAGGTATGAATACTAGCAGCATAGCCGAAATAGCATACCTCAACACAAGCAGAAATCACGTTTGCGAAGGTGACAGAATCTGGAGTTATTTTATGCTCATGCAGCATCACAGACAAATAGTGGATTGCATCAAAACTCTGTCCAGCTCTAGTAAGACCAGAAAGCATAGCATTCCATGAAGCTGCAGTTCCCTTTGAATTCTGTAAAGTAGCAACTGCTGATTGATAAGCTCCACATCGAGTATACAAGTTCACAATGCAGGTCTCTAGAATATAATCTGAGACAACAAGTGCTCTCCTTATGGAATAGCAATGGAGTGATTTGCCCTCTTTAAGTGCTCCCAAATTCCCAGCTATTTGCAGTAAGCTTATCATAGTCACACGGTTTACTTCCAAGTTGCCCTGCAGCATATCAATGGCAATATCAAATGCATTCCATGCAACTGAATCCACAATTTCTGAATAACCAGTGATCATCGAAGTGTAAGCAACAACGTCCTTGTCAATGATCTCTTTAAACACTCCCTGTGAATCGTCCATCCTATGAAGCTTGGAGTACAACACAATGAGGGAGGAACCGATGAATTTATCCCCAGACAGACCAAATTTAAGTGAATCCACATGCATTCCTTTACCCAAGTACAGATTCTCAAGCTCAGTGCAGCTTTTCAAAACAAAAGTAATAGTTTTCCCATCCAAACCAATCTGGTGTAATTTCAACCTTTTGTACAAGATAATAACTTCCTCTGGATAACCAGCTCTAAAATAATCAACCATGGTTGAATTCCACAGGGAAAGCTCATCATTTACAATTTTCTGGAAAACAAGTCTTGACTCAGACAGGGCCCCTAAATTAGCATAACAACTCACAATCTTAGAGCCAAGAATCACATCCCAGCACAATCCATGTGTGAAAACATGACAATGGATCTTCTTTAGAGACCTAATATCTGCACAGCCTTGGAACAATGGAGCAAACTTGTCAAAATTAAGTATCTTATTAGAGCATGAATTTGCATCGGCAGTGGATGCTGATAGTCTCCAACGCAGCTTCAGCACTGCAATTTTATCAAACTTTGAACTAGTGTTTCCAGCTAAATTCCCCTCAAAAGAATTGGTAGCATCATCATGGTTGTTGACGCAAGAAAAACAAAAATAGGTAACTAATTGACTCCGAATTCATAGACATACGATGACAGTTCAGTTAAATGA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0177900.1 | 2 | 27236635 | T | G |
| Osa02LNT0177900.1 | 2 | 27236650 | T | A |
| Osa02LNT0177900.1 | 2 | 27237994 | A | G |
| Osa02LNT0177900.1 | 2 | 27239466 | A | C |
| Osa02LNT0177900.1 | 2 | 27240990 | A | G |
| Osa02LNT0177900.1 | 2 | 27241118 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0177900.1 | osa-miR5537 | Translation | 5.0 | 14.286 | 1 | 22 |
| Osa02LNT0177900.1 | osa-miR812q | Translation | 5.0 | 17.65 | 1 | 24 |
| Osa02LNT0177900.1 | osa-miR6249a | Cleavage | 4.5 | 16.567 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR6249b | Cleavage | 4.5 | 16.567 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR395t | Cleavage | 4.5 | 11.567 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR172a | Cleavage | 4.0 | 13.982 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR172b | Cleavage | 5.0 | 13.982 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR172c | Cleavage | 5.0 | 13.982 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR172d-3p | Cleavage | 4.0 | 13.982 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR426 | Translation | 4.0 | 19.189 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR426 | Translation | 5.0 | 9.94 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR396e-3p | Cleavage | 5.0 | 16.22 | 1 | 24 |
| Osa02LNT0177900.1 | osa-miR535-5p | Translation | 4.5 | 9.992 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR815a | Cleavage | 5.0 | 14.407 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR815b | Cleavage | 5.0 | 14.407 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR815c | Cleavage | 5.0 | 14.407 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR817 | Cleavage | 5.0 | 20.302 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR1852 | Cleavage | 4.5 | 9.626 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR1852 | Cleavage | 5.0 | 15.642 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR2873a | Cleavage | 5.0 | 9.544 | 1 | 24 |
| Osa02LNT0177900.1 | osa-miR2928 | Cleavage | 4.0 | 14.789 | 1 | 20 |
| Osa02LNT0177900.1 | osa-miR2873b | Translation | 5.0 | 6.546 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR2873b | Cleavage | 5.0 | 8.94 | 1 | 21 |
| Osa02LNT0177900.1 | osa-miR5071 | Cleavage | 4.5 | 11.881 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0177900.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0177900.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0177900.1 | 2 | nan | Physiological trait | Germination/dormancy | RM263 | RM221 |
| Osa02LNT0177900.1 | 2 | qSB-2 | Resistance or Tolerance | Sheath blight resistance | G45 | RZ273 |
| Osa02LNT0177900.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0177900.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0177900.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0177900.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0177900.1 | 2 | T2-2tiller | Morphological trait | Culm/leaf | C424 | C747 |
| Osa02LNT0177900.1 | 2 | qSDW2 | Resistance or Tolerance | Cold tolerance | RM263 | RM6 |
| Osa02LNT0177900.1 | 2 | oa2.1 | Resistance or Tolerance | Drought tolerance | RM263 | R3393 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)