© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa02LNT0180800.1
GTTGGGCATTTTTTCTGGTCAAACACAAAAGGTACGTACACTTATTTCTTCCCGTACGTTACATTTCGAAGCCAGCTATGCATGGTTCGGTTCGTCGACTGTACCATACGTAGCATAAGTCCATAATTTGGTTTAGATTTGCTTTGCTCCGGATCCCACACTTCCAAAATGTAAACACGATCATACTCGCAAGAAACTTCATTTCTACAAAAACTGACACACACCGAAGACATGCTCTCTTTTGTATTACACCTTCACAAGAATACTAGACTGGTCGTGTTGATCTGACTGGCAAGGTCTTCCTGTGGATGCTCATGAACTTGGCAACAAATTCTTCCAGTTTCAACAGTGCACTTGCGCCAACGGGCAATCTCTTATCATAGTAGGCATGCCAATAATAAACCTCCCTCTTTATACTAGATTGGATTCCCTTCAGAAATAGCTCTGCAAGCTTCTGGAGTATTAGTTTAGGAGGTACAAATTCAACCAAGAGTTTCTGAAGCTTGCCTCTCACCAAAAATAACCTTTTAGGAGAAGGGTCATCCAATATTTCTGCAGCAATTTCCTGCAGAACATTCTCCCATCCTAATGGTATAGCTTGTCCATCAATGAAGGGGTAATTGTTGGCTTTGCATGCCTCCAAGGCCAATATTGCCTCCCTCATGTTTTGCCTAGATTGACTTGCGATGGTAGCAGCAAAACTTGAAGGAAGATCAAAACTTTCTTTCTTTGATATGTAAGTAAGAATATCCACAATCTCGCGTGTATTGGGTACACCAATGCAAATAAGCTTGCAACGGCTCTTCATTGAATCGAGAATATGGGACTCGTCCTGGCAAGTCATTAATATCTTGTGTGTGTCAGAGGATGAATCAATCATCCATTTTATCAAACGTTGATTACTCTCACTAACTTTGTCAACATCATAGAGAACAATTACTTTGAATTTCTTTCTCACAGATGGATCGGTGGTTTTCTTCTTATTTGTAATTTCATTTGCCAAATCCATCAAAACATATCCAGCATTCTTCGAATAATACCTCAAATTAAGCTCCATATGGTGATCACTAGATGACAAAGGGACAAGAACGGGCATAGATGTAGAACCCTGGCCACTGCAGCTCTTCAAGTAGTGAGAAACATTTAGAGAGGAGTCACCAAAGATCTCAGTAACTACGGCTCTGCACAATGAACTCTTTCCTGATCCTGGAGGTCCTTTGAAAATGATATGCGGGCAAAACTCAGTGGAGACCAACTGTTTAAGCTGTTCAATTTGCTCCCTGTGACAAGTAAATCCACCAAGAGTTCTTGGACGATATTTATCAGCCCAGAAAAGCCTAATATTTTCCACAACAAGAGCCTTCTGAATGAAACTCGATTCAGATTCGTCGGTTGTTTTGCTGTTCGGTGATTTTGGTTTTCGGCATGTCTTTCCAGTGACACATGGAAGCCAAGAATCATTTTGCGCCTTTTGCATGTTGGAGGTGAATTTCATGACTCCTCCAACTAATTTCCCAGTGAAATCACTGAACTTTCCACTGTCCCCACTATATCTGCCACTATTAAACTGGCTACTCAAAGTGGCGCCACTATTTATTTGAGTGTGCCGACTAGTACCATAGTTGGAATTCCTAATTGTTCGTGAAAGGCCTGTCTGGGCTGAAATAGATTTTGGTGTTTGGGCTAAATTATTGCTATTTGCTTCAGTACCATAATTCTCAGCACGGGCAGTTTCTGAGGTCAAGGACTTGTCATTGTTATGCTTTGTTGGTGTTCTCTGAATTGGAGCCCTACAGTCACGAGAGAAGATGTCACCTGTAGGTATGGACTCTGTACTCGTACATGCATACTCATTATATCTGGAATTAGGCCACTTGCCATTCGCAATCAACTCATTGATCTCTTGGGAACAATTTTCTGCATGTGAATCCTCTTTGATATTGTCAGCTGAATCCATTTCCCCCTGTTTGGAGATAAGATTAGTGCCAAGGAATGCAGGAGCTCTAGGAGGATGCTCCTTCTCATGAGGCCGTAGCTTTGGCGTGGAAATTGACCGGTTCTGGGAAAATTTTTCCTTGATAGATGACCGACTAAAGCTTTCCATTGAAGGCCGAAATCTGGGAGGTGTTCGGTTGCTCTTCTTGCGTAATTCATTCTTCCCACCACTGTGTGAAGAATTTTGGTGCACTTGTTCCGTGAACCTTGGAGGAGTACGGCTGATGGCAACACTGCATCATTCCAAGGGCTTTCGTGCCACTCAGTTTCTGTGTCCGAAGGTTCATAGCCACTCTTGTGCTTTGTGGAAGAATCATTACGAGAATGTCGATTGTGTCCTGAGCTTCTCTCTGCAGCTAACATTCTCAATCCCTCAAACAGTTAAATGCTTATGTGGCTTAGAAAACTATAATCTTGTAATATCAACAGAGCAAAGAACTATCTCTCGAACTTCAAAGCTTCTGTGGCTTTGCAAACTGCAATTTTGGAATATCAATAGAATAAAGTAAAAAAGAATATGCAATTTTCAAAAATTAATTAAGTAATAAAACAAATCAAGATTCATTATGATGTAACTTAAAAACTTAAATGAATATAATGCAACTAATACAAGGATTAAGTAATTCACTTCGATAATTTCACTTGGCAACAGAGCTTGTAAATTAACAAACAGAGAACGATTTAGATTGCTATATAAAAGGGAACTTTCTGAACATGCAAAATACAAAATGAGTTCATAACTTTATATGAACTTACGTTCACTTTATTCAGACTCACAGATCACAGTTAAATCAAAATGCAGTGTTGCACGGATTTCACTCTTCCTTCATTCCTACATGGCATTCTTCAGTATTACGTTACTGGATTGCTGTGGGTCAATTTGCTTATATGATCTTACAAATAGTGTTCTGGTGAAAATCTGGCTGGGAGAAAATGTATAAAGCAACAGATCAATGTGGTCTCAGTATGAACTAGCTGAAAACCCTAAACTTTGTATATTGAAGCAAAATACCTAACTAGCTAACTCCTATACAGGGGAACTACAGTTCCAGAGATGCATTACTAAACAAATCACACTCCATAAAATGAAAGTGGTAGGATTTGATCATTTGAAAATGGAATTTACCAAGTGTTTATAGGTTCTAATTAGATAACCGTAGAGTTTCCAACCCTGTATAGTACCCTAACTTAGTTCTAGAGATTTAAACCGCATAAGAAATAATGAATCTATAGAATCAATTTTCTGACTCAAAGTAGATAACCATCTAATTTCCAATCCTGGATTTGCGCTCTACCATGCTTCTACAGACTTAAACTGTAGAGAAAATAATGGATTTAGAATCAAATATCTGACTGAGTTTTGCCAATATCTCATTCTTAAGGTGTTGCAGTTTACAGGGTAAGGAAATGGGTGATGCAAATTTTGAATCAAATAAATAGACAGATCAAGGATGAATCAGGAAAAGTTATTACCTGAAAGAGCAGTATAGTGTTCTTCCAACATCCACAGTTGGAGGGCCAAAGGGAGGACAAAAGCAAGAACTATAAAGAGACAAATAAGAGGACAAAGACAAGAAACACATATTTCAATTTTATTTTTCTGTGTTGGCATTTTTGTCTTCTTCCTTCACTCCACCAAGGAGAGAAGAAACCAAAGAAGAAGAGAGGAACCATCCATTCTTCTCCACTCCCTAGGCTGCTCACTATAAAAATTGTCATCTATTCCAAGGAAGCTAAATATATCCCTAAAAGGAGGACATATGTAGAATAGAACCTGTAGCTGTATGATCTTGCATTTATGCCTTACGTATTGATCCTTCATCGACATTTTCTCATCCTGTCAATCTTACTGATGTCAATAAGCACAGTATGCAACATCTGCTAGATCTTCACAAACATCCACCATACATAACGTATTTTCTGAAGGAGTATGAATAAGTTCTGAGGTTCATTACTAAAAGACCATGTCATGCACATGATCAAATTTTGCCATATTATCAGCAGATTGTTGAGTCGATCTTGAAACTAGAATTTTGTCCACTGGTTAGTACTCCCTCCGTCCCACTCAATAAGGCACGCACGCATTTTAATATTTAACTATTTAAATATTTGACCAATAAATATTTTATTATAAATTAAATTTCATTTGATGAAAATAATATCATTGGATTGTGATTTAAATTTACTTTTATGTGATTATAATTTTGTTGCTACAAACATTGTAGTATATGAGAAATTTAAAGTCAAAGATTAGTTTTGAAGATTGTGTCAAGTTTGACCACGTCTTAATGAGTGGGGCAGAGGGAGTATGTCAGTTGCACTAAAGTCCTAACTGAATAAGCATATTGACCTTGGTGATTGCAAAAAGAGAAAAAAAAACAGCATGCGCTCTTGGAAGAGACATGTTCAGTATTCCAATTAGGCCATTAGCCTTCAATAATTAGTTGACCATTTATCAAATATTCATGCCTAGAGAATTTATTAAAGTAAGTTATCTAATGTCCATGAAGTTTAATTTTGTATTAGTTTTGATAGTTAGAGAAATCTACACAAAATCTTAGAGCCAAATAATTGGCAGGGAACAACCAAAAAAGATCATATTATTGAATGAGATTAATTGAACATACAAACTAAGACTTGATTGTCATTTTGCAATTCTTTCAAAATACCATTTAACAGAAGGGTATTGTTTATGGGCAAGATACAAGAATAATAACCTTAAGTCCCTAGCAAGTTGAGGTAGGCTAGAGATGAAAGGTAATATAACTAATAGAGGTAGGAATGGTACTAGTACAGGAAAAAACAAATATTTAATATTCTAAACCAATTTATCTAAATAACCATCCACTGTGGTATAATTTACATGAGGATACAATTGAGTTCCTTCCTTTCTCGAGTCAATTTCAAAATATGTTTGGTCACCCTTAATAAATGTTGAATATATAAATATCAAATCCATCTTCAAGGGCAATGGTGCATCTTCAATGTTTTTCAGGAGTTGTTCTTCTGTGATATATATCTTGTTCAGGAATTTATTTATTTTTTTCTCCCAGAGGTCAACCAATTTGTTCATTGAGTAGACATTTCCCGAGGGTCTCAGATACAGCGTATTGTTTAATGTCCTGGGATCATCTATGGTGCAGATCGTGAATTTAGCAACATCAGTCTCTTCAACAAAAACTCCTCTAGTGTTTCCATCACCAAATATCTTAACTTCATCTCTTGGAGGAGCATCGAGTCCTGGCTGAACAAGTGACGGAAGCAAATAACGCATCAAGAAGTTGCAGCAGATGTAGGTGTGAGGAATGCATTCGCTCTCTATTAAATGGCGTATTTCAATTTTCTTCTCATAGAAGCCATGGTCCATGCCACAAATTTGAACCTTTGTGGGATCAAGTCCATATTCCGCTGGAATAAATCTCCAGCATCCTTAATAGCCCGAATCAGAAGCTTCTGCTCGAGCGCTTGCTTCGTGGGCACGGCGCAGATGACGACATCCACCTGCCGCACCGCTTCCAGCAGGCTCGGGTAATCTTCGAGCGATCCCTTCACGACCGTGGCGCCGGCGAGCGACGTGAGTGGGGCGGAGTCGGGGACAGCGAGGTGGTGGGGGCGGACGAGCGCGAAGGTGGGGTGGCCGGCGGCGAGGCTGGCGCGCACGAGGCATCCCCCGAGCCGCCCGGTGGCGCCGACCACCAGCACCCTGCTCCGCGTCGCCTCCTCGCACATCGCCGCCGACGCCACTTGATAAGATCTAGAGCG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa02LNT0180800.1 | 2 | 29089497 | T | C |
| Osa02LNT0180800.1 | 2 | 29089568 | C | T |
| Osa02LNT0180800.1 | 2 | 29089738 | T | C |
| Osa02LNT0180800.1 | 2 | 29089925 | A | G |
| Osa02LNT0180800.1 | 2 | 29091540 | A | T |
| Osa02LNT0180800.1 | 2 | 29092075 | A | G |
| Osa02LNT0180800.1 | 2 | 29092738 | C | A |
| Osa02LNT0180800.1 | 2 | 29092782 | G | A |
| Osa02LNT0180800.1 | 2 | 29093847 | A | T |
| Osa02LNT0180800.1 | 2 | 29094026 | A | T |
| Osa02LNT0180800.1 | 2 | 29095254 | T | C |
| Osa02LNT0180800.1 | 2 | 29095470 | A | C |
| Osa02LNT0180800.1 | 2 | 29095785 | C | G |
| Osa02LNT0180800.1 | 2 | 29096375 | A | G |
| Osa02LNT0180800.1 | 2 | 29096824 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa02LNT0180800.1 | osa-miR5532 | Translation | 5.0 | 9.887 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR5808 | Translation | 5.0 | 12.676 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR5815 | Cleavage | 3.5 | 12.744 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR5822 | Cleavage | 5.0 | 15.53 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR2873c | Cleavage | 3.5 | 13.492 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR5079b | Cleavage | 4.5 | 15.934 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR171c-5p | Cleavage | 5.0 | 13.669 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171d-5p | Translation | 4.5 | 12.351 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171e-5p | Translation | 4.5 | 12.351 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171f-5p | Translation | 4.0 | 12.351 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171i-5p | Cleavage | 4.5 | 13.669 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171i-3p | Cleavage | 5.0 | 22.314 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR171i-3p | Translation | 5.0 | 13.547 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR1428a-5p | Cleavage | 4.5 | 15.298 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR810b.2 | Translation | 4.5 | 13.521 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR1863a | Translation | 4.5 | 11.572 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR1866-3p | Translation | 4.5 | 9.689 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR812g | Translation | 5.0 | 17.617 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR812h | Translation | 5.0 | 17.617 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR812i | Translation | 5.0 | 17.617 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR812j | Translation | 5.0 | 17.617 | 1 | 24 |
| Osa02LNT0180800.1 | osa-miR2055 | Cleavage | 4.0 | 16.017 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR2095-3p | Cleavage | 5.0 | 14.255 | 1 | 20 |
| Osa02LNT0180800.1 | osa-miR2122 | Translation | 4.0 | 12.726 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR2863a | Translation | 4.0 | 16.159 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR2871a-3p | Cleavage | 5.0 | 12.117 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR2871b | Cleavage | 5.0 | 12.117 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR2923 | Translation | 4.5 | 11.413 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR5073 | Cleavage | 4.5 | 12.466 | 1 | 23 |
| Osa02LNT0180800.1 | osa-miR5079a | Cleavage | 4.5 | 15.934 | 1 | 22 |
| Osa02LNT0180800.1 | osa-miR5338 | Translation | 4.0 | 15.808 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR5498 | Cleavage | 3.0 | 14.225 | 1 | 21 |
| Osa02LNT0180800.1 | osa-miR5509 | Cleavage | 4.5 | 18.318 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa02LNT0180800.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0180800.1 | 2 | nan | Physiological trait | Eating quality | nan | nan |
| Osa02LNT0180800.1 | 2 | qSDW2 | Resistance or Tolerance | Cold tolerance | RM263 | RM6 |
| Osa02LNT0180800.1 | 2 | nan | Physiological trait | Eating quality | RG139 | RZ58 |
| Osa02LNT0180800.1 | 2 | oa2.1 | Resistance or Tolerance | Drought tolerance | RM263 | R3393 |
| Osa02LNT0180800.1 | 2 | nan | Morphological trait | Panicle/flower | RG139 | CDO686 |
| Osa02LNT0180800.1 | 2 | nan | Morphological trait | Seed | C747 | C1445 |
| Osa02LNT0180800.1 | 2 | qGRH-2 | Resistance or Tolerance | Insect resistance | C621 | C601 |
| Osa02LNT0180800.1 | 2 | qGY-2b | Resistance or Tolerance | Drought tolerance | RM526 | RM525 |
| Osa02LNT0180800.1 | 2 | qPH-2 | Morphological trait | Dwarf | RG324 | RG83 |
| Osa02LNT0180800.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0180800.1 | 2 | qLTSPS2 | Physiological trait | Sterility | RM1385 | RM240 |
| Osa02LNT0180800.1 | 2 | qTGW-2a | Resistance or Tolerance | Drought tolerance | RM526 | RM525 |
| Osa02LNT0180800.1 | 2 | nan | Physiological trait | Eating quality | C621 | C370 |
| Osa02LNT0180800.1 | 2 | qCHR-2 | Others | Others | RM263 | RG520 |
| Osa02LNT0180800.1 | 2 | qSB-2 | Resistance or Tolerance | Sheath blight resistance | G45 | RZ273 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)