© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0193600.1
GTCCCAAACAAAATTAATTTGTCTTCCATTCACGAGTCAGCATTAATAACATATATGTTACACAACTTTGTAACCTGTTATGTTAATTAACAGCCCTTATTACAGTCTAACAGCCTTATTAATTCTACCTTGTTATACGGCCACAGTGTTACTATGAGCAAACGCATATTGCTCGTCTTATGCATCGTTTGTTTACAGCGACGACTCGTGATTACTCATGAGTAAACCATTTACAGGGTTGATTTGAACTAATTAATTAATAGTATTGACATGGCGACCCAAGATGATAACATTTGGAAGCTCCGTCTACTCTGTTCATCGGGAAGCTCCATGATCTGTTGTTGATCATCAGCAGGTCTTCCCTGTTGCACAGCGAGCCCAAAACGAGTCGATAATCCAATGTCAATTCTCTATCGCTCAACGTACTGTTCCAAGTACTCTCTAATCATCAGCCTTTCCTCCTTCGTAAGATCGGGATTTTGACCAGTCAAACGCTCCCTTAATTCTCTCTCTTCATCGCTGGTACCATCCCTGGAGACCTGGACGTAGTTATTCACATGGCCATCAGCATTTGCTTTGGTCTTCTTCTCATTGTCATTGCACACCCATTTGCCGTCCACTATATATTTGTATTCATACCTTCCTTCAGGCAACTCCCTCTCAAGATACCAAGCTCTTTTCTCCTTGTTGTATGTCAAAGGAATTATCTGTCCCCACCCGACATCAAGCCCAGAAATTTCAACAGAAGAACAACTATCACTTTCCCACTTCAAAGTGATGGAATTCTTTGATAAGCCTGTCAGAATGTCAGCAGTAGCCAATTTAATGGCTTCCAACTTTGGAAAGCAAGCTCGTTTACTCTGTAGTAGCTGATGCCCTTCATTAAGACTGTAGCCAAGAATCCAGAACATATACGCCAATGTCACAGCAGGAGCTCTCCCAAGTCCAGCGGTACAGTGTATATATGTTACCCCACCATTATGGTTGACAAGCTTGTGCAGTTTGCTAATCACAGCAGGAAGCCTCAATCGCAAATCAAAAGCATCAAAATCCCTAATTTCGGCACGACAGTGCTCTATATCTTTACATTGTAGACAATATTCTTGAATGGCACAGATGTCAACTCCAAAATATTCAAGGTCTGGATCTTGCTGCAGGCAGAATACTGTTTTTACACCAATGTCCCTAAGTTTATCAACATCAAGTGGGCTCTGTAAGCAGGAGCCCACGATCAAGTCTGGGCGTATGAAATTGTAGTTCATTCCAAGCTCATGTCTATACGTCAACACTGCTCCCATAGCTTGCGTCATGTTGGTGCTGTACGTATCGGATTTCTCCGTGCCCGCCTCCACTGCGCCACTCTCGGCGCTAGAAGTAGACGCCCCGGATGCGGTTTTGACAGTGTTTGATCGGCGACTCCCGCCACGAACCATCGTCAGATTGAGCGGCGAGGGCCGCCTCATGGACCTGGATCCCACGATTGGAGGCTCCTTGAGCAGGTTCTGGAGGCAGTTCATGGCTTCCCTCCCGTGCCCTGCCCGCGCGGGCGCGACGGCGAGCGAGGACGCCGAGGCCGAGGAGCCCAAAAATATCTCGCGTTGGCGTTGGCGTAGGCGAGTCGAGAAGGAAGGAAGGAGATACTAGATGGCTTTCGCAGTCGCCGCGAAGAGGAGAGAAGAAGGGGGCCGGGGGCGAGACGAGAGGAAGAGGATGTGAGGTGAGGTGGGTGGACCCGGTGTAGTGGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0193600.1 | 3 | 471633 | C | G |
| Osa03LNT0193600.1 | 3 | 472866 | T | A |
| Osa03LNT0193600.1 | 3 | 474774 | A | C |
| Osa03LNT0193600.1 | 3 | 474991 | T | C |
| Osa03LNT0193600.1 | 3 | 475329 | T | C |
| Osa03LNT0193600.1 | 3 | 475616 | C | G |
| Osa03LNT0193600.1 | 3 | 475638 | T | C |
| Osa03LNT0193600.1 | 3 | 475670 | A | G |
| Osa03LNT0193600.1 | 3 | 471546 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0193600.1 | osa-miR5794 | Cleavage | 3.5 | 19.527 | 1 | 21 |
| Osa03LNT0193600.1 | osa-miR164c | Translation | 5.0 | 19.045 | 1 | 21 |
| Osa03LNT0193600.1 | osa-miR172d-5p | Translation | 4.0 | 19.17 | 1 | 20 |
| Osa03LNT0193600.1 | osa-miR1425-3p | Translation | 3.5 | 16.543 | 1 | 21 |
| Osa03LNT0193600.1 | osa-miR1850.3 | Cleavage | 4.5 | 14.866 | 1 | 22 |
| Osa03LNT0193600.1 | osa-miR1320-5p | Cleavage | 5.0 | 21.663 | 1 | 21 |
| Osa03LNT0193600.1 | osa-miR2930 | Cleavage | 4.5 | 8.756 | 1 | 22 |
| Osa03LNT0193600.1 | osa-miR2930 | Translation | 5.0 | 20.154 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0193600.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0193600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193600.1 | 3 | QPh3a | Morphological trait | Dwarf | RG104 | C515 |
| Osa03LNT0193600.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0193600.1 | 3 | qRTV3-1 | Resistance or Tolerance | Drought tolerance | RG104 | RG348 |
| Osa03LNT0193600.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0193600.1 | 3 | nan | Morphological trait | Root | RG104 | RG348 |
| Osa03LNT0193600.1 | 3 | qRDW3-1 | Resistance or Tolerance | Drought tolerance | RG348 | RG104 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)