© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195400.2
AGTTTACCTTATGGAGATGGAGATCAGATCCAGAGGTGGGGGCTTGATGCTGTAAGATGAACAGCACACTGAAGCACAGCTTATTTAATTTGAAGGAGACATGCTTCTTCATGTTGGATCTTCTCCGGGACATGATCCTAACAGCATTCCTGCAGAGCAAACATGGCACCTTCCGTAGGGAGGTAAATCTTCTTTCTGCGGCTAAACTAAACTTAGTTGTGAGCTTATGAAATGGCGTGCATGCATGCATGCACAGCCATCATTCCTCACTACTAAAATAAACTTGCAAAGCAGAAGAAAAATCATATCTGCCCGATAAACAAGTTAAACTGTGACCCTCCTAGATGAACAGATCACATGGTGGGGCTCCCCATCGAATCAATACCATTCAGTTCCTCCACGCACTGCCTAAAGCAAAGAGAAAATAGGGTAATCGCTGGGCTGTCTGACTCACAAACATTTTCTCAAGAGTAGAACAGTGTGAAGTGTGAACATTTCAGACCAGGCACATTTGTATGCACAAGAACGGCCAACTATTTATGAGCTTCAATTGAGAATTATTATTATTCCCCTCAAATGACCACTCAGACCCATTGACGTAAATTTCCAAATGAAGAAACCTGTTACACTCGGCCCTGTGCCTCTCTGCTTCTTCCAGCTCAACATTATTACATTACACGTAGTGCACAGAATTTACAGATAAAATAGACCACCGTATCTCTTCAGAGATTGCCTTGCACTTTCTGCCTTCAAAAACATCGTCAACAAGTGTAAAGGAGCTTTCAATAGTTAAAACTCAAAAACTCTACTAAGATGGTCCTTCATTCACTTGCCATTTGCTAATTATAACCAAAACTCAGAGGGTTGGCATTTTATGGTGTCTTTCTGGAAGGGTTTTAAGGGGAACTAGGGCTCAGTGGGTTGTAAAGGGGTGTCATGATCAGTGCACTAAACTTTAATTATGTGCCCATCTCAATGAAAAGCTAGTGCATCTTTGGGTAAAAATTCCTGTGATCATTCATATCAAGTGCCCCCACAGGAACGTGTCATGTGAAGTTGCTGCTTGCTTGAAGGATAAGCCCTACTGAATTAGGTGGTGGCTTGGCAACAGTGGTCCAAAATGCTAGATGCATGGCAGAGAAGAGACCATCTTTGTCCATGAATTGTTTTTACATGGATCATAGTACGAGATTGAGAAGCCTAATCTATTTTTATACTCTCTCTTTTTTAATAGGTAACATCATTTGCATAGCTGCCGCTGATGGGATTTTGAGATATAAAACAAGTCTTCTATTCTCTTTTGAGTTTTGTAATGCATTGCCTGGGGTCTGCTTGTACTACACTTCAGGATCAGAGAAGATATATATGCATATAGAATCAGTTTTATTTTGTTAGTGAATTATAACCAGTGGCTTTTAAAATGGGGTTAATAATCTGCCAGCACAAAATCCAATTCATGCCGAAAAAGTGAGCATGCCTCGACCCATGAAACTATATGATGCATTTAGAACTGAACTATCCCACATGATTTATCACTCAATTCGTCATTACCATTTTAGTAGTCATATACTCTGGCCAAAAGAAACCAAAAGTTTTTTTTGGGGGGTAAGAATTTGCTTGAAGTCTCTATATCTAGTCATGTTTTGTGCATTTCTACAATTCAACATGAGCTCATCTAAGCTACCTGGTCATCGTTTAAAGAGAAAAAAAATATAAATATTAATAACCAATGCAGTGCACACCGGGGATGCATAACTAAACTAACAGCCATCATGGATACAAAATGTGCAGCAATAATGACCTAGTAGCAAATGAATTGTGTATAGTGTGTGATACTAGTGGCAAATGCACTGCATGCTAAAGGCATTATCACAATTTGGAAGCAAGGGCTGTCTTGAGGATACAAATTTAACTGAATGAATTTAAATACATGGTCGAAGAACTAACAAATGCTATATATTTAGATGTATCCAGTGAGTACAACAATATGACTGTCTGCTCACCTTTCCAAGGTCGGTGAACTTGAAAAAAATATTGAGGTACTACAATACTTTCTTATTTGACCAAACATTCTGTTACAAGGCTACAAGTTTATGGGGCAGTCACTAAAGGAGCACTCTTCTTTCGCATTAAGAAAAATGCAGTTTTATGCATTATAAAAAATACAAAAAGCAGCACACAGGGGGCAGCAAATCACCTTTTCTGCAACAGACTGCTCAAATGATTGTAGACACCTTCTCTCATGGCATCCCTATTACCAGTATTTAAGGTGTAAATAACTGCTCCAGGATGATTCCTCAACCTCGCAACTCCGGGAATGTCTCGGCCCAATCTTGGTACAGGAATTGTGGCTAGCACTGGAATGTTCGATTCAATAACTCTCATTACAGCAGGGAAGAATGCCGAACTAAACAGCTCCATTTTACCCACTTCATCAATAATGAAAAGATCAGTGTCGTCCTTGACCTGCAGCTCCGGCAATGCTAGAGACTCCAGAGAAGCTATATCTACTTTGTACCTCCCAACAGTAGGCCATCTAACAGACTCGCGGCTGGAAACCTTGGAGGAGGCGAGCGGCCCGGTTCGCCCATCGAGCGTGACGACCTCGAACCCGACCCTTTCCCCACTCTCCCTCACCTCGCGGGTGTAGAAGCCGCGAATGTTGAGATGCGGGTGGGATTCGCGGAGGGTTTCGAACACACGCGTAACCAGCGTCGTCTTCCCCACGCCCGGCGGGCCGGTGACGAGGAGGCACCTCGACGGCGCGGCGGCCATCTGGTCGGTCGTGGCAGCCGGCCGCGGCGAGGGGCGGGTCACCGGCGGCGGCCGCAGCGCCGGCGTCGGAGGCAGGACGGGAGGCTGGTGGCGCTGCTGCGTTGAGATTCGTGTCT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195400.2 | 3 | 1745322 | A | G |
| Osa03LNT0195400.2 | 3 | 1745095 | G | T |
| Osa03LNT0195400.2 | 3 | 1746638 | C | G |
| Osa03LNT0195400.2 | 3 | 1747179 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195400.2 | osa-miR398a | Cleavage | 3.5 | 17.227 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR398b | Cleavage | 4.0 | 17.227 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR171i-5p | Translation | 3.0 | 14.957 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR416 | Translation | 5.0 | 20.149 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR444a-3p.1 | Translation | 4.5 | 9.98 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR395o | Translation | 4.5 | 10.081 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR529b | Cleavage | 3.5 | 11.867 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR444d.1 | Translation | 4.5 | 9.98 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR2122 | Translation | 4.5 | 21.712 | 1 | 22 |
| Osa03LNT0195400.2 | osa-miR2863b | Cleavage | 5.0 | 17.236 | 1 | 21 |
| Osa03LNT0195400.2 | osa-miR5083 | Cleavage | 5.0 | 17.255 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195400.2 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195400.2 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0195400.2 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195400.2 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195400.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195400.2 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195400.2 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0195400.2 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195400.2 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195400.2 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)