© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0195700.2
CTCAAATCCAAAAAGACACCATACGTTACTGCCAATACACAATCCAACACCCCAACACCTGGGCTACATCTGCTGTTTTTGTCTACCTGAGAGAGAGTACCTTGAACAATATTGATCTATTCGAACAAGGGAATGTTCATATTTCCCTGGTTGCAAAAGAAATACAAGCTGCAACTTCAGATAATGATCACGTGTACCATATTGTTTTCGCCCCAAAAAACAACTATCGAGTCTATGACTACTGACCCCTGTATTACCCTTCTATAAAGAAATACATCAATTCTGATGAAAACTCATCGAGATTGTCAGCCTATGCATCCAAAAGACCAAAACTACGAGGCTAGTTCATCAGAATCTTTTCCCCATGATGAAAACTCACTGGGACAACGAAAGCTTTAGCTTCCATCAGTACACTCCAATCTTTCCCCCCAAAAAGAGTACATCTGAATCTCAGCACTGGAAATCACCTCGGATACTTCTGTAAGTAAAGATCATGTGGAGCATATCCTGCAGAGACAATCCTGCTGCCAAAACGCCGTCCATGTAGTGAATGAGCTGCAATGCATGCAGCCTCTTTGCGCAAGAACTCTACAAGTATACAGCCAGCTTCGAGCGCACTGGTGTTTGAAGCCAAAGCGTTGTCTCTAGCATCAACTGCAGGTGCCTTCTCTGTGTTGCTTTCACTCACACCAGCACCACCTTGTTGCTCGTTCTCCCTACCAGATTTGTCCGCTCCATCTCCAGGTGCTGTGGAACAAGAAGTTTCCAAGGACGCCGGATCTGCATCTGCATGCCCTCTCTCTATAGTTCCACGAGCATCATCTTGAGCATCCGTAGAATCTGTCTGATCAGCTTCCACTCCTTGATCAGTATTCTCGTCTCCTGCTGTAGGTGCATCACACTCGCCACGTGTGTCAAGATTTTTGTGGTCCCGACCCTTGGGAATAGAATCTGTGTCAAGCTCTACGGGATCCTGGACCTCACAAATAGAAGGATCAGGAACATCTGTACTCTGATTCAACACAGAACATTCCACTCCAGTCTCAGTGCAGCTGACATTGCCACCATATTCTTTGGGCTCAATCTTGGTGGATCCATCTTCACACTCGGTTATGGTATCCCCTGTAGTGTTGTCACTGCTAGCAGGGTACTTTACGACATTTATGGATTTCACAGCTCCAAACCTTGCACACTCCACACGTACATCTTCCAATATTTCCTCCAGCTCAGATTTTGAGAGTAGCAAATACTCTTCTTGGTCAAACACATTTTTTAGCTGCAGGACTTTTGTTGGTTCTTCAAGTAGTGATTTGGCACTGTCAGGAATTCCATAAAATGGGGAAGCTTCATTAAAAGCCTGCTCGGTAGAGTTAGGGAACACATTAACAGCAGTTAGGATGCCTCCACCAAGCTTCATCCCATTGAGGCCAGCACATGCCTTCGATGTAATGGAGTGATCAATGTACTCAAGAAATGCACATGCCCCACCAAGGTATTCATTAAAAAGAAAGCGGTAAGCAGCCAACGGACCAAATGAACTAACAATTTCCATGAGCATCTCAGATGAAATCACTCCAGAAATCCCAGCGATGAAAATCTTGTGTGGTGAATCTGCAACAACATCGGATATCAATTTAATCTCTTCAGAAGGCTTCTTAGGAGCAACATGCTGCATGGAACAGAAAAATATAACACAACATTAGGAAGAAAGATTTTACAAACTATAATCTGTTCCAAAGTTGCAAAATCATGCTATAGAAAAAAAATGCAGCAAAAAAGTATGTATGTAGAGGACATCAGAGTAATGATCTGAGTGCAAACTATGTTGATAGCAAATATAATCAATTAACCATTCATCGCTAGTTAGACTTGGCTCTTAGCCCTCTGTTCTACTGAATGTAACACTACAGAAGGCATTATCACAATCTTAAACTCAGGGGTAGTGAGTTCTGTATTGGTGTCATTTGTTGATGCTACACGGTATTATAGACTTATACTGCCATAGCAAAATATTCTTGGTTACATCAAATAACGACCACCAAACAGCGTGCATTCTTGATTTTGTAGGCAGTTTTGTAAGTAGCAAATCAAATTGAGAGCAGAAAAAATACTTAAAAATCAAACATATAAATTGAGTAAGCAGTCTGAAAATTCACACAAAAATGGCATGTCACCGTATACAGCTGATTGAGAAAGATGGTTGAATAAAAAAGATGGATCATGCGATACTTTGTCAGTTTACAGAATGAAACTACAGACAGGATCTCTTCTGTGAAAGTGCTCTTTTTCTGTTAGTAATATAGTTAAAATGTCCAGTAAAATGAGCTATGCCTTTGTGGCTCAAGATAGCATATGATTTTTTCAACAAGACCAAATTAAGCTGAACTTATTATCTTTAACACAGAATTGTTGAAAATGTATGAAAACTATAGCTTTAAGAAAAGGGTACTGAAATCTCACTATAACACAATAGTTAATTAAACAAGTTTGGTCCCTTCTATTGTCATTAGCATTAGCATTAGCATTTAGTAAATATCAATGCACCTTAGTGCTACAGACAGTAAAGGGTGATTAAGGTGCTTTATGGTAGTAAGAAATCCAAACCACTTAAGTCGCAGAATGACATGCACTAAAAAAAAAAGCTTCAGAATGCGAATGTGCTTCAAGCAATATACTCATTACAATACTGAACATCAGAAGCAGACTAAGTGCATGTGCATTTTGAGTAATAAGAATTGAGAACAAGCCATCTAAAAACAAGAGGAGAGACAATAAATCATTTGTGATTCCTGAAACCACTTATATACGTGTCACACAAATCAAGCATATTGACACAAACCACACTAGATGTCATGTTAACTTACATCAAACAATGTTTGGCATCTTTAGTGGGTTCCAAAAAGGGTGGAGAAACAAGCAAAGGAAACCAATGTAAGGGTGAATGGTTGGCTTCTAAAATGACCGAATGGTTCCTATACTAATAAAATTGTGTGATCATAATTCTAGTAGAAAGATTTTTCGTTCCACATTCACATTGGTCTATTGTCCACTCATATTAGAATGGGAATATGGCTAACTTGACAGTTATCAACTATCACATTGTGCTTGTTGCCATGAAACAAGATTTATGGATATTCCGAACCAAGACAGGAAGGTTATCTTAGCAATCAGCATGCTCAAATCTTTACTAATAATACATTTACTTGAACCATGTTGTGCAAGCTGTCTTCCTAATTTTTCCATGAACTGAGCACCATAAGGACTCTGCCAGCAGTGTAATCAGCAACCAATAATTCTGGAAGAAGCAGCAGTCACATAATATTGACATTACACCTTGAATCCTGCTTAAAAAATCCTTTGCTTCACCATCCTGAACGTGAATTATGACATACCCAATTAAAATACCTGCCATTTCAACATATTCTTTGGGGCGTCTAATTTTCAAAGAAGATCCACCAAAAGACCGTCCGTCAAAAGAAAGAGCTGCTGTAGCATCCTCTGGTGTAAGAAATTCAACAAAGGCCTGACGTTTGTCCTTGTTTATCACACAACTGAGGCATGGTTGTTTGGACCTCTGGATATGGCTCGCACTAGATGACAGCAAGAACTCATTCAAGCAGCCAATCAGCATGTCTTCTGTGGCTAAACTTGGTAGATTTTCAATGTGCAATCTCCTGAGTGGTCGGGTTGCTTGTGTCAGCTGGACAGAATCAACAGCCAAATTACTCCCTGTCAATATAGTTCCAATTGTAGTGTTTGGGTCCTGCTTCGATGTGGTAAAATTGACTGGAACAGTGGAATCCTTTAGACCAACCGTTGACTGCAAAGTGGTAACAAAATTAGATAGATCTGTTGCCACAGGAAGCTGATCCCATGTGGCTGATTTCTTTTCTGGAGACCGAATAACCAGAGAAGCAGTCTTGATAGTTGTCTGTTCATCTTTTGGTGCTGTTTTCCTTTTCCTTGGTGAATATCCACCAAGCCGACTTTCATATCTCCGGTAAGATCCACTACTGTATCCATCATTCCAAGATGTTCTATGTCTGTCAGTTTCAAAATGCTTCCTTCTTGATTTGTCCATGGAGTGATATGGAGGATAATAATCATGGCCATGTCCACGATAGCTATGCCTTTGTTCTCTTGAGGATGGTGAGACAGACCTGTCATGTCTTTCTTGATAATGATCCCTGCTTGTCGACCTTCTCCTTTTTGACCTGGGCTCTTCATGGTGCAGTTTTGCATTCTCTTTCCTCCCGTCTTTTCTATCAAAATGTCTGGGATCTTGTAATCGCACAGCATCTTGTTTCTTCAGTGTGGGTCGATCAACCTGAGAACTCTTCTCATCATCAAAGCCACGGCTATTTCTCTTTCCATCAGTTCGCCTCTCACTCCTCTCCTTGATTCTATCATTACCAACTGGTTCATCAATCCATCTTTTCCCAGGTCTTTTTTGGGATTCCTGTATTGTTGCATCACCGTCTCTTGCTGTAATCTCACCATGGTTTCCACCTCTGCTTTTGCCAACTCGACCACTCGTGTATGTGCTAAGCTTATGAGAATTATGATTGCCTTTGTCTTTGTCAACTAAATGACTATCATCTCTTGTGGAGGACCGCTCTTTCTTGGAGCTCTTCTTTGGTGCATCTCTTTGATCATCTTTCGATGGGACCTTCACTTTAACTTTCAAGTTATCTATCTTGGAGATGTCTTTTGGCCTATCTTTCAGGTTGTCTTTCTTGGAGACCTCTCTTTGCATATCTCTCATGTTGTCCTTTCTACGCTCTTCCCTTGGCGTATGTCTCATTTCATCCTTCTTGGAACCCTCCCCTGGTTTATCACTATTATCCTTTTTGGAGCCCTCCAAGGGCATTTCTCTGACATCCTTTCTGCTTTTGGACCCTCTTCCTGATTCCAGATGATTGGATTTACCATTACTGTTCTCTTCGAGCCCTTCCTTGGTTTTCTTAGCTTCTGAAGCGGTTTTCTTTTCACGACGCGACATGATATCCTGAATGCTCAAAGGCCTTGTGCGAGCAGCCGTCCCATCACTAGTGATTCTCCTAGAATCCTTTTCGTTCTGTACTCTTCTACTCATCTTGCCCCGAAACCAGGAATTTGGACAAGATAATGAGGTCCTAAATTATTTGAGTTAGCATAACCAGAGGATCATGACAAGAGCAGTGCCTCTTCTTCCTGGGGAGAGCGGAGGCGGAAGCGGGTGGCAGCAGGACGCTGAAATCCCGGCGCGGTGGCGGCGGCGCGGGTGGTGGCCGCGGGGGATTGGCTCCGCCGCGCGATCCCTTCTCCTCTCTCCGCTCCGGGCTCCTCCGCCTCGTGGTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0195700.2 | 3 | 2104003 | A | G |
| Osa03LNT0195700.2 | 3 | 2104525 | G | A |
| Osa03LNT0195700.2 | 3 | 2106054 | T | C |
| Osa03LNT0195700.2 | 3 | 2106071 | C | G |
| Osa03LNT0195700.2 | 3 | 2106886 | T | A |
| Osa03LNT0195700.2 | 3 | 2107043 | T | A |
| Osa03LNT0195700.2 | 3 | 2107281 | A | G |
| Osa03LNT0195700.2 | 3 | 2107616 | C | A |
| Osa03LNT0195700.2 | 3 | 2108655 | G | A |
| Osa03LNT0195700.2 | 3 | 2109935 | C | T |
| Osa03LNT0195700.2 | 3 | 2110269 | T | C |
| Osa03LNT0195700.2 | 3 | 2111420 | T | C |
| Osa03LNT0195700.2 | 3 | 2111733 | T | C |
| Osa03LNT0195700.2 | 3 | 2112124 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0195700.2 | osa-miR5543 | Translation | 4.0 | 12.973 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR5794 | Translation | 4.0 | 17.559 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR5802 | Translation | 4.0 | 16.76 | 1 | 24 |
| Osa03LNT0195700.2 | osa-miR5835 | Translation | 5.0 | 11.006 | 1 | 24 |
| Osa03LNT0195700.2 | osa-miR167a-5p | Translation | 4.5 | 17.48 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR167b | Translation | 4.5 | 17.48 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR167c-5p | Translation | 4.5 | 17.48 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR399d | Cleavage | 5.0 | 23.637 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR399i | Cleavage | 4.5 | 23.637 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR399j | Cleavage | 5.0 | 23.637 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR167e-3p | Cleavage | 5.0 | 13.818 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR167h-3p | Cleavage | 4.0 | 16.005 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR167i-3p | Cleavage | 5.0 | 13.818 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169d | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169e | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169e | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169f.1 | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169f.1 | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169g | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169g | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169h | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169h | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169i-5p.1 | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169i-5p.1 | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169j | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169j | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169k | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169k | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169l | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169l | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169m | Cleavage | 4.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169m | Translation | 5.0 | 18.788 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169n | Cleavage | 4.0 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169o | Cleavage | 4.0 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169p | Cleavage | 5.0 | 14.479 | 1 | 22 |
| Osa03LNT0195700.2 | osa-miR393b-3p | Translation | 4.5 | 15.683 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR810a | Translation | 4.0 | 16.762 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR169r-5p | Cleavage | 3.5 | 12.969 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR1320-5p | Cleavage | 4.0 | 15.051 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR2100-5p | Translation | 5.0 | 21.62 | 1 | 22 |
| Osa03LNT0195700.2 | osa-miR2100-5p | Translation | 4.5 | 15.578 | 1 | 22 |
| Osa03LNT0195700.2 | osa-miR1862f | Cleavage | 4.5 | 13.278 | 1 | 20 |
| Osa03LNT0195700.2 | osa-miR1862g | Cleavage | 4.5 | 13.278 | 1 | 20 |
| Osa03LNT0195700.2 | osa-miR5484 | Translation | 4.0 | 17.492 | 1 | 21 |
| Osa03LNT0195700.2 | osa-miR5515 | Translation | 4.0 | 14.592 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0195700.2 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0195700.2 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0195700.2 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Osa03LNT0195700.2 | 3 | nan | Morphological trait | Root | CDO20 | RG409 |
| Osa03LNT0195700.2 | 3 | qHDD3-2 | Physiological trait | Flowering | RG348 | RM231 |
| Osa03LNT0195700.2 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0195700.2 | 3 | qST3-2 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0195700.2 | 3 | QSbr3a | Resistance or Tolerance | Sheath blight resistance | RG348 | RG944 |
| Osa03LNT0195700.2 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0195700.2 | 3 | QSs3 | Physiological trait | Sterility | RG348 | RG944 |
| Osa03LNT0195700.2 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)