© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0197600.1
CTCTCTGTCTCCCTCTCATTCATTCATTTTTATGGCAGTTGAGGGGAATGTTGTCTGGTCCGAGACCTAACACCGGGCGGAATGGCGGATTCAGCTGCAGCTAAGCAAGCTAGGTGGGGGGTTTCGGACCAGGCTTCATTCCCCCCAACTCAACTGTTTAGTTCTTCGGCTTCGGCACAAATCGGCGGGCGACACTGCCAGCGTGAAGCTTCTGCAGGTAGGACGATGTTTGGCCGTGCAGCCAGCCGTCCGTGCTCCATCCACCATCACCATGCATCGATATATATCTTCCATCTCGCTCACTGAGGTCTGGTAACTAAGCAAAGCACACATGTTACTCACTTGAGGGAAGCCCCGACACCCAACCATAAATTCGCCAGTCTGAGGAAAGAAAAGCAAAGCTCAAGCATGGACATAGTGCGACACTTCCAATATGCCTAAGCTTCAGAACCATTTCAAGAAAGAAAAGATGTATGGGAAGATAATTTTACCGGCCTTTGCTTCAGAAACATTTCAGATTCATTGCATGCAGCACATGGTCTCACAGTTTCTATGGAGTTCTGTGTCTCATTGACCGGTCTACTTGACCTAGATCAAAAGTCAAAGTGAAGCTAGAAATTTGTAGCAATGAAAGAAGAAAGCCAAATGGATCCAATCAAACCTTGCAAAGAATGTTCCCATTGCATCAAAGAGTTTCACCTTGTTTGCCCTTGCATCAAGAAAACAAGCCTTCATTTGCTGCAAACAATTCTCAAGTACTTCTGATTTACTCTTTGTACCAATGCTAACTGATTTCATATCAGCTTCCATCATTGATCTTAAATAAGGTTTCCAAAGCTCATACCTAAAATGACTTAAATTATTTCAAGAAACCAAACATATTACATGGGTTCAGTAAGTGAGGTTTAAGAATCAACTTACCCCATTTCATCGTAACCCATCACCAATGCCTCGCCCTGCATTTAGAGAAAAAAGAAACAAAAGACACGTGTGAAATTAGCAGATGAGCTTCATTTTCAGTACAATGGAGAAAAAGTATCTCATGGACAAGTACTATCTGCACTGGAGAAAAAATATATTACAGAGAACAGTATTTCCTGTGAACCAGATAAATATATTTTACAACCCACTAAACTTTTAGCGCATTTGACACTTTGGTGCTGCTGGTCTGTTGGATGATTTGGAAGGAGAGAAACACGCGAGTATTCCAGAATCAGAGCCGAACAGCGGGGTTCCTTTTTGGCGCAATTAAAGACGAAGCAGCGATCTGGAAAGAAGCTGGGGTTTTCAATGTTTTAGGAGAGTAACAACCTTCTGTAACTTGTATTTTTTCTTTTTAGGAAGTTGCCGCTGTGGCAACATCCTTTCACTTCGACAGCTTCTTGTCGAAGTCTGAAACTTGTATGTGTGTAAATACTCCTTTTCTTAAGTAAATTTGGTCAGCCTATCTTAGGCCGGCCTGGCTAAAAAACCCACTAAACTTTTGCCGGGTCAGCACAAACCCCTAAACTGTCTTATCAGGACTAGTCCAATAGAAATCACAGAAGGTATATGTAACGGAAATAAATAGAATATGTCATTAGAAGTAATACTTTCAGCTATTTTGTCCAAAAGTGTGGATGCATTACGTATGACTATAAGCATGAAAAATGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0197600.1 | 3 | 3489236 | A | G |
| Osa03LNT0197600.1 | 3 | 3491074 | A | G |
| Osa03LNT0197600.1 | 3 | 3493129 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0197600.1 | osa-miR5540 | Cleavage | 5.0 | 11.651 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR166a-5p | Translation | 5.0 | 14.826 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR166e-5p | Translation | 5.0 | 14.826 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR166g-5p | Cleavage | 5.0 | 9.908 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR529b | Cleavage | 5.0 | 16.889 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR2090 | Cleavage | 5.0 | 20.322 | 1 | 22 |
| Osa03LNT0197600.1 | osa-miR5160 | Translation | 4.0 | 10.796 | 1 | 22 |
| Osa03LNT0197600.1 | osa-miR5161 | Translation | 4.0 | 11.798 | 1 | 20 |
| Osa03LNT0197600.1 | osa-miR5338 | Translation | 4.5 | 9.38 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR5338 | Translation | 5.0 | 23.038 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR5491 | Cleavage | 5.0 | 14.323 | 1 | 21 |
| Osa03LNT0197600.1 | osa-miR5491 | Translation | 5.0 | 19.989 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0197600.1 | 3 | qHEJ-3 | Morphological trait | Shoot/Seedling | RM175 | RM22 |
| Osa03LNT0197600.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0197600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0197600.1 | 3 | rn3 | Resistance or Tolerance | Drought tolerance | RM231 | RM175 |
| Osa03LNT0197600.1 | 3 | dth3.1 | Resistance or Tolerance | Drought tolerance | RG104 | RZ329 |
| Osa03LNT0197600.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0197600.1 | 3 | qDEF-3 | Physiological trait | Flowering | R518 | C721 |
| Osa03LNT0197600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RG348 | RZ329 |
| Osa03LNT0197600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197600.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | RM231 | RZ329 |
| Osa03LNT0197600.1 | 3 | qFDN-3 | Physiological trait | Flowering | RZ329 | RG348 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa03LNT0197600.1 | osa-MIR166c | 100.0 | 125 | 1 | 125 | 1.86e-61 | 231 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)