© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0198600.1
GTCCGTGAGCATCACATTTTTTTATTGGGAGATTTCATATTTGACAATTAATCAATAGTTCACGGTATATATTTTTTACATCCCAAATAGGGTCATTACACTATCGGCATCTGAGGATAGAGGGCAAATCCGGGTTACAGTTGGATTGGTTTGGGCCTTTCCGAGAGCTCCTGCTTCTAGTACTTCTTAGCAGGGCTCTAGTACTGGGCCACTCCCAACTTCCGGCCCATTTCACGAGTCCAGGAGGAAAGACTTGATGAAGCGGTTCACTTGGTCGGCTCCCTCCAACTGCAACGCGTGCCCTGCGTCCTTGATGATCTCTAGCCGTGACACGTCTCCCAGATGCCTTTGCAGTCTGTGGCCGAGATCCAACGGGAACACCTGGTCCTTGTCACCCCACAGAATCAACGTTTTCTGAGTGAGAACGGGGAGGGGATCGATGCCAGCTCCGTTCTTGAGAAGCTCGTGTAGCAGCTCGGCCCTCTCCTTCCTCTGAACCACGCACATCAACCGATTTTCACAGAGGCGGAGGTGGTTTGGGCGGTGAGGTCACGGGCGGCTGGAGGCGCATCCTTGCAGGCGGTGCGTGGCGGCGTGGTACTCGGCGGCGTCCGTCGGAGCTCGAGCAGGAGCTTGCGGCGGCGGCTGCAGCGGTTCTCGGCGAGGAACCGGTGCAGGTCTTCAGCGGCGGCGCTCCAAGGCGGTGCGGCAGCCTCTTGCGGGGCCAGCGGCTCCCCAAGGTCCGGCGGCGCGACGGCTCCTCGCAGGTCGGCGCAGGCACTGGACGGCGGCGGGAGGCGGTGGTGGTGTGCGGCGGCGCAAGGCAGCGGTGTGCGGCGGCTTTGGCAACGAGGCGGCGGCGCATCGGATAGGGCGGCAGCACGTGCGGTTTCTGGGAGGAGCGAGAAAGGCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0198600.1 | 3 | 4137658 | A | G |
| Osa03LNT0198600.1 | 3 | 4137659 | T | C |
| Osa03LNT0198600.1 | 3 | 4137849 | C | A |
| Osa03LNT0198600.1 | 3 | 4138701 | A | G |
| Osa03LNT0198600.1 | 3 | 4138743 | T | C |
| Osa03LNT0198600.1 | 3 | 4138845 | G | A |
| Osa03LNT0198600.1 | 3 | 4139559 | C | G |
| Osa03LNT0198600.1 | 3 | 4140748 | A | C |
| Osa03LNT0198600.1 | 3 | 4141082 | G | A |
| Osa03LNT0198600.1 | 3 | 4141814 | C | T |
| Osa03LNT0198600.1 | 3 | 4143672 | A | T |
| Osa03LNT0198600.1 | 3 | 4145052 | G | T |
| Osa03LNT0198600.1 | 3 | 4145781 | G | C |
| Osa03LNT0198600.1 | 3 | 4145900 | A | G |
| Osa03LNT0198600.1 | 3 | 4146125 | A | G |
| Osa03LNT0198600.1 | 3 | 4146618 | T | G |
| Osa03LNT0198600.1 | 3 | 4145518 | A | G |
| Osa03LNT0198600.1 | 3 | 4145494 | G | A |
| Osa03LNT0198600.1 | 3 | 4139139 | T | A |
| Osa03LNT0198600.1 | 3 | 4139445 | A | T |
| Osa03LNT0198600.1 | 3 | 4145840 | A | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa03LNT0198600.1 | DTM_#DNAt_MULE_japo_Os0218 | Chr3 | - | 4139672 | 4140086 | 414 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0198600.1 | osa-miR164a | Cleavage | 5.0 | 16.015 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR164b | Cleavage | 5.0 | 16.015 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR164d | Cleavage | 5.0 | 16.015 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR164e | Cleavage | 5.0 | 16.015 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR164f | Cleavage | 5.0 | 16.015 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR1846c-3p | Translation | 5.0 | 16.649 | 1 | 21 |
| Osa03LNT0198600.1 | osa-miR2867-3p | Cleavage | 5.0 | 22.451 | 1 | 20 |
| Osa03LNT0198600.1 | osa-miR5489 | Cleavage | 3.0 | 22.533 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0198600.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0198600.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0198600.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0198600.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0198600.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)