© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0198900.1
CTCCGTCCCACACTCCGTCCCACAATATAAGGGATTTTGAGTTTTTGCTTGCAACGTTTGATCACTCGTCTTATTCAATTTTTTTTTTGTAAATATAAAAAACGAAAAGTTATGCTTGAAGTAATGTAGATAATAAAGTAAGTCACTAATAAAATAAATAATAATTTTAAATTTTTTTAATAAGACGAGCGGTCAAACGTTGCAATCAAAAATTCAAAATACTTTATATTATAGGACGGAGGGAGTATTTATTTAGCTGCAGGTCTCCCTGCACTCATTCATCGTGCTAATCCAATCAAACCTTGTACCGGGCAAACACTGATGCAACAGCCCGTGAATTCTTTACGACCCAAACTGAGTATGCTCAAGTTTTCCAGATTAAGGTTGCTGCACATCTTCCGTTAACACATCGCAGATTAACGGCGTTTTGCTTTATTTCTCGTCTTCTGGATGGCGAAGCCTTATGAGTTCAGTCCATCAGTCGCGATACTGTGACATGAACTCCTCATGGAATTCCCTGAAGCGGGAGATCATCGAAGGTATCTTCTCCTCCTGCGGCAGGATCGTGCATCTCACGTGCCATGTCCCTGCAACTTGTCCAAAACCAGATCCAGGAGTCACAACGATGCCGGTGGTATCAAGAAGACGTAGAGCGTAGAATACATCAGGTGCTTTGTTGACAGCCCTGGCAGCCTCAATTGCCTTCTGTGGTAGATAAATCCGTGGGAACAGATACATCGCCCCTTCCGTCTTGTTGCATGTAATTCCATCAATACTGTTAAATGCAGACTCCATTGCCTTTGCACGACGAGATAAAGATTTTAGGATGTTGTCTTTCTCTTCCTCGTAGAGGTCATAAGATGCGTCCCCAGCCTTTGGTGGATCCATTATGAGGCTCGCAAGGATCTGGCCGGTGATATTTGAACACAAGTTAACAGATGCAATTTTGTAGAGTTGTTCTCTAACTGGAGTGCTGAAGCCAGTGACCTCCATGTAACCGCCTCTCTTGCCACACTCTCCGTAATATCCTTTAGAAACAGAATGCAATGATACTAATTGTAAATCGTCTCCATTGTATCCCATGGATCTTGCTATCTTCTTGAAAGAGTTGATCTTCTTGTTGGTAACATAAATGTTCTCTTGGTATACCTCATCCGCCAGAAGAACAAGTTCCTCGTCCTTGCAGAACTTTACTAGCTCATATTGCTGTTGCTCATCAAGAATCTGTCCAGTAGGATTTCCAGGATTGATCACCACCAACGCCCTAACAGTTATGCCTTTTGACCTGGCATCTTCAAGTTGATTCTTAAGCTTAGAAACCTCCAAACCCCATCCTGAGGATTCATCAAGATAATATGGCACAAGAGCTCCGCCATGAAGTGCTAGGGATGCTGAGTACAATGAGTATTGAGGAATTGGACACATAATGCCATCTCTGTTGTTCCTTATCAGCAACTGCATCATCATGTGTACACCAGGACTTGCTCCATTAGTTAGGAATATATCATCTGCATTTGCAGGGAAACCATCACGGGAGGCAATCCCAGCAGCAATCTCATCACGCAGTCCCTTGATACCCTGGCTATGACTATATGCCCCGGTGGCTCTTCCAGGAATCATGGAAAGAATTTTCTTTGCCCGAGCAATAGCATCAGTGCTGAACAATGATTTAATTTCCTCTCTCTCCAGCAGATTTGGATGATTGCAAAGTGCAAGAACCTCCCTGAAGAATGTGATTGGTTTTTGACCCAAGGACTGAGGGTTCCCGATGTTGCAATACACGATCTCATCAAATGGAAGAGAACCAGGTTGTGTCTGTAGCTGCTGTTGTAGGTGCTGAGCATGGATGGCAACCTCTCCACGAACTGCATATTCACATCGTAAAACCTCAATCTACCATTCTACCTTTGCTATGGAGATGCTGGATCTAGTTAGCATTCCGCCGTGAAACACCAATCTGCCGCCATGGCTCGAGTCGAGTTCTCGTCTCCCAAATGCAGCAGCAGCAGCAGCCTCCCTTCTCTTCGGCTTCCCTCCATCTCCGTAGCCTCTCCCCTTCGGCCTCGAGGACCACCTCCTTCCGCAGCTGGAGGATCCTTCACCCGTCGTCCCACTGCGGCCTCCCCGCCGCCGCCGGCCGGCCGCGCTAGCCGGTTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0198900.1 | 3 | 4384306 | A | G |
| Osa03LNT0198900.1 | 3 | 4384320 | C | T |
| Osa03LNT0198900.1 | 3 | 4385389 | C | T |
| Osa03LNT0198900.1 | 3 | 4386027 | T | C |
| Osa03LNT0198900.1 | 3 | 4386708 | T | C |
| Osa03LNT0198900.1 | 3 | 4386952 | T | C |
| Osa03LNT0198900.1 | 3 | 4387293 | T | C |
| Osa03LNT0198900.1 | 3 | 4387331 | A | G |
| Osa03LNT0198900.1 | 3 | 4387814 | A | G |
| Osa03LNT0198900.1 | 3 | 4388361 | G | C |
| Osa03LNT0198900.1 | 3 | 4390073 | C | A |
| Osa03LNT0198900.1 | 3 | 4390105 | G | A |
| Osa03LNT0198900.1 | 3 | 4384344 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0198900.1 | osa-miR5793 | Cleavage | 5.0 | 14.339 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR812s | Translation | 3.5 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR5799 | Translation | 2.0 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR5805 | Cleavage | 4.5 | 18.803 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR5822 | Translation | 5.0 | 13.731 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR5832 | Translation | 5.0 | 21.356 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR5837.1 | Translation | 4.0 | 14.802 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR166d-5p | Translation | 4.5 | 17.628 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR166h-5p | Cleavage | 4.0 | 17.628 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR390-3p | Translation | 5.0 | 20.521 | 1 | 20 |
| Osa03LNT0198900.1 | osa-miR812a | Cleavage | 4.5 | 13.621 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR812b | Cleavage | 4.5 | 13.621 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR812c | Cleavage | 4.5 | 13.621 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR812d | Cleavage | 4.5 | 13.621 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR812e | Cleavage | 4.5 | 13.621 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR818a | Cleavage | 1.0 | 10.726 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR818b | Cleavage | 1.0 | 10.726 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR818c | Cleavage | 1.0 | 10.726 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR818d | Cleavage | 1.0 | 10.726 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR818e | Cleavage | 1.0 | 10.726 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR529b | Cleavage | 4.5 | 18.514 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR1857-5p | Cleavage | 4.5 | 17.546 | 1 | 21 |
| Osa03LNT0198900.1 | osa-miR1875 | Translation | 5.0 | 14.032 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR812g | Cleavage | 4.0 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR812h | Cleavage | 4.0 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR812i | Cleavage | 4.0 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR812j | Cleavage | 4.0 | 12.772 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR2122 | Cleavage | 4.5 | 8.346 | 1 | 22 |
| Osa03LNT0198900.1 | osa-miR1863b | Translation | 5.0 | 16.57 | 1 | 24 |
| Osa03LNT0198900.1 | osa-miR3982-5p | Translation | 4.0 | 21.081 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0198900.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0198900.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0198900.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0198900.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0198900.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)