© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0199100.1
GAGGGCCTTAAAGTAAGAATACAGAACACATAAACGAAGACAAGGGACTTATCACAGATTATCAATAATAGCAAGGGCTTTTTTTGTAAAACGACCAGAGTCAACGCGGGCCTCCCGCTCGCTCGTGAAATTCGGCTGCCTGGAGTTTCGGGGCCGACGTGGATAGCACGGGAAACGGCCACGCCTATGCAAAACGCTATGGAGGCGCCAATCCAGGGCAGGTTTAAATTTAACCGCTGTCTCTAACTCTATCATATTAAATATCACGATCAAGGACAAGGTCACAAGGGCCATCAAGATTCTAAAATTTTATACACGTATACTAGGGCCTATTTGAAGGAAATCTACAGCAATTAGTTGCAGTCTTGTATTTCTAGACAAACTTTATGTCAAAAATCATTTCAAGACCGGAAGCACACCAGAAATAAAACTAGTGATCATTGGATCAGACACACAGTTTGCCAACTACAAACAGCTATCCTCACCACAACAATCATGGAGATTCACTCTAATGTAGACATGTATTGCAGTTCACTGCTGAAATGAATTGAGACAAAAATATCAATGTATCATGAAGCACTATATTCCCCCATAGAACATCATACCCCCCCAAAAAATACCATGTGCATTCAATGAGAACATACCTGGAAAGCTCAAAGCAAGGCTAGTGCAACAACCAGCTATTCCAGCATTAACAATGTCATCTTTGCCACGCAGCCTTCTCAACAGGCACACAACTAGACAATGGACGCCAGAGAGAACTGCAAAACTTGGCAGAGGACCCTGGGTGCTGAACAAGCCCTTAAATCCCCTCTTAGTGAACAAACCTTGTCCATATCCAATGGTAGACACCAAATGAACTGTTGGTAGTGGATGCATGAGTGTTGCTGCACTCTGAAGCACGGTAGACAAATCATGATGACTAAAAGCAACTTCTTACATAGCTTGAACACGACTTTGTCCAGAAGGCTTCACTAACTCCTCCCTGTCAATCATCATCCTAACTCTCTTTGCATCCTCAACCATTCCGGCCTTTGCATATATATTTGACATAGTCACAAAATTTCCAGGGTTATCTGGCTCCAATTGAACCAGTTTCTCAAAAGCGATCTGTGCATGATCCACATCATGGTGCATCCTACTTCCAGATAACAAAGCACCCCATACAACTGCATTTGGTCTGATTGGCATCTGATCAATAAATCCAGCAGCCTCTCTGAACCTCCCAGCTCGTGAAAGCAAATCCACAATACAAGCACACTGCTCCATAGTAGGGATGAGGGCAGAATTTTCCACAAACCGCTCAAAAAGCGCAAGACCTTCATCAACCAAGCCACAGTGGCAGCATGCCATGAGCAGAGTTGTGAATGTCACTGAATCTGGCTGCATCCCACAACGCAACATTGCATCCACAAGTTCAAGTGCCCTCTCTCCATGCCCATTCTTTGCGAAAGCACCTATCATCACATTCCATGACACAACATCCTTCCGTTCAATCTCGAAGAACACATGTTCTGCATTGTCGACACATCCAACACGTGAATACATGTTCATCAACGCATTCCACAGAATTGCGTTTGAACCACTATCACCATGGTTTCTCACCATGTGCCCATGGACCTGTCTTCCAGACTCCAAATCACAAGCCCCCAGCACAGCAACCGCGGTACGGGCATTCCCTCGAACACCTCTTGCGCGCATCTCCCGGAAGCAATCCCACGCCTCGCCATTCATCCCGGCACCAGCGAACCCCCCAATCATCGCGTTCCAGGACACCACGTCCTCGCCGTCCATACGATCAAAGATCCTCTTGGCCGCGCTCACCCTCCCACACATCGCATACAGCGCGACGAGCGCCGGGCCGGCCGAGGCGTAGAAGGCCAGCAGTGGCGCGGTCTTTACCCCGTAGGCGTGCGCGGCGCGAGCGGGGAGGGAGGCGGATGCGCGGCGGCAGCAGGAGACGACGCAGGAGAGGAGCTCGGCGTCGGGGCGGGCGACCGCGGCGGCGGAGAAGAGGGAGAGGGCCTCCCGGGGGCGGCCGTGGCGGGAGAGCGCGGAGAGGATGGCGGTGTAGGATCCGGTGGAAGGGTGGGGGATGAGGGAGAAGGCGCGGAGCGCGCAGGGGAGGAGGCCGGAGAGGGAGTAGGCGGAGACGAGGGCGTTGGAGGCCGGGAGCGAGGAGGGGAGGACCCCCAGCTTGAGAGCGGCGGCGTGTAGGGTGGAGACGGCCGGGGCGGCGGCGCCGGGGGTGGTGGCGGCGGAGACGAGTAGGCGAGGGAGGGAGAGAGGGTCGACGGGAAGAGCGCGCCGCTCGCCGGCGGCGGGGGCCGAGGTCGAGCACCTGGCGCGTCCGAACATTGCGCGCTCTGTAAATCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0199100.1 | 3 | 4472775 | C | T |
| Osa03LNT0199100.1 | 3 | 4473260 | G | T |
| Osa03LNT0199100.1 | 3 | 4473571 | G | A |
| Osa03LNT0199100.1 | 3 | 4474090 | T | C |
| Osa03LNT0199100.1 | 3 | 4475734 | A | C |
| Osa03LNT0199100.1 | 3 | 4476050 | G | A |
| Osa03LNT0199100.1 | 3 | 4476113 | A | G |
| Osa03LNT0199100.1 | 3 | 4473407 | A | G |
| Osa03LNT0199100.1 | 3 | 4475801 | A | G |
| Osa03LNT0199100.1 | 3 | 4475178 | T | C |
| Osa03LNT0199100.1 | 3 | 4475242 | A | G |
| Osa03LNT0199100.1 | 3 | 4475454 | A | T |
| Osa03LNT0199100.1 | 3 | 4473510 | T | A |
| Osa03LNT0199100.1 | 3 | 4473556 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0199100.1 | osa-miR5143b | Cleavage | 4.0 | 20.196 | 1 | 24 |
| Osa03LNT0199100.1 | osa-miR1424 | Cleavage | 5.0 | 16.133 | 1 | 21 |
| Osa03LNT0199100.1 | osa-miR1430 | Cleavage | 5.0 | 12.554 | 1 | 21 |
| Osa03LNT0199100.1 | osa-miR1846d-5p | Translation | 5.0 | 7.247 | 1 | 22 |
| Osa03LNT0199100.1 | osa-miR2865 | Translation | 5.0 | 14.378 | 1 | 22 |
| Osa03LNT0199100.1 | osa-miR2878-5p | Cleavage | 4.5 | 12.121 | 1 | 24 |
| Osa03LNT0199100.1 | osa-miR3979-5p | Cleavage | 5.0 | 15.301 | 1 | 20 |
| Osa03LNT0199100.1 | osa-miR5143a | Cleavage | 4.0 | 20.196 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0199100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199100.1 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0199100.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0199100.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)