© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0199500.2
GAACTCGAGACACCGTAGTCAAAACATAGCAAGGATTAAACATTTTTCCTTACACAAACTATCTGCAGATTCTAGACCTAGCTTCTCCAACTATCTGAAGCTTTTCACGAGCTACATCATTTTGATACATTTTACAGAAGAATTACTGTACAAAACGCATACAAAAATTATTGTACCAACCAAACTTCAAAACATACAAAAATTTAGCAATGCAACTACAGGTTATCGATTTGGTAATGCTATGTACAAAGACCTGGAAGTAATTTACAAGCGCATACACAAGACGTTAGATCCTAGAAATATCCAGGCGTTGGCATGTCGTCATCCCACAGTTCTTTGAATTCGCTCATCAAAAGGCCTTCATCCATCTCTGTCGACTCCTCGAGCATCTTTTCTTGCATAGCCTGGGATTCCTGCATTTTAGTTACCACCGTCAAAATCCTCTGGTACTGATCCCTGGCATCTGGGTATTGAACCATGGATTTCACTCTGGCAAGAGCTTTCTGTAGCCTTTCTTCAGTCTGCTTCCGTCCTTCTTGTAAGAAATCATAGTCATTCTCGGCAGGTCTGTTTTGGGTCACGTTGCCACTGCTGCTGCTAGTACTCTCTGTGACTGCATTTTCTGTGGGTCGAAACCCACGCAACCCAGCACCTCGTCGCCTCCAGCGCAATATAACCTTCTCCACTATCCCAACAGACCAAATTATTTTGCGATAATGCTTTCTCACTTGGTGACCTCGCACATGCGCCTGGATCTTGACGATTCGCTGTCTAATAAGCAGAAATTCTTTTCTTCCCTTCCATCCACGGAACTTGTTTTGTATTCGAGTCGCAGCAGCATGCAGAGGATCAAGCTGTGCAGGTTTGGATGGTTTAGCAGACAAGAGTGACATGGCACGCTCATCTGATATCGCACCATTTTCATCCTCATACTGAACTGCTTGTTTTCTCTGGAAGGATTGCATCCTAAAAACTTGGTATATCCGGGCAGCAGCTTGGGCGGCATTACGAACAGCACCTAGTGAATCTCCCATAGATCCAGTCTGATGGCCTTCAACTGCCAAAGGCGAGGCGCTTCTATCAGCAACATTTACAATGCCAGGTAGACCAGATATTTCTCCTGCACTGCTACGCATGGCTTCCTTTAGATTGAGAGTCTGCAGATGACTTGTTAAAGAAGACTCTGCTAGGAAACCAGAGATTCCCTTGTGTCCGTTGGCTGATGCAAGATCAGCTGGTGTGCTTCCTGAAGGGAAACTTGGTGTTGGGTCTGTTACAGCTCCAGGAGCTGCACCTAGTGCTATAAGTGCAACGACTGTCCGCTCTCTTCCACAAAATGCAGCCCAGTGGAGTGCAGTCCATCCATGAGCATCTCTGAAGTTTATATTCACACCAGCAGCTATTGTTGGTCTTATTGCCCAATCGTACCCTAGGGCAGCTGCCAAATGAAGCACACCCTGCCCCTCCTCATCTAACATACTGGGACCTTTGCCTCCATCCCCTACTTTATGGAGAAGCCAGATATGCAATTTTTCCTTAATGCGGTTTTGAAGGAACTGATCTTGCTTATCATCTGTGGCAGGCTCATTATCATCAGCCAACTTTAGCAACTCAGACCAATCATCATTGTTCATCATCAATGAACTTATCTTCTTGCTCAAATCAATAATCTCCTTCGTGGGGTTAGACAGAGTTGTCTGGATCTCATCCTGCTCCACAGACAATAGTTTATCAAGACGCTTCTGGAGATATATTTTGTTTGTAGAACCAAGTGGACTTGGAGCATCCATGTACTGAGGTCGGAAATCAAACTCCCGTACTTCACTGCAGGCCAATCTATTGGAGCAAGTCACATAGAAAGGGACCCTGCCAGGCTTGTGTGAGGGAGAATGACATACAAGAGTATCATCTGCTATAATCTCAGCTGGGACTTCAAATTCTCCAAACATGCATGACCATTTTAATCTCTTAACTTCATCAGAACTTAAGAAATTACCTTTAATAAATACCCTAGTCTTTGAACCTGCATATGTCCAGGTTGGAGAAAAATCAACTATAGTAAACAGCTGATCTTGTGCAAGCACTGGTCCCAGAGTATACTGATCACTGCTTGATGCTTCAATGATATTGTCAGCTTCTTCACTGTTCCAGTACACTCCAGAACTAGATGTGATTTGAGAATCATCTACTTCAGCAAGCTCTTTGCTCATCCATCTAGTGAAACTGTCATTTTTCTTAAAACTGTCCTTTATGATATCAGAAAGACTAGATGATTGAGTTTTCAAGAGAGGGTAATTAATGGCTTCCTCCAAAGTTTTATCATTTTGTTGAAAGCTGTCCGCTGTAGCAAATGTACCACTTGCATTTGGAATCTGCCATGGAGTTTCTCCATCTGTATCATCACCATCTACATCCTTGATACTCAGTCCATTGTTGTATACTTCATCAAATGTGAAAGATTCAATTCCTGGGCCTCCTGTAAAAGGAGACTGTTCGGAGGGAACAGGAGCTTGGTAAAGAGGAATTTGATGGGTCCCTTTGTCAGGTTTCATTGCTTCAATCCATAATGATAGATCAAACTGACTATTAGGGCCATTAAATGCAGTCCCAAGGTCTGACTCGTTAAGAACCACGGGTAAGTTATCTTGACCATGAGAATAGAAGCCTGTATTAGGTGCTGTAGCCTGTAATCCTTGATAATTGCCTACAGATGACGCAGGAACATAAGAGCTGAATATAGAATCATCAATCACAGATCCACCTCCATTTTCATGCTGCCGCATCCGAGAGAAAGAGTTGTATCTGGCTCCTCCCGAATAAATATCTGCTGCACCGAATTTTGCTTTAGATATGCTGATTCTGTTTCATCATATTCAGAGGCCTGTCCGCTAACTGAGCTTTCTCCTTCGGTAGTTTGTGAAGGCAATTGACTTAAAGGGCTATCCGCATGAGATGCTTGCAGTACATCATCATGTCCCGTACTACGAGAGCTTAATTTTCCAGCCTGATGGTCATACCCATATATGTGCAGGAAATGAAACTTCAGCTTATAGATGAAAGAAAATAAACGTGAAGACAACAAAGAAATTAGGTAACCAAGGTAGAAAAAAGCAAGCAAGAGCGTTAAATCTACCACTAAATCCAACACAAACAGAGGGTTTCCATAATAGGTCCTCAAATGTAAATTAAACAATGTTAAATGTTAATATAGAATATTTAATATGTTTATCATAAGATATATTATACATATGGTGCCCTCCTGAGACTAGTTAAAAAATATACAACTGGACAATGTTCTTTAAAAATTGATGGTACCATATCTAACATTATTAGTTAATTTTACTAAAAGACTTGCTGCTGTTTTAAAAAATATTGTCTGTTTTCAATATTCACCACACTATTAATAATATCAGAAGGGAACATCTAGGACTAACTTAACATATCATGGTGCTAAAGCAGTTCTGTAACTGCCATATATGTTGTTTAGCTACTGGTTTAACATAAAAATATCACCAAACACGTGGGTCCAGTGAAATGTGGATCACAAACAATTTTGTATAGCATCAAAAGCCAGCTATCAATCAACATGATGAGGTAGTTTTACGAGAAAATCGATAATACTATTAAACAATTTACTTTATATGAAGCTTTCCACTCCTATAAGAGATGTATATAAGATTTAAATTCAAATATAAGATGAACAGATAACTAAATAAACTGCAATCATAGCAGGATTAGGTGCAACCTTGACTTCCAGATAATGTACAAGTACAATGTGCATGTAATCCTCCTCCAACATCCAATAACTCCTCCTTTGGAAATTTATATTCTCCTCCCCATGAGCATAGTAGCAATGAAGCACATCAATGCTTCCAGACTTTAACCTTTCATGGGCTTCTTTGACTGTCTTTCCATCTCTTTTCTTCCTCCAATTATGACCGTCCTTCCTGAAATATCTCAGGACCTTCCGATCAAACAAGAAAAGTGAACCACTTGGAGGCCTATTTGGAGGTTCAGGAGCAATACGGAAACTCCTGTAATTCTTAAGTATTTCACAAATTTCAGTCGGACGTAACCATCGGCGTTGAGCCTCCTTCAGTATCTGCTCAATATCTGTTTAGAAGTCGATGAAATGCAGAGTTAGACAACCGAATATATTTGTAAATGAGAAAGAATTACGCCCTTTTTTTTCAAATTACTACGCATCTAAGCCAACTTTTAGGTCCAAGCCCATCTCCAGAACACAAATACAATTCCCAATCCTTTAGAGCAGTTGCAACAGTTCCCGATCACTCCAGAGTCCAGAACGCTCAGTCTTAGAGACCGGACCGGAATCTCTGCTTTGCATCATCACCTCAACTCCTGTGGCCACCAAAAACTCCGTACAATTCCGACAGAGGAACACGAAAAATTCCGACGAACTCCCCAAGTTTCCAACCACCCACGCAATCAGTAGACTCCAAACCCAAATTCCAAATCCCGCGCCGAACGAACAGGGCCAACAAAACTCCCAGCTCCACCGGCTTCCGCGCCACAAACTCCACCACCCGGAACGCAACCGGAGTACTAGGAAACTAGCTGCGGCGCGATCGCGTAGCGCCGCCCCTCCGCCATCGCGAACAACCCGCCCGCCCGCGCGCGCGCCGGCCAGCAGATTCACCGCTCCTCCTCCTCCTCCCGGATCGCGAGCGGGCTCCCACCACCTCCCTTTCCCCGGCGATCCGGGGCGAGATTTCGCGGGGGGTTTTGTGCGGGGGTTCGACGCGAGAGACGGTAGGTGGCGGTGTTGCTTGGGGGGGCGAGGCGAGAGGGAGAACAATTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0199500.2 | 3 | 4727142 | C | G |
| Osa03LNT0199500.2 | 3 | 4728049 | C | T |
| Osa03LNT0199500.2 | 3 | 4728696 | A | G |
| Osa03LNT0199500.2 | 3 | 4729235 | G | A |
| Osa03LNT0199500.2 | 3 | 4730560 | C | G |
| Osa03LNT0199500.2 | 3 | 4731640 | A | T |
| Osa03LNT0199500.2 | 3 | 4732142 | T | A |
| Osa03LNT0199500.2 | 3 | 4732524 | A | T |
| Osa03LNT0199500.2 | 3 | 4727033 | A | G |
| Osa03LNT0199500.2 | 3 | 4728715 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0199500.2 | osa-miR5532 | Cleavage | 4.0 | 13.802 | 1 | 22 |
| Osa03LNT0199500.2 | osa-miR5540 | Cleavage | 5.0 | 17.72 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5543 | Cleavage | 4.0 | 20.114 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5796 | Cleavage | 5.0 | 18.616 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5802 | Translation | 5.0 | 10.204 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR5804 | Cleavage | 3.0 | 15.287 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5817 | Translation | 5.0 | 15.349 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR5820 | Translation | 3.5 | 12.728 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5830 | Translation | 5.0 | 13.358 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR6255 | Translation | 4.5 | 16.716 | 1 | 22 |
| Osa03LNT0199500.2 | osa-miR171i-5p | Translation | 4.5 | 16.909 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR1425-5p | Cleavage | 3.5 | 13.777 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR1442 | Cleavage | 4.5 | 24.465 | 1 | 20 |
| Osa03LNT0199500.2 | osa-miR1442 | Translation | 5.0 | 13.521 | 1 | 20 |
| Osa03LNT0199500.2 | osa-miR1848 | Cleavage | 3.0 | 20.221 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR1871 | Cleavage | 5.0 | 12.593 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR2093-5p | Translation | 5.0 | 21.804 | 1 | 20 |
| Osa03LNT0199500.2 | osa-miR2095-5p | Cleavage | 5.0 | 13.916 | 1 | 22 |
| Osa03LNT0199500.2 | osa-miR2095-3p | Translation | 4.5 | 17.836 | 1 | 20 |
| Osa03LNT0199500.2 | osa-miR2120 | Cleavage | 5.0 | 9.261 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR2118d | Cleavage | 4.0 | 18.667 | 1 | 22 |
| Osa03LNT0199500.2 | osa-miR2118o | Cleavage | 4.0 | 18.667 | 1 | 22 |
| Osa03LNT0199500.2 | osa-miR2873a | Translation | 5.0 | 7.12 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR2873a | Cleavage | 5.0 | 17.342 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812k | Cleavage | 5.0 | 18.77 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812k | Cleavage | 5.0 | 12.147 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812l | Cleavage | 5.0 | 18.77 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812l | Cleavage | 5.0 | 12.147 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812m | Cleavage | 5.0 | 18.77 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR812m | Cleavage | 5.0 | 12.147 | 1 | 24 |
| Osa03LNT0199500.2 | osa-miR2873b | Cleavage | 4.0 | 13.061 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5147 | Cleavage | 4.5 | 12.89 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5338 | Cleavage | 4.0 | 12.537 | 1 | 21 |
| Osa03LNT0199500.2 | osa-miR5340 | Cleavage | 5.0 | 15.1 | 1 | 23 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0199500.2 | 3 | qtl3.1 | Resistance or Tolerance | Drought tolerance | RM7332 | RM545 |
| Osa03LNT0199500.2 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0199500.2 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199500.2 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0199500.2 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)