© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0200300.1
GCAAGGCAAAGCGATTTTTCACAGTTCATTGCAAGGATGGGTTGCTGAGATAACATTACCCCATCTACAATAACAGGGTTTGTTGCGCAGACTTTCGCGTAGATAGTTGCCTATACACAAAAGCTGGGGCCTTTTGCCAATGTGTAGCAAACAAAATTGTGCCTCCCAAATATGAAGGGAAACACACCACACCGGCCAAAATCAACTTTCCATATTTTAAACCTGCATTGAAACTATAATGCTAGTTACAGGTATCTTGTGAGGATTTCATCTTTGATGAGGTCAGATCCTGATGTCTTCAATGTCTGAGAGAAGGGTGGCACCACCCGCTGATCTTTCATCGGGGAGGCTAACCACTAGCTGGCCACAGGCGCCAGCTATGTCTTGACCCATTTGCTGGCGAATAGTGGTTCTGATGTTGTAAATTCCTCTTAGGATCTTCTGGAACTTCTTCACATTATGTTCGCTGCTAGTCTTGAAATTGTTTGATGAGCCAATGGGATTGAATGGTATCAGATTAACAACCGCTTTAAACATTTCAAGTAATTTACCAAGCTGGTGGGCATGCTGCTCCTGATCGTTAACTCCATCAAGCATGATGTACTCAATAAAGATGGTCTGCTTGCTCTCATTTTGATATGATTGCAGTGCATTCATTAGCTTTACTAAAGGAAAGGCCCGGGCAGCAGGCATTATATGACAGCGTATGTCTTGGTCAGGAGCGTGCAAGGACACAGCTAGATTTATATTGGGAAGATCATTATTGAACTTATTGATGGAATGGATAATCCCAACAGTAGATACAGTAATTCTCTTAGGTGAAAGCTGGAATGGAGAGCCTATCAAGACTTGGATAGCTTCAACCAAAGCAGTATAGTTGTTTAATGGCTCCCCCATTCCCATGAAAACAACATTCCGAATCTGAGAATAACGGGATGCATGAACCAACTGCTCCACAATTTCTCCTGAAGACAGATTGCTTTTGAAGCCCATCGTTCCTGTAGCACAGAATCTACAGCCCATCTTGCATCCTACCTGTGAGGAGACACAGAGGGTTGAGCGCACGCCACCAGGCCGAGGCTTCCCGTCATACTTCCCCAATCGCGTGTCATACCGCATGATCACTGCTTCTACAGATTCCCCATTCCTAAAACATCTTGCAGACTTCTCCTGATCCCATAATCACCATTAGTACTGCATGTTCAAACCACCGAAATGTGCAATCTACAAAATCCCCCAAGTTTGAGCATACAGCACGAAAGTGGCACAATCTAATTCAATTCACCTTGAGTCGGATAAGGAGCTTGGTAGTGGTGCGGTCCTTGGACTCCGCGGCGGTGGTGAGCGTCGACGTGGTCGGCTGGAACTTCTGCCGAAGGAGCGCGTACGCGGCCGCCGGGAGCGACGGGACGGCGTCCAGGTCGCCGCACCTGGGGTTCTGCAACACATACTTCCAGATGAGAGGGATGAAGTGAGGGGAGATGCCGGCCGCCGCGAACTCCGCGCGGATGTAGGCGGCGTCGAACACGGAGCGGCGCGGCGGAGGCGGCGGCGGCGACGACGAAGAAGACGACGACGACGACGCCATTGGGATTCGGGAGGAGTGGAGTGGGGGGAGGGGATGCGGCGGGGGGGTTGGAACTTGGAAGGCTGGGGCGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0200300.1 | 3 | 5354539 | T | A |
| Osa03LNT0200300.1 | 3 | 5355100 | G | A |
| Osa03LNT0200300.1 | 3 | 5356783 | C | T |
| Osa03LNT0200300.1 | 3 | 5356837 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0200300.1 | osa-miR5829 | Translation | 5.0 | 17.599 | 1 | 24 |
| Osa03LNT0200300.1 | osa-miR5830 | Translation | 2.5 | 15.797 | 1 | 24 |
| Osa03LNT0200300.1 | osa-miR166k-5p | Cleavage | 5.0 | 19.566 | 1 | 21 |
| Osa03LNT0200300.1 | osa-miR444b.1 | Translation | 5.0 | 19.44 | 1 | 21 |
| Osa03LNT0200300.1 | osa-miR444c.1 | Translation | 5.0 | 19.44 | 1 | 21 |
| Osa03LNT0200300.1 | osa-miR1854-5p | Cleavage | 4.0 | 10.993 | 1 | 21 |
| Osa03LNT0200300.1 | osa-miR1866-3p | Translation | 5.0 | 19.638 | 1 | 22 |
| Osa03LNT0200300.1 | osa-miR2932 | Cleavage | 5.0 | 16.216 | 1 | 19 |
| Osa03LNT0200300.1 | osa-miR5076 | Cleavage | 3.5 | 17.369 | 1 | 22 |
| Osa03LNT0200300.1 | osa-miR5497 | Cleavage | 5.0 | 16.231 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0200300.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0200300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0200300.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0200300.1 | 3 | nan | Morphological trait | Dwarf | RG100 | RG450 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)