© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0201200.1
GACACCAGAAAAATGAGTACCAACTTTAATTTTTTTACTGAGTCAAAGGATGCTAGAAACAGAACCGTTCAATTTGCTGTTGAGGATTCGCCTAAAATCTAGTACATCTAATGTGAAAAGTTTTGTTGTATGTAAACTAGAGTACACGATCTCTCTTCTACCTGTAGACAAGAGAATATCTCATTCATTCAGTTACATTTGTCCACCAATAATTTTCCATGCTTTTCAAGGTTGAAAAGCCAATCCTTCTCCTTCCTTCAGCATTAATAGTCATCTTTTGACGGTAATATTACAGAGAAGGGTGGCACTCTCAGTTAATCCTCGAGCTTATCCTTTAGGTTAATTCTTCATGAAGATATTCAGGGTTCCAAGTTGTATGGCTTGTTCAGAAATCAGAAGGTTGGTGCTGCCGATATCAGGTAGTGCTATGATAAATCTGATGTATCGTCGGACTGAAGTAAATTCTGGTGAGGCCGCTAAAAGTATTCGGTATCAGCTGCCAGAGCACAATTGCTTTCTGGGTAGCTCATCACCAAACCAACCATAAGCACCGGATTCAATGCGACCAGCCATCAGATTAGGAGATCAGAACGGACTACCTGCGAGTTTGAGGTGATGATGGTTGATCAGGAGATGAATGAGAGGAGCCACCCCTAAATGCAACATGCCTTTGCCCATAAAACTCATTGGGCATTGCTTGGCGAGTGGGTCGTGGCATGTCACCACCATCAGCTGTAGGAACTGGCCCAAGTGAACCAAATTCAAGTGGTTCAGATGAAGAACCGTGATTTGTGCCTGGTTCACATGAGTAGTACATGAAATATGGAGCTGAAGACCCAGAAAGGGCACCGATACCATTTGAAGCAGATGGTGATGGATCCCCATGTGTCATGTTCCCTGGTCTGCGTATATAGTTTGTTGATCCAGAAGATTGGGCGCCTGTCTCATGCCTGTATGAATCATTTCTATAAGATCGCCGCTGCCTATCATACTGGTTTTCATCTGCTGCTTGTCTATCCGATCGTATGCCAGACCTCTCTGAGTGGCTACGTCCATAGCTGCGGCCAGGATTTCGTTGTTTTGAATTTATCCAATTTCCTTCTTTATCATTATGGTCACCCTTGTCAGTGTTATAATTTCCTCTGTGGTTTCTTGAGCCTGAGTGTCGGTCCTTAAATGGAACCTTAGGATTTGGCAAGTAAGTTCCTGTGCCACCACGGTATCTGGGCGCATCCTCCGTGTGGTGCTGTGGACCACCAGTAATTCTTTCAGAAGAAGGTTGTAGAGGCATCATAGGATAGATTCGTTGGCTGGGGGGGACCATCTGGGTCCAGTTAACATTTGTTGAAGCTGGTCTGCCAGGCCCATCCCATGGAACATGGCCCTGCAAATACATTGGTGGCACTGCAAAGGGGTATAACACAGGATTCATGGGGCGCGGGTTTTGGCATGACCGTCCATATTGTAAATTACACCAATGGCTATCAAAATCGCTGTTCAAAATGTCAGGCTTTTGCTCTTCAGATGGATCACCTGCAGTACTGGATGAAGCTGTTGAGGTAGCATTGATATCAGGATGGTGAACATTGTTGAGTGAACTAAAATTTTGGACAGCAATATTGACAGGAAGTTGATCAACCCCTTCATTCCTCTCAAACTGTGGAACAGATCCATCATTCCCAGGAGCATATGGCAACATCAAAAAAGGAACCGCTGGACCTGTTTGAATAAAAGTCAGTCCGCCATTACCAGATTGTCTCTGCTGAGGGGATCCAATAAAAAGAGGTGCAAACAGTGGATTAGGCATGCCAATCTGTGATGGTTCAAAATCATTTGGCACTTGACTAGTTCTTGATGCTGTTGAGCCAGACCCTGTTATTATGTCAGAGGCCTCATGTCTAATGTTTGGTACTATAACCCCATTCCGGGCACCATCATCAACCTCTGGGGGGATATGCTCAGAAGCATTTCCAGTCTGCCAACCAGTATTATTTTTGCTATGTGTAGTTGTGTCAGGTGCTGCAAAGGCAGGCCTTTTTCCCCATTTGTCCCTCAATGATCTTGTTGTATTTCCAGCTGATTCACCCCATGAATTCTCAGGCATAGCTTTGTTTCTTGACAAACCGGATTGTGAAGAAGGGATTCTTGCATTTCCACTACCTATTCGAGTATTTATGCTGGCTTGTCTACTTGTTTGGTTTTGAAACATGTTGGTATAATTCTCTTCTACTGCTCCATTATCCTCAACAGCAATCTCTCCCTGTCTTTCAAAGGGGGCACCAGATACACTGTTAGGTGAAGAGGAATGCTCTTTTCCATTAAAGTGGCGCATCTGTGGATCTCTTCCTTGATGATTAAAATATCTAGGAAATCCAACACCATACTCATGCCAATTGTTGCCATCATCACGACTCGCATCTGGTGTAATAGGTTTCTCACTCTCGTTACCTTCTTCGATGTTTGGTGCGAAAGTATGGTTTTGGACATAATGGGCCATGGGTGGTGAAACATATCCATGGATCAAATGCATATTGGACCATGGAGCCCCAATTAAGCTAGTTGGTGGAATTCCAGCAAAATGTTTTGGGGGAAAAGCTGCTGGTGCAAGTAAAGGGGAGGGTGCCACCGAAAAATGAGGCGGCATTTCTATTGGCAATTGAACTTGCCCGTTGAAGTCATGCAATTTAGCTGATGACATTAAATTAACTAGGACTTGCTCCTCTTGCTGTTTATCTGATGCCTCAGATACAGAAGGAAGTTCTTCGTTCATTATGAAACCATTATCTTCGCGGTAGCTGCTTGACACACTGTTTGAGTCAGAAGCTGCTTTCCCACTATAGTGAGATGAACTGTTCATCGAAGACACTGACTCATCCTGTGAAGACTTAGTGATGTGGCTGCTAGAAACTTCTGGAGCCAAGTTGTTTCTTCTGCTATTGTAATCAACCTTCAAAGATTTGTCCATTTCAACCACTCCAGTCCGTCTTCCACGAGAATATCCTTCAACAGAAGGGTCCGTTAGTTCAGGACTAGAGCGGGTTCTTGCAAACCGAGACCTGTTTTGCCCATTTCTATCATTAACAAAGAGAGAATTTGGTACTGTCTTGTTCCTTTCATTTTGCATTGATCCATCAGAACTGTTTCTTTCAAGCTGCTCAGAGACCTTTGTATTGGCATGTGTCACATGAACTTTTTGGTGATGAGCATGAGAATCAGAAGGGTTGACTGTTCTCAGTGAATTTCTCGGGTGTAGAACACTTCTCTGAAGTGGCTGAGAAGTAGCTTCAGGATAGCTATTAGCATTTTCACTGAGATTATCCTGGTTAGCACGAATATTAGGATTTTCAGCGTTTTTCTTGAGTGCCATCGCACTTCTCTGACTATTTGATGCTTCAGCAGGGACAACCTTCAGATGATGCTGATGAACCAGACCTAGTGTAGGTGCATCAGGACGATTGCCACTACCATGTCTTATCCATGTATTTGTGAAGAACTGATTTACTTCAGCAATTAGATCTTCTTTTGGACATTCGAGTAACTTTGCCAACCTTTTCGCCCCAAAGGAAAACGCACTGCGTATCCTAAAGAAATTGCCTTTACTTACACTCCTTCCAAGGTTATTGTTTGTCCGTAAAGGATCAATAACGTTGAAGTGCTTTGAAACAAATGGTTGTTGACCCTGGCTCTCCTGGATGCGAGGTGTAACTGCATATGCATAACTGCATTTATCAAGGAAGGACTTGCTCAGCAACAATTCAGCAGCATCCATCCGTGGTGGCTCCGCAGTCATATCTGGAAGTGAACTTATAGGAACAGGACCCGACAAACTCAAACAAAATTTCTCCCAGTCAAAGTTGCTGAAGAATTCTAAGAAACGGTATAATACCTCCAGTGGTCCAGTAAAACAATTGTTGAACACATGAAAAATGTACAGAACCAGGGTCTCCAATGCATAGGTAGATATAAGACCATGGTGAGCTCCAAGAATACGACTCTCATAGAAACACCATGCCTTTATCAATATAATACTCCTCTTGAATAAATGATTCTGACTGATCAAGGCATCAACCTCTTCAAGGAAACAAAGTGTACACAATCCACCAACTTGATTAAATGATATGTCAACAACAATGTTGTCCACAAGACACTTAATAATTTTTACCTCCGCCTGTATATACTGAACTTCTTTTACACGAAATTCAGCATTTTCACTTTTCTCTTCATGCTCCAATGCATCCCGAACCAAGTTAGCCCAAGTATCCTTCAATTCTTCACTATCACTAAAAGCAGTGACATCAATGTCACCATCAGGTAAGTAAGTCTTCAGAGGGACCGATCCAAATGTGAAAACCTGGCACGAGAGGCAGTTCGTGATGAGGCGCCGCACGTAGTCGTAGACGGCGCGCCTCCGCCGCTCGGAGTCGGCGTTGGGCTGGATGCGCGCGATCAGCTCCGCGGTCCGCACCTCCGCGGCGGCCCACCGCTCGCCGTCGAGCCGCCTCGTGACCCCGGCCGACGCATTGGGCAGGAGCCCGTTGGGCACCATCCCCATAGCAAAAAAACAAAACAACCCGCCGCGGCCACGCCAACCAATGCTTCGCTCGCCGGGCCGGGAACCCAAAAACCCTACACCCCGGGAACGGCGGCGGCGGCGGACCTCACGGCACGGCCCCCGCACCCGCCGTCGGCTCCGCGCGGATCGAACCCCCACCCCCGGAACCGGTGGAAATCGCGTGGGGGGGCAACCTCCCGCCGATGAGCTTCGGATCGGCCTTGCCCTCCCCCGCGCCACCCGAAGCGTCCTGCTCTGCGGCGGCGGCGGCGGCGGCGGCGGTGAGGGGAGAGAGATGGGGATGGGGAGTGGTCGGCGTGGAGGAGAGGAGAGGAGAGGAGGGGAGGGGACGGGAGGGTTGAGGTGTGCAAAGCGAAATGGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0201200.1 | 3 | 5782527 | G | T |
| Osa03LNT0201200.1 | 3 | 5779773 | G | A |
| Osa03LNT0201200.1 | 3 | 5782261 | T | G |
| Osa03LNT0201200.1 | 3 | 5782492 | C | T |
| Osa03LNT0201200.1 | 3 | 5782941 | A | G |
| Osa03LNT0201200.1 | 3 | 5783290 | A | T |
| Osa03LNT0201200.1 | 3 | 5783812 | A | G |
| Osa03LNT0201200.1 | 3 | 5783866 | A | C |
| Osa03LNT0201200.1 | 3 | 5786075 | T | C |
| Osa03LNT0201200.1 | 3 | 5786128 | T | C |
| Osa03LNT0201200.1 | 3 | 5786276 | C | G |
| Osa03LNT0201200.1 | 3 | 5786557 | A | G |
| Osa03LNT0201200.1 | 3 | 5786698 | G | A |
| Osa03LNT0201200.1 | 3 | 5786901 | A | T |
| Osa03LNT0201200.1 | 3 | 5787241 | T | A |
| Osa03LNT0201200.1 | 3 | 5787434 | G | C |
| Osa03LNT0201200.1 | 3 | 5785824 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0201200.1 | osa-miR5543 | Translation | 3.0 | 11.986 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR5788 | Translation | 5.0 | 11.837 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR5801 | Cleavage | 5.0 | 20.791 | 1 | 24 |
| Osa03LNT0201200.1 | osa-miR5815 | Translation | 5.0 | 20.118 | 1 | 24 |
| Osa03LNT0201200.1 | osa-miR5834 | Cleavage | 5.0 | 12.834 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR5512b | Cleavage | 3.5 | 16.584 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR7692-5p | Translation | 5.0 | 20.544 | 1 | 24 |
| Osa03LNT0201200.1 | osa-miR435 | Cleavage | 3.5 | 18.113 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR437 | Cleavage | 4.5 | 18.122 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR530-5p | Translation | 4.0 | 19.989 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR816 | Translation | 3.5 | 17.81 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR444f | Cleavage | 4.5 | 21.431 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR1441 | Cleavage | 3.5 | 19.806 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR1854-5p | Cleavage | 5.0 | 14.434 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR1866-5p | Cleavage | 4.0 | 21.886 | 1 | 24 |
| Osa03LNT0201200.1 | osa-miR1877 | Cleavage | 4.5 | 17.65 | 1 | 24 |
| Osa03LNT0201200.1 | osa-miR2093-5p | Translation | 5.0 | 9.781 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR2098-3p | Translation | 5.0 | 22.694 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR2866 | Cleavage | 4.0 | 14.443 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR2905 | Cleavage | 3.5 | 15.564 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR1862f | Cleavage | 5.0 | 22.445 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR1862g | Cleavage | 5.0 | 22.445 | 1 | 20 |
| Osa03LNT0201200.1 | osa-miR5076 | Translation | 5.0 | 13.041 | 1 | 22 |
| Osa03LNT0201200.1 | osa-miR5506 | Cleavage | 3.5 | 14.103 | 1 | 21 |
| Osa03LNT0201200.1 | osa-miR5512a | Cleavage | 3.5 | 16.584 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0201200.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0201200.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0201200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0201200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0201200.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)