© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0017400.3
CTATGATAAACTGTACAATTTTCTATATATAGTTTTTATCTCTTGTTAGGCTTGCCCAGGCTAAAAAAATTTCTGGCTCCGCCACCGGTAGCTGGAATGAACGGAGTGGACTATTCTGCATGCTGTCCAGACCTGACAAAAATCAGTTCATCTCTGATCCGTCTTTTTTACACACTTGATGTAATCTGTAATATGGATAGACGAGACAATGCAAAACATACTAATGTCTGAAAACAAGAAATAAAAAATCCGGCTAGAAGAGAAGGCAAACATATTTCTTTTCCCCCGTCTTAGGCGGGCATAAATGCAAGAATCCTTCTCTTCAGCAAGTTATATGTGCAGAGTACGCAGTGCCAATCGGAAGAGAGGTATTGCAGGGATCATATGCTCATCCGATCCCACAGAAACAAACCAATAAAGGAATTACATCATACATCTGCCTGTGGTGTTCATGCAATCCACTGGCAGCTCCTCCTTAAAAGTTTCTAACCTCATGAGCATCATGAATTGCTTTATCATGAAGCAGGGAAAATTATTTGGCCGATGCAGAAGCAGAACTGCCTTTGAACTCATAAACAGCTGTACAGGATCTAGGCTGATTACACACAACACCAAGATATGCCAGAGAAGGGGAAAACTGGCGAAGGGTGCAAAGTGGAGGTGGCTCTTCAGGTCAGATTTCGGAGGGAAATTGTCCAGAGAAGATCTGCATCGGATTGTACAGTAACCTTTTCTGCGTGAACAATGTTGGATGTGCTTATCATACTCCCAAATCTCATCTTCGCTTCACTCAAGTTCCACTTCAGGCCAGTGGTTGTAGTGCTTCCAGATGGTGCTCCAACAGGAAAAAGTCCACAATGTGGCCCTTCAACAGATGACTCAATATAGATCTCATGCTTGTGTGTTTTGGGAAGAAGCCGAATCAAGCAGTCATCTGATAGAAGAACAATCCTCATGTCCGAGAACAAATACAGAATGTTGATATTAGCAGCCTCATGATCAAACCTTCCACCAAGTGCTCCAGTCACAAGAACACAAAGCTGCAGTAGTTGAGGAGCTTAATTTTCATAATAATAATCGGTATATATTTGTTTTTTCATGATCAGGTGTACAACGATGGATCCGAGAAATACACTTGTGCAAATCTGTTGTCTCTTGGTTATGTGATTTATCAGAAATTTTAGATCCCTGGCTAGAGTAGAACTGTTTCACTTCTGGCCTTATAGAATCCATATCTCCCTCAATTATTTCTGGAATATACCTTTTTCGGGTGCTTTCATAGTCTGGATCATTAGTCATCTGAAACATCTCATCGAATATACGATTGGCACCTCCATCAGCACAGATTCTTAGCTTTGCTGCTCATGAGTCCACAGGCGGGGCACGAATCGTGGAAGGTTCTGATTAAGAACAACTAGAGCATACTTCTTTGCTGGAGAGTTGGCAGGCTGATGCAACTTTGGAAGAAGGAAGGTTGAAGAATGCACCATAACCTCCATACTGCGTATTGCGCGCCCCAACATCTTAACCTCAAGAAGGTGATGTACCAAGCTAGTGCATAAACAAGAATTATTTTAAGAACAAAAAATCTATTTGTAGCGAGAATATCGAACTATGCAATGCATTCATACATTAAGTATACAGGCAACAGGAAATCTGTTGTCCATGTGTTCAGTTCTAACTACCAATTGTTCCATCAACAGGTCAGCAAATAATGACCTGTTCTGTTGCATTTTCAGGCTGCAGCGTAATTTAACAGGTTCTGGAAGCCGAATATTATTTTCAGGCTGTATGGAAGAAGAATATTATTTTCTTCCCTACAGAATTTGGAGGTTATTTATTGTAGCATACTAACATATAAGCGGGAAAACGGTACACTATTTCTCATCCTACTACTTTGGGATGACGAACAATATTGAACCAATGGGAGCCGGTACGGCAGTAACAACACACCCAACATGATGAACCAAAATGTTCAGTGAAATTCCACTCCAGGTTGCAATAAACTGGATTCTGCCACTGCCGGGATTCCGTAAATCATGCTATTCTTACTTTCTTAATATCTTAATTAATGGAAGAAAAAAAATAAAAGAGGGACTAAAGCATTAGGGAAATTTACTCAAAATGGCCTGATCACATTACTCAATTATCTCCTTTTCAGGAACCAACAGCGAGCACGCGGCCAACGGAGAACAATAACAGAATCCTGCAAAATTCCGTCCCTCCAATCGAATTCTAGTATTCTACACACCATTTTCTCCCTCCCCCCACCCCCCCCCCCCAAAGAAAAAAAAAACTCCTTAATCAAACCGATTCACGATACTAGTCAGACGGACGGACCTCCCCAACGCAAAGAGTCGAGCCCATTCCCAAGAACTGGAATCTCTCCATCCTCAGACCCGATCACCGCCAAACGAACCCTAACGCGACAAGTAGAGACAGGCGCAGGAGCGAACTCACCTCGGACCGCGCGTGGATCGAGGAGGGAGGGAGGGAGGGAGGATCAGAGGATGCGTGCGGCGGGAGGAAGGGAATGGCCAGAACCAGAGGCAGAGCCAAAGCCTAGCTCGCCGCTCGTCCGTCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0017400.3 | 1 | 14392927 | C | T |
| Osa01LNT0017400.3 | 1 | 14392991 | T | C |
| Osa01LNT0017400.3 | 1 | 14393092 | T | A |
| Osa01LNT0017400.3 | 1 | 14393458 | A | G |
| Osa01LNT0017400.3 | 1 | 14393538 | A | T |
| Osa01LNT0017400.3 | 1 | 14393662 | A | T |
| Osa01LNT0017400.3 | 1 | 14394157 | G | A |
| Osa01LNT0017400.3 | 1 | 14395282 | A | G |
| Osa01LNT0017400.3 | 1 | 14395314 | A | G |
| Osa01LNT0017400.3 | 1 | 14395796 | T | A |
| Osa01LNT0017400.3 | 1 | 14396122 | T | A |
| Osa01LNT0017400.3 | 1 | 14396256 | T | C |
| Osa01LNT0017400.3 | 1 | 14396317 | C | T |
| Osa01LNT0017400.3 | 1 | 14396364 | A | G |
| Osa01LNT0017400.3 | 1 | 14392921 | T | C |
| Osa01LNT0017400.3 | 1 | 14396457 | A | G |
| Osa01LNT0017400.3 | 1 | 14396584 | G | A |
| Osa01LNT0017400.3 | 1 | 14397097 | G | T |
| Osa01LNT0017400.3 | 1 | 14397351 | T | C |
| Osa01LNT0017400.3 | 1 | 14393755 | A | G |
| Osa01LNT0017400.3 | 1 | 14392043 | G | C |
| Osa01LNT0017400.3 | 1 | 14398323 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0017400.3 | osa-miR5827 | Cleavage | 3.5 | 20.679 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR167e-3p | Cleavage | 4.5 | 23.192 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR167i-3p | Cleavage | 4.5 | 23.192 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR168a-5p | Translation | 4.0 | 15.655 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR1866-5p | Cleavage | 5.0 | 14.371 | 1 | 24 |
| Osa01LNT0017400.3 | osa-miR2097-3p | Cleavage | 3.0 | 21.118 | 1 | 22 |
| Osa01LNT0017400.3 | osa-miR2864.2 | Cleavage | 4.0 | 12.239 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR2922 | Cleavage | 4.5 | 24.413 | 1 | 20 |
| Osa01LNT0017400.3 | osa-miR5513 | Cleavage | 4.5 | 14.03 | 1 | 21 |
| Osa01LNT0017400.3 | osa-miR5076 | Cleavage | 5.0 | 23.478 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0017400.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017400.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0017400.3 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Osa01LNT0017400.3 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0017400.3 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0017400.3 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0017400.3 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)