© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0202400.1
AAGAAGTAAATTACCAATTTTAAAAGTTCACGATTATCATGTGGTAGAAAATTACAGATGGCGTGGATCACAAGAGCTAGGAACAAAAATTTACATTGCATCACTAATTTATTGGAGATTGATAAGCAGAACAGTCGTGACATATCTCCAAATACTATTTTGCTCATTGGCCTTCAATTGAAAAATTACAGAAACCACATGAGCAGTGAAACAGCTAAAAGAAAAGGGAAAATAATAGCTGAAAGAGGGAAACGAGCTTTCTCCAACAAATAATTGCCATCCCATGACAAAAATCTAGGAACCAAACAAAAAGATTACACTCTATGTACCCTATGAACCTCCTTTGAAAAAAAAATAAAGGAGACTAACCAAAGCCCCAACAAATTTGTGACGATGCGTCTTGCAAATGTATAATACATCACAATCAACCAAAATGCATCATGAAATGCCTCTGGATGTTCTCGAAGGGGGCCTGCCAATCTCTGATGTCGAAGAGGAATGTGCTTCTTCGTATCTTTGAATTTCCTGTGATAATACTATAGCTGAAGCAGATTTTTGGGATTGCAGTTGATTCTTTAGATGAACTCTGTGCTGCTGCTGCATGCTCTCAAACTGGTGGAGCCGGGATGGGAAATTGATTGCATTGTAGCTCTGAGTGTCGTGATTTCGATTACCATCTTCTGTCACTTGTAGAATCTGAGAGTATGGATTTGTTGAAGATGTGCGTTTCAAATTTTCACTGAAAGGCACAGTCTTCAGCCGAGTTCTCAAGATCTTGAAGGCTGCACTTTGCTGAGGCAGTAGCATCAGGAGACCATAAAGTGTTTTGAGAAGCCAGGTATGTTTTCCAGGCTCAAGAAGCTGCAAACGTAAGTAAGCAAATACAGGAGTCTCTAAAAGACGGATTAATTTGTCTAGTTGCACGAGAAACTTCACATTTATATCTTCCTCTCCCAAAGACTGGATAACAGAAATTGCATGATTGTATGCCTGCGCAAGTAGACACAAGCTTATTGTAGCCATCGGAGAGTGACACCAAGAAGCGTATAAAGATTGAAATAAGTCCTTGCCACAAGAATCAACCAATGTTTTCTTAAGAAGAGAACGCAGCTCAGCAAGTTCGGTTGATGTGAGCAAAATTAAATTCAAGGCCTGAACCATGGTGGATGCAAATTCAAGGTCACCTTCGGTCTCAAGAATAGTAGAGAACTCTCGATAAACTTTTTCAGCACCCAAAAGAATACAAAGTCGACGAACTATCAATGCGCCACGTTTCTCCAGTAGAACATGATTGTTGTGAAAAGTGTGGATTAAGTAGGATACAAGATGATGAAAGTGATGAGACTCTTCAGCTATGCGCGCATGAACTTCCAACACTAATAGAACAACCGCATCTGAAGGATCAGAGAGTGCATTTAGGAGTGGATCGAAGATGTCATTCAAGTATGCCAAGAACTGTTACACAAGAAAAAAATATTAACATAAACCATCCAATAATGAATTTGAACTGTGTGTACCACATGTCCATGTTAGAGGGGGATTCCTTTGGGACTTTCAGGAGAGAGTTTAAATTGAGCTAAATCCTAAGGGTCTGAAGAAAAACCTCCCACAGTCCATAAAAAATTAAATGTGAACAAATTATGCAGGTACAGCTTGTTAAAATATATGTTGTGTAGCCCCAAAAAGCATCATAGTTGAGCACCTCAGCACGATATCGAACTAAGAGAGTGGAAAACCAATGCAATGACTCAATCCGGGTAGCCTCGTGTTCACTATTCAATTCCCTCTTTGCAATTGAGAGAATGGCTCCAATATCAAATCCTTCAGTTGGATCAGCTTTTATAGCACAAAGTTCCTCATTAGTTTCACGCGCAACCACTCTGATCTTCTCCTCTTGATCAGAAATACAGGGCAAGATGGCTCCCAAAATATCTGCATAGTAAGGAACAAGTTGTTCCCCACCAAGCTTGACAAACTCGTTAATCCATGTGATAGACGTCAACCGAGTGAATTCATCAGAAGAACCAGCTCTCCGAACAAGTATTTCAGCCATACGACCATAATCTACATTTGGTGAATTTTTAATTTCCTGCAGAAACTCAGAAAGTGCTGCATCTGCTTGCTGCCTAATCTCATGGCTGGAATCACTCAGCATATTAAATAAACCATCAAGAAAATCAGGAAGGAAACCAAGCATGTCAATATCAGGCACACTGTCTAACACTGTTATCCACCCCACCAAAAATTGTCTCACATAAGGATTCAACACATTCATGCGCTCCCTCAAGAGTGGTATAAATTCTTCTATGCTGAACTGGTCACTCTCAGTTACTATATCCTTGACAAGCCTGTCAAGAAGATGAGCAGCACTCTGCACGTTAGCATCAGAGTCTGCAGAAAGCTTGCATAATGCATCAAAAATTTTGTTGAAGTAGATGATGAAATCCCCTCTTACCACCTTTGCTATGTTGTATAGTGCTTCACACGCATAGTAGCGAACTCTACTGTCTTGGTCCAGGAAGGAGGTAAGCACAGGAGGCACAATTTGCTCCAAATGTTGAGCAGCCTCACTGGTGAGTCCAACCGTGACTGCTGCAAGACCAATCAATCCGCCCTTCCGATGGTTCGCTTGGGGCGACATGGTGAAATCGTTGGTGAGCAGAGCGATCACTGCTGATATCTTGTCATGTTCTCCCGACGTCGCCAGCTGCTTCACGATCCCCTCAATCTCGAGCGCGGCGTTCTTCCGCTTCTCGTAGAGCTTGTCGGAGAGGTTGCGCAGCACGGCGCCCGGGATGATGGAGAGCGCGTCGGCGGCCATCTCCGAACAAACCGCCAAGGAGATCCCCCCTCCCCTGCCGCCGCTACACCCTCCCGATCGCCCGCGATCGCCGCATCGACCGCCCGCCCCCCGCACCCGCACCCCCACCCCCCACCGTCGACGCAACCCTAGCCCCCCGAACAGGCGAAGGCGACGACGAGAGACCACGAGGGGGTGCGCCCCGCCAAACCCTAGAGACCTAAGCCCACCTCCGCTCGCTCGCGGGGCACCCTGGCGAAGCCTATCTCAATGGATTGGAGGTTGGAGACGACGGTGGTGTGATCTGGAGGAGGAGGGGGAGGAGGAGGTGGGGATCCGGGCGCGGCTGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0202400.1 | 3 | 6468787 | T | A |
| Osa03LNT0202400.1 | 3 | 6469174 | A | T |
| Osa03LNT0202400.1 | 3 | 6469441 | G | A |
| Osa03LNT0202400.1 | 3 | 6469910 | A | G |
| Osa03LNT0202400.1 | 3 | 6473482 | C | T |
| Osa03LNT0202400.1 | 3 | 6473611 | A | T |
| Osa03LNT0202400.1 | 3 | 6473828 | T | C |
| Osa03LNT0202400.1 | 3 | 6475320 | A | C |
| Osa03LNT0202400.1 | 3 | 6474285 | A | G |
| Osa03LNT0202400.1 | 3 | 6471379 | T | C |
| Osa03LNT0202400.1 | 3 | 6471552 | G | A |
| Osa03LNT0202400.1 | 3 | 6471580 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0202400.1 | osa-miR5791 | Translation | 5.0 | 11.553 | 1 | 21 |
| Osa03LNT0202400.1 | osa-miR5794 | Translation | 4.5 | 21.846 | 1 | 21 |
| Osa03LNT0202400.1 | osa-miR166g-5p | Cleavage | 4.5 | 13.026 | 1 | 21 |
| Osa03LNT0202400.1 | osa-miR528-3p | Cleavage | 3.0 | 20.939 | 1 | 21 |
| Osa03LNT0202400.1 | osa-miR1435 | Translation | 4.5 | 14.63 | 1 | 20 |
| Osa03LNT0202400.1 | osa-miR1854-3p | Cleavage | 3.5 | 16.534 | 1 | 22 |
| Osa03LNT0202400.1 | osa-miR1861e | Cleavage | 5.0 | 18.771 | 1 | 22 |
| Osa03LNT0202400.1 | osa-miR1861g | Cleavage | 3.5 | 18.771 | 1 | 22 |
| Osa03LNT0202400.1 | osa-miR1861k | Cleavage | 5.0 | 18.771 | 1 | 22 |
| Osa03LNT0202400.1 | osa-miR1861m | Cleavage | 5.0 | 18.771 | 1 | 22 |
| Osa03LNT0202400.1 | osa-miR5144-5p | Translation | 5.0 | 11.388 | 1 | 21 |
| Osa03LNT0202400.1 | osa-miR5490 | Cleavage | 4.0 | 9.444 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0202400.1 | 3 | qTNL-3 | Morphological trait | Culm/leaf | C563 | R518 |
| Osa03LNT0202400.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0202400.1 | 3 | Rhz2 | Others | Others | OSR13 | OSR16 |
| Osa03LNT0202400.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0202400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0202400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0202400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)