© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0203700.2
CGCAGAAATGGTCATAGCACATAGCCCCATATCTCCATAAGATAATTGCCAAGGATAACTTAGAGCAGAGTGATCATCCAGTTGTGCTACAGAGCAGCTACAAAATTTAATATAGCATTCAGTCCTAAGAACTCGACAGCGAGGTCTCAGGCCATGGGCGACAGCCGCGACAGCAACACTGCTGTCGATGAAGCTCTCACTTGAGCGCAGCATACTCCTGGGATTTCTTTCTGTGCTTGCAACCACACGATCCAAAAAATTGAAGTTTCCTCATCTCTTCATGTCTTTTTGTTGTTGTCTATGTACTACAACCCTGCCTCTATTTTGCGGCATTCGGCTGGACCTTGTTGCTCCCAACCTTCTTCATCCCACCATTCTGCTGCTCCTTACTTACAGCAGACTTCTTATCCACCAAGCTACTGCCACCATTCGAGCTCCCATTGCACTCTGGTTTCTGCTCAACCGCGTCGGATTGTTTTGCTGGTGAGCTCTTTGGAGAAACGTCACCGTTGGCCATCTCCCCCATGGTGCTGGTGCTCTTGTTATGCACGTAAGCAGATGAATCTGTTGAAGAGATTGGCTCGGCAGGAGACTGAGAAGCTGTCATCATCTGATGAGGCAGTGCGTGACCCGATCCAGGAGGAAGGAAGACCCCCGTGCCAGGAACTGGGAGTCGTTGTGGAGCAGACCTTGGAGCAGCTTCTGCCATCCAAGCTGTTGTTGAGTTTGGCAAAGGAACAGGTGATGGGAAAGGCATGGCTGCAGCAGCAACTGGAGCAGGTGCTACAAAGAGTGGCTGCATTCCATCTGATGGAGGAATGTGATGCGCTCCAATGGCCGGCGCTGGAAGTACGCCACTGTTTGGGGCATATCCAAAGTGTTTAGGGCTTGAAGAATGACGCGCCATGTTAGCCGGCCTTGGAGGACCCCAGGGCATAGGAGGTGGTGTCAACGGGGTAGTAAACCGTGAAACACTTTCAGATGGTACTTGTTTTCTCGATAAAGACTTCCCGAAGCTTAGTAGGATCCGCTGCTTACATGCAGCAGGAATAGCTCGCTTAGCAACATCAGCACTCTTCCCATGCAACACCAGAAGAGACCCTGTCGAGAGAGAGAGCTTCAGAGGACCTCTATGATCACCTCGTTCTCCTGAAATAACTCGGCCGAACACCATATCACAATCTGTCAGGCAGAATGTACAAAAGGGTCTACCATACCAAGGAGGGGATTGGTGAGGGTGAGAATAATCCCCCTCATTGTAGTAATCAATAACACAATAATCTGGTTTTGTTGGTATAATTTCCTTCTGACACAAGCGGTCAAACAGATCATGCAGCAATCCAGGAACAGCCTCCACTTTTGTCTCTCTTGGATAGTCATCTTCAGGAGGGCCTTCAACGATAGGAATGCCCAGCTGAATAATTTCCCTCCCATGACCCTTCATTGGTCTTTTTCCAATTATTACAGTCTGCCCAGCTGTTTTACCAAAAAAAATCATAGTGAAGTGACAAGATCCCAAAATGTTACATGGTTAATATGACCCTTTTTCTCTAGTTTGTGCTCAGCATCTGTGTCAGTTTGTGTTCAGCGTCATAGTTGACATAGATGCTGAACACAAACTAGAGAAAAAGGGTCAAATTAACCATGTACTAACATAAGTGTCAGACACATATCCAAAAGGAGCCGCAAAAGTAACTGTCAATGATTTTCTAGTTGATCAACTAAGCATAAGAAAAGGCTGTTTCTCAGACAAATAATCTTTGATGGACTCATGGTACACTTTTTTATATACAGATATGGAAACAGATTTTGCAAAACTGGAATCTTAGTGCACAACCACGTGGTGCACAGTGAACACATTAGCACACAAATGAATAGCTGTTCATGGTTATTTCACCCAAAAAAAAGAAGGTAAGTCTACCTTCAAGCCCTCCTCGACGAAAAGAAGCTTTTGTTTCATTAAGTAAAGAGAGAATCTTGTTTTTCTCATTCTCATTTACCAACCCTTCATAAACCTTAAGCCCTTCAACAGCATTAACCTAAAGAAGCATAAAGCATATTTCATCAAATCTTCGAGATTCAAGAGAAGCTAGTTGAAAAGGAGATGCGAATACAGCACTAGAATTTCTGATCTAGGTAAAACAGACCGTCTTGCCATCAATAATGTCATTGACCGTATACTCCACAGGAGTTGGAACCACTTTACTGCTTCCTTCAGCAACAGCTTGCGGCCTAGGAGTTTTTTCACCTTCATGAGAAACAAGAGACTCCAACTGTGAGCTTTTAGCTTCAACCACATTCTCTGCTTCCTTCATTCCTTTCTCTTCCTTGTTATGAACTTCACGTCCATCTTTATCGGATCCAGCCGTCGCACCAGTGCCGCCGCCGCGCACCGAATCGGAGCGATGATGGTGACCACCGTGGCGATGGTGCGAGTGGGACGCCGAGAACGAGGGGCGGCCGCGCGGGGGAGGGGGCGGCGGGGACGGCGAGGCGCCGGGGCCCTGCTGCTGGTGGTGCGGCGGCGCGCGGCGGCGCCACCCGGCCTGCTGGAGCGCGTACGCGACGTCGCCGACGGGGAAGAACTGCTGCATGTGGATCACGGGCGCCCAGTGGTGGCGCCGCTGCTGCACCGCGGCGGCGACGTGCTCGAACTCCCCGGGCTCGCCGACGGAGCGGAGGTGGAGCAGCAGCAGGTCGATGATGGCGTTGGCCGCCGCGAACTCTCCGCGCAGCCATGAAATGAAGCCGTCCCGCTCGTCCACCACCCACCCAGCGCTCTCAACCGCGGCCGCACCTGCGGCGGCGGCGCCGGGCGCGGACGACGGGATGACGGCGGCGGAGGCCATCGCCTTTCCTCACTGAGAGTCTCCGGTCATAGAAAGGCGAACCCCAACCAGCAATGCGAGCGAAGGAGAACGAAACTAGCGAGAGATCTAGGGTTTTGCCGTGTTTTTTCTTCTTCTTCTTCTTCTTTTTCTTCTTTTTCCTTTTTCAAAAGGCAAGCTGTTTTGTCTCTGGTGGTGGGGCGTTGGAACGGAAGAGGAGAGCAGCAGCGCGAGATGTGAAGAGGAGGAGGGAAGAGGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0203700.2 | 3 | 7330319 | A | G |
| Osa03LNT0203700.2 | 3 | 7330368 | G | A |
| Osa03LNT0203700.2 | 3 | 7330860 | A | G |
| Osa03LNT0203700.2 | 3 | 7331295 | T | C |
| Osa03LNT0203700.2 | 3 | 7332504 | A | G |
| Osa03LNT0203700.2 | 3 | 7332756 | T | C |
| Osa03LNT0203700.2 | 3 | 7333410 | A | C |
| Osa03LNT0203700.2 | 3 | 7334943 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0203700.2 | osa-miR5836 | Translation | 4.5 | 18.112 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR6249a | Cleavage | 5.0 | 23.141 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR6249b | Cleavage | 5.0 | 23.141 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR166g-5p | Cleavage | 4.5 | 13.766 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR396f-5p | Translation | 5.0 | 17.981 | 1 | 22 |
| Osa03LNT0203700.2 | osa-miR5487 | Translation | 3.5 | 7.428 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR5492 | Translation | 3.0 | 15.778 | 1 | 21 |
| Osa03LNT0203700.2 | osa-miR5509 | Cleavage | 5.0 | 18.669 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0203700.2 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0203700.2 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Osa03LNT0203700.2 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0203700.2 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0203700.2 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|---|---|---|---|---|---|---|
| Osa03LNT0203700.2 | osa-MIR2866 | 100.0 | 101 | 1 | 101 | 3.15e-48 | 187 |
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)