© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0205000.1
CACATGGCTAAATCATATCAATCTGTCACAACATGATATCTTGCTCCGTGCACAGCACTTATTTAACCATGTCCGCGTGTAGCCTCTTCAACATATCATGTTTGGCTAGTGCTACATGAAAGAGACACCAAACGTACACATCATGAATAAATCTAACGGAATTCAAACAACATTATCAGTTTATTTGTATCGATGATACAGCGGTTGACACCTCCCTTGTTCTTGGGTCACCAGCTTCCAATGAAACACCTCGGGGATCTTCTCGAACAAGAAGAGGGAGAACACCAGCTGAGCTCCAAGCTTTGGCTACAGCATCACTTGCTTCACCCAAAATCACTGAGAAAACTGCATCAAAGCCACCGGCCCCAGGAACTCCAGCTAGTAGAACACCCTCCATATTCATAGTGGCATCCAGAAGTTGAGTTTGTGATTCTGGCTCAATTGGAACACCAGCTGCTATGCCCATCTCTCGCATATGAAGCCTTATTTCAAGGAAAGCATCTCTTGCGGCCAGTAATGATCTAACAATTAGTTCTTGATGTTGATTGGTAGCCACCTCTGTCCACTTACTGCACGTGAGACGACTACAGGATCGTAAAACAGATTCATAGGCTTCCCAGTGATCTTCAGCAAGTTTGTTTAGGTTCCTCAGTTGGTTCTCAAGCACTGAATTAGCAATCCCCAATTTACTCCATGTCTCCTTGGATTTCTGAGGGTCTGACTTCTGCCACTGTTTCACAGATCCAACCATTGATGGAGTGGATGATCCTCCAGTTCCAGGTTCCCCTAGAAGCTAACAAAAAATTCCCTATAGTCAGAAGTAGTACTTATCCTTACAATCAACGAACAGAACACAATCTCCCTAATCAATAAGGCAACAAGCAATCAAATAACACTGCAAAGAATATTGGATAGATTGTTCATATTGCGTTCTCACAAAAAATGTCTGATCTCTGCTGTGCCTTGTAAACAGAAAGGCGTTTCTGGGTAGTGCCCTTAAAGCTTCATCTAAAAGTTCTGCATTTCAAGTCACCTAAATCAAAAGGATAGATATTTTTAAGAGAATGCAAACCTACAAACTACGTTCTGGTTGAGGAATGCATAGTGATCACAAAAACTAGCATGTTCATTTCTTACTGAGAAAAAAACAAGCATGATTTGTAGCATTCGTGCTTATAACAGTATTTTCTCACAAACTGTGATAATAAAAAACAGCCATGAACTGATGGTTAAAAAGGCACAATAGAAGTGCAACTAACCTCTAATCAAGCTGTAAATCTTATAAGGCAATCATCATACCCATAATTTTTCTAATGACTGGTGACAGCCCGTTAAATAGTTTATTGACCATTTAGGAAACCTAGTCATCAATCATAAGTTCTTTTTAACTTACAAGGGACATTAGAGGAGGCAAGGAAAACTTAACCTTCTCATGATCCCAACTCTGTGTAACAATATCTGCCACCACATCTGCCATGCAGTGCCCACCTGTAACCTGAGCCGAGGATAATATTTCTGGAGAAAACCTTGTGTAACGTTGACTCCCATAGACAGCAGCACTAACATCAAACCCACTGCCAATTTTTCCTTGTGCTATACAATGTGCACTTTGAGCAATAGCATGCAGCAAGTCAAGATCTCGTCCAGCTGCGTTGCCACCGGAAGATTGGCCCAAACATGAAAGGTTAACAGTTCCAAGATAGTGAAGAAGAGCTGCAACTACTGATGTGGTCATGGCAGCTGATGACCCAAGTCCAGTTTTGGCAACTTCAGGTTTGCAATTTTCTCCAGTCATTGTTCCATTAGCAACTTCTGAATTAAATGTAATTGAACAGAATGGAGGCAACGAAAGCAATACCTCTGGAGTTAGAGGAAGGCCACGTGCTTCAATCTGTTTTCTATAAGAATAGAAATCATTGCAGCCCAAAATTGTAATGTGCAAACCTTGCAAAAGCAACTTGTCCAGTGCCTCCTTCCCCTCTTTGTCAGTGACAGTCACTTTAGCAGCTGCTACCGAGAATTGCACTGCCTGCTCCACAAAAGGGTTTGCAGATTCCCTTGAAGACGTCAACTGGAGCGTTGATTTCTTCAGGGAGAGCTTGTAGGTGGCCTCCCGGGAGAGCTGAGGAGAGGTCACTTTCACATCCGTCCACGCCCATGCCCAGGAGTCGTGGCTGAGCTCGTCGCGGAGCGGGCGGACGATGGCGTAGAAGCGCGCGCTGGTGCTGAGGACGAGGCCGGCGTTGGGCCGCTCCAGCACGAGGTAGCCTCCCGCGACGAGCACCTTCCCCGGCGCCGACGCCACCACTTCCATGCTCAGCTGGGGGGACGCGATCCGGAGCTGCGGGAAGGCCGGGTGGCGCGCGGCGGAGAGCAGCACGACGACGCGCGCCGCCGCCTTCCGAGGTCGCTGACGGAGGCGGAGGAACCGAGGAGGATCGCGAGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0205000.1 | 3 | 8068539 | G | A |
| Osa03LNT0205000.1 | 3 | 8068666 | C | T |
| Osa03LNT0205000.1 | 3 | 8069083 | A | G |
| Osa03LNT0205000.1 | 3 | 8069746 | G | A |
| Osa03LNT0205000.1 | 3 | 8070229 | G | A |
| Osa03LNT0205000.1 | 3 | 8071076 | G | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0205000.1 | osa-miR812r | Translation | 4.5 | 16.652 | 1 | 24 |
| Osa03LNT0205000.1 | osa-miR6255 | Translation | 3.5 | 14.205 | 1 | 22 |
| Osa03LNT0205000.1 | osa-miR6256 | Cleavage | 5.0 | 18.021 | 1 | 22 |
| Osa03LNT0205000.1 | osa-miR319a-5p | Translation | 5.0 | 17.256 | 1 | 21 |
| Osa03LNT0205000.1 | osa-miR444a-5p | Cleavage | 5.0 | 12.349 | 1 | 21 |
| Osa03LNT0205000.1 | osa-miR169r-5p | Translation | 4.5 | 17.904 | 1 | 21 |
| Osa03LNT0205000.1 | osa-miR2871a-3p | Cleavage | 5.0 | 16.644 | 1 | 21 |
| Osa03LNT0205000.1 | osa-miR2871b | Cleavage | 5.0 | 16.644 | 1 | 21 |
| Osa03LNT0205000.1 | osa-miR5151 | Cleavage | 5.0 | 15.3 | 1 | 22 |
| Osa03LNT0205000.1 | osa-miR5152-5p | Cleavage | 5.0 | 6.625 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0205000.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0205000.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0205000.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0205000.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0205000.1 | 3 | Gy3a | Others | Others | RG266 | C63 |
| Osa03LNT0205000.1 | 3 | qTAA3-1 | Morphological trait | Shoot/Seedling | C316 | C63 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)