>Osa03LNT0205400.1

CAAAAATGTTGTATCGATGCATGCTTTTCAACTTCATATTTGCATATTTCACTCCGAAAAACATTGTGAGACGGACACAAAGGTTTCGAATATGTGATGAGTTCCATCAAACGCTCATATGCAAATTGACTATACTGCTTTTTGGAAAAAGAGGGGTTTTGTAGTGGGAAGTGGTTCGAGAGGAGCTCAACCAGAGGCGTCCTTATTCAGCTTTTGCCTAGTGGAATTCAGATTAAGAATTAAGCCAATTCACCATCTTTGGTCTGGAGGACTAGAACAAAGCACAGACACAAGTGCACAAATTGCAGTAGAGGTGCCAATAATTGGACGGAATCGAGGACACTGTTGCCATACTGCATAGGTCTGCGAGGTGATGGATGGGATGGGAGATTTAACCTGAAACTGTGGATGCTCAAATTTATGCACCTTTGATGTGGCAGGAAGCAGGATCAACAATTTTGTGGATGTACT

Explanation	CPC Score
noncoding	-1.15084

Transcript ID	Chromosome	Locus	Ref	Alt
Osa03LNT0205400.1	3	8187417	T	C
Osa03LNT0205400.1	3	8187306	T	C
Osa03LNT0205400.1	3	8187354	C	A
Osa03LNT0205400.1	3	8187491	A	C

Transcript ID	Transposon ID	Chromosome	Strand	Start	End	Counts

Transcript ID	MiRNA ID	Inhibition	Expectation	Score	Binding Start	Binding End
Osa03LNT0205400.1	osa-miR395o	Cleavage	5.0	18.849	1	21
Osa03LNT0205400.1	osa-miR1859	Translation	5.0	15.529	1	22
Osa03LNT0205400.1	osa-miR2091-3p	Cleavage	4.5	17.373	1	22

Transcript ID	Chr	QTL Gene	Character Major	Character Minor	Marker Interval1	Marker Interval2
Osa03LNT0205400.1	3	Gy3a	Others	Others	RG266	C63
Osa03LNT0205400.1	3	qTAA3-1	Morphological trait	Shoot/Seedling	C316	C63
Osa03LNT0205400.1	3	S34(t)	Physiological trait	Sterility	nan	nan
Osa03LNT0205400.1	3	qGW3	Morphological trait	Seed	C706	C12534S
Osa03LNT0205400.1	3	qOE3-1	Physiological trait	Eating quality	nan	nan
Osa03LNT0205400.1	3	qTA3	Physiological trait	Eating quality	nan	nan

Transcript ID	Pre-miRNA	Identity(%)	Alignment Length	Pre-miRNA start	Pre-miRNA end	E-value	Bitscore

Transcript ID	Chromosome	Locus	Trait	Value	Plus Minus