© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa01LNT0018000.1
TCCATCCACTCCTCAAGAAATCCCTAGCGACAGAAAGGATTAGAATGTAACCTCAATTATGCAGTGTACATTCCAAGTTTCATCAACTGTTGCAAGACACCAGTGCAGATCTTTAACTAACAGAAAAAACAAAACATATGAAGGACTGTAATCTTGACTATACCTAGCAAGGTTGGATTGACATTTCAATCCTCCCTGACCTAAGCACATAAAGATAAAGATCATAGCAGATTCTTCTGGGCAAGCAGAACCCCCACTGCTGTACATACCACAACGGAGAAAAGACCATCCCGAGACCTCAACCGCTCCTTCCATGTCAGGGGTTCAGAGACGTTCCTCAACACTTCCTGAAACTTTTCTTTGGTTTCATCCAGCGTGCCAGAATTGTCGATCACAATGTCTGCTTGTGACTTCTTCCAGTCCAACGCAAGCTGCGCATTGATCCTATTCCGAGCTTGTTCTTCAGAGCACCCATCTCTTGACATTAGCCTCTCAATCTGGGTTGCTTCATTCACCCACACAACAATAACAGGGTGCGTCCATTGGTCCATCTTTGTCTCAAACAACAGAGGAATGTCGAGGACGATAACCTTGCATCCTTTTATCCACAGTTTTAGTATCTCCCAAAATATCCCAGATGAAATATGTGGAGCCAGGAGACTGAAAGTAATCAGTAAGATTAGAAAACTAGCTCTAAATAACTATCTATCAGCAAACGATGAATGAATGCAATCTAAATCTAAATACAAAAGGAAGTACCAGGTATGAGTGTGTGATCCAACCAACAGAAAATAATGAAGGATAACCAGTAATGGACTCAAATAATATGTGTTCACTAACACTAAAGAAAGATAAATAATACAAATGAAAGTAAGAAATAGCCCAATGAATTAGCCAAAAGTCAAGTTCATAAATATAGTAGATTCATTAGAACCGAAAATCATATGAAAGTGAAATATTTCAGTTGACGAGATGTACCGGTTTAGAACTTGGCGTTTTTCCGGGTCAGAAAAGACAATCTGTCCTAAGCGAGCTCGGTCAATTTCTCCATTTTCTAACAGAACATCATTTCCAAAAGCTTCTACAATCTTCTTCCAACCTCCAGTGCCTTTCTGTACCACATTCCGAGCAACAATGTCGGCATCAACAACAGGAATGCCGCTAGCCTTGAACAGGTTGGAGATGGTGCTCTTTCCAGACGCAATCCCACCAGTCAATCCAACCAGCCTCATCCTTTTATTTCACTCCAGGATCCCCTCCCCTCCGCTGCGATGGAGATCGCCGCCCGGCCCTCCCCTGTTCAGCCGCGACTCGTCTTGGCGGCGGCGCAAGGAGGCAAGGAGCGGAGGAGACAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa01LNT0018000.1 | 1 | 14679386 | C | G |
| Osa01LNT0018000.1 | 1 | 14679461 | C | T |
| Osa01LNT0018000.1 | 1 | 14680456 | A | G |
| Osa01LNT0018000.1 | 1 | 14682252 | A | C |
| Osa01LNT0018000.1 | 1 | 14682651 | T | C |
| Osa01LNT0018000.1 | 1 | 14683165 | C | T |
| Osa01LNT0018000.1 | 1 | 14683213 | T | C |
| Osa01LNT0018000.1 | 1 | 14680913 | T | C |
| Osa01LNT0018000.1 | 1 | 14681131 | G | T |
| Osa01LNT0018000.1 | 1 | 14681195 | T | C |
| Osa01LNT0018000.1 | 1 | 14681263 | C | T |
| Osa01LNT0018000.1 | 1 | 14680652 | T | C |
| Osa01LNT0018000.1 | 1 | 14681201 | T | G |
| Osa01LNT0018000.1 | 1 | 14682222 | A | T |
| Osa01LNT0018000.1 | 1 | 14683259 | A | G |
| Osa01LNT0018000.1 | 1 | 14683368 | C | G |
| Transcript ID | Transposon ID | Chromosome | Strand | Start | End | Counts |
|---|---|---|---|---|---|---|
| Osa01LNT0018000.1 | DTM_#DNAt_MULE_japo_Os0205 | Chr1 | - | 14681094 | 14682246 | 1152 |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa01LNT0018000.1 | osa-miR319a-3p.2-3p | Translation | 5.0 | 13.174 | 1 | 20 |
| Osa01LNT0018000.1 | osa-miR319b | Translation | 5.0 | 13.174 | 1 | 20 |
| Osa01LNT0018000.1 | osa-miR1850.1 | Translation | 3.5 | 11.774 | 1 | 21 |
| Osa01LNT0018000.1 | osa-miR5501 | Translation | 5.0 | 16.37 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa01LNT0018000.1 | 1 | brt1d | Resistance or Tolerance | Drought tolerance | C742 | C904 |
| Osa01LNT0018000.1 | 1 | rfw1b | Resistance or Tolerance | Drought tolerance | C813 | C955 |
| Osa01LNT0018000.1 | 1 | nan | Morphological trait | Root | RM23 | RM306 |
| Osa01LNT0018000.1 | 1 | nan | Physiological trait | Source activity | RG532 | RM472 |
| Osa01LNT0018000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | R886 |
| Osa01LNT0018000.1 | 1 | nan | Resistance or Tolerance | Salinity tolerance | RM1 | RM5 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)