© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0206400.1
GAGAAGAAAAAACGGAGAAAACCTCTATTTCTTAAAATCCCTTTCTCAACTCATTTTACTCACGTCCATGCTCACCACAAAGAAATGAATTCGCAGTCAAACATCACTAAAATAGGTAATGCTCCGCAAGTTCATCCACTACACCTACGGAAAAAAAAAATGTGGTGCCCAAATGCCCAATAATACAAACTGTTCCCCTCCCGTTTCTTTGGCTGTCCTGTTCCATGCTCTTTGCCGAGCCAGAACAAAACACAATTGAGCAAGCCAACCATGGAAAGCTCAGCACATTAAGGCAGGTCAAGATGGAACCTGCACCTCATGTACCTACGCTGTAAGTCAGCTTGTGCTTGCGGTGGTTCTCCAATTTTCCCCTGCATAAACACCGTCACTTCCAAGTTCTTCCTCTATTCTAAGCAGCTGATTGTATTTACTGAGACATTCTCCACGGCAAGGAGCACCCGCTTTGATCTGTCCAGCAGCAGCACCAACAGCCAAGTCAGCAATGAAAGAATCATCAGTGTCCCCGGACCTATGTGACACCATTACGCCCCAATGAGCATCCTTTGCCTGTCTCACAACCTCTATGGCTTCCGTGACAGTGCCTACTTGATTAGCCTTGAGAACAAGAGCATTGCAGGTATACTCATTTACTGCCCGCTTAATGCGTTCGGGATCTGACATCAATAAGTCATCACCTACAACCTGGCACAGCTCTAGGGTGGTAAACTTCTTCGAATGCTCCCAGTCATCTTTATCAAAGGGCTGTTCGATTGAGACAAGTGGGTACTCTGAACAAAGCTGGCTATAAATCTCAATCAAATCATCTGCAGTTTTGAAGCCCTGCCCTGATTTCTCTGCAAACTTGAACTCCATGTCATACTTATTTCCCATGCAAAAATCGGTAGCGGCGACATCAATTGCTAGCTTGATCCTTCCATTATATCCAGCTCTATTTATTGCCTCAATGACAAGATCCAAGCCTTCGGTTATGCTGGAAATATTTGGAGCAAATCCACCATCATCACCTATGTTGCAGCTGTTTGAACCATATTTCTCCAAGATGATATCCTTCAGATGATGATATGTCTCAGAACCCATCTGCATTGCTTCTTCAAAGTTTTTGGCACCAACAGGAAGGATCATAATTTCTTGAATAGGGAGACTGTTTCCAGCATGTGTTCCTCCATTAATGACTGTAATTGCAGGGATGGGAAGTGTCGTAGCGCTTTTCCCAACAAGTTCTGCTATATGCTTGTACAATGGAACCTCTTTTTCAGCAGCACCTGCTTTACAAGCTGCAATTGATACAGCCAACATAGAATTCACTCCAATCTCAGCCTTGTGATGCGCCTTGTCCAAGTCCATGATGGCCTGGTCGATCTGCGACTGCTGCTGCGGATCCATTCCCACAAGCGCCTCCGACACCTTGTCGTTGATCACCCGCACCGCATCGGCGACCGCCCTGGCGAGCAGCTTCCGCTTCTCGGCGTCCCTGACGGCGTCGGCGGCGGCGCCCTCGGGGGCGTCCGCGGCGGCCGCGGAGGCGCGGTGCACGGCCTTGTTGGTGTGGAGGCTGACCTCCACGGCGGGCTCCCCGCGGCCGTCGAGGATCTGGCGCGCCCGCACGCTCGTGATCACGGCCGGCGCCGCCCGGCGCATGTGGTTGGAGATGAAGAGCACCGGGTCGGGGGCCTTGGCGCGGACCGCCGCGTTCACGGCCTCCTCGATCTTGCGCGACAGCAGGTGCTTCTCCAGGTACTCCTGCACCGACATGGCTGAGGCTGCGGCGGTGGCGGCGGCGTCCCGCGCTGCTCCTCCTCTCGCCACGCTTCCCCCCTCTCTCTGGCTCTCTCCTCCCGCGCCCTCTGCCTCTGCTCGTCGGCTCGTCGCCTCCAGCTGCCGGGATCGCTAGGCCGTGGACATTGGCCGAACTCGAGGAAGGGGAGGCTCGAGACGAGAAGTCGAGAGTCCTCGGACCAGTGCGTGCGTTTGGGTAGGCGTGGGCCAGTTTCACGATGGGCCGGAGCCCATTTGTGTAAGCTTGTACCATGGGCTGAGTACACACTGTGTCTATGGGCCACTGACTAGGAGAAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0206400.1 | 3 | 8800573 | C | T |
| Osa03LNT0206400.1 | 3 | 8800628 | A | C |
| Osa03LNT0206400.1 | 3 | 8802951 | A | G |
| Osa03LNT0206400.1 | 3 | 8803053 | A | C |
| Osa03LNT0206400.1 | 3 | 8803255 | A | G |
| Osa03LNT0206400.1 | 3 | 8803266 | A | G |
| Osa03LNT0206400.1 | 3 | 8803996 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0206400.1 | osa-miR5816 | Cleavage | 3.5 | 21.788 | 1 | 24 |
| Osa03LNT0206400.1 | osa-miR5837.2 | Cleavage | 4.5 | 16.94 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR6254 | Translation | 5.0 | 16.885 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR6256 | Translation | 5.0 | 14.822 | 1 | 22 |
| Osa03LNT0206400.1 | osa-miR164a | Cleavage | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164a | Translation | 5.0 | 20.718 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164b | Cleavage | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164b | Translation | 5.0 | 20.718 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR160f-3p | Cleavage | 4.5 | 10.312 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164c | Cleavage | 4.0 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164d | Cleavage | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164d | Translation | 5.0 | 20.718 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164e | Cleavage | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164e | Translation | 5.0 | 20.718 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164f | Cleavage | 3.5 | 13.413 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR164f | Translation | 5.0 | 20.718 | 1 | 21 |
| Osa03LNT0206400.1 | osa-miR1870-3p | Cleavage | 5.0 | 17.752 | 1 | 24 |
| Osa03LNT0206400.1 | osa-miR2098-3p | Translation | 4.5 | 16.419 | 1 | 20 |
| Osa03LNT0206400.1 | osa-miR2931 | Cleavage | 4.0 | 12.578 | 1 | 20 |
| Osa03LNT0206400.1 | osa-miR5076 | Translation | 4.0 | 9.541 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0206400.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Osa03LNT0206400.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0206400.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0206400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0206400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)