© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0207800.1
GCAGCCAGCAGAAAAGTATGTACTATTTGACTTGAAAATAATGTCTCGCAATGAATAGTTGAACCCTCACTGATGTCAGCTCGATGTAGTAGTAGAGTAAAGATTTAGCATTCATGATCCGATAGAAACGTCAGATGGTTTGCTCCTCCTTAGACTCGACAAAGTGTCCAAGTGGATCTCTGCAAGGGAACTGGAGGTCACAAATAACCATCGCATCTAAGTTGTTACCGATTGCCATATTAAAATTAAATGCGTGGTCCACTCCATAGCACAAATTTCATCTGGAGTCAGGCACAGAAAATAATCATATGGGTTTTATTTATTGAGCACTCCAATGTGGGGATCGATGAGCTGCTTTCAGCTATGGAATGAATTGCGTAGCTCTCCAGCTGTCAAAGCAGATGCCATGTTGGATATGTAGGTGGTTCTTAGTTATCTGTCTTCGTCTTGGCCTGCCTGATCTTCCTGTCCAGATTGTCGCACGAATTGCCCGCGGATCCGAGGGCGCTGCTCAGCCAACCTCTTTCTGCTCTGATAGCGCACCTTTTTTCCAAAGTTCCTCACTTTCCGTTTCTGTCTGAATTTGTTCAATGCAGCTTCTCGGTAACAGACCCCATTCTGATACAAGTCATTACCACTACCGCTCCCACTTCCATTGCCACCTCCAGCCCCATTTTCATCCACGATACCATTAACAGTCTCCATGTTTGGCCTCCCAACATTGGGAGCAGTACTAGGTCCTCTTTGCCCATTGTTTCCATTATGGCCACCTGAAAAGCTCCCGTTCACACTATAGTTTGCCGCATGACCTTCAATGGGAGGATCAAATACATTGGATGAACCACACTGAGCATCTGATGATCCTCGCTCAATGGATGGCTGCTGCTGCTGCTGTGTCATAACATGGACGTAGTAATGAACATGATGATGGTGCTGCATAAAGCTATTTTGTACATCTACAGGGTGGCCCACATTAACTCCATTAGCAATTCCTTCATCAACTTTGTCTTTCCCTACAACATTAGCAGGTGACGTTTGACGCTGCACAGGATGGAATGCTGATGTATGTTGGGTAGCTTTGACAGCTGATGGTGATATCACTTTTCCCCTGTTTGAAGAAGGTTTTGTGATGGCATTCTTAGTACTGGAGCCCATGTCATTGTTGTTGCTACTACCATTGGAGCCTTGCTTTATTTCAGCAGCATCTGAATTTGACTTCACCTTGCAGTTGGAGTCTGTTTTCAGAGCCTCTGAACTGTTATCTTGAGGTGAACAGCTTCCCCCAAATCCAGCTCCACCTTGATTAGAAGCCACAGTTGTATGGTACCTGGTGAAAGCTGAGAGATCTGATCTTTTCAGAATATTTCGTTCATCATGGATTTCAGTTGCAGATCCAGTTGTTTTCAATCTCTTCAAACCCAACTCTTCAGATGTCATATCAATGAGAGAATCACGATTTTTATCATTTCCATCTGGAACCTTGGAGGAGCAATCAGGAGCATTATTGATTCTAACTACTTGTTTGTCATCTGTGCTTCTGGCTATTGAACTAATTAAATCAACAGTTTGAGTAGTTGGTTCATTCTGTGTGTTCCTACTATCTGTTTCTCTTGTTGTTTTACTTTGGGGCATGAGAGTTTCATGCTGTTTTTCTGTTGGATTAACGGACATCTCTCTTGGAGAAGATTGGTACTCCATACTAGAATTTCTAGGAGCTCCTATTTCTAAGTACTTCCCCATGGAGTCATCGTTATTTTCTTTATGTTTCTTTCCGCTCCTTTTATTTGCAGTCGGTAACCACCTGTTGCTGCATATCTCTGATGTGGGGTGAATTACTTGCGCACAAGTACTATCTGGTAGATCGGATGGTTGATCAGGAGACATTTGTTGTGGGCTGTCAATCTCCACTGCACGCTTTGTCCATGAACTTTGAGTGCCACTGCCATTATCACTGCCATCCCTAGCGTTGTGTCCAACACTTAAGTCGTCATCATCTTCATCATTGTCATCATCATCCTCGTTGTCATTATTGCTACCGCTGTTATTCTCATATTCATCATCAACCTTTGGTTTGGTACACTTTTGTGTTCGGATGCCACTTTCGCTTCCACTGCCACTGGAACTGTGGCATCGTCTCCAAACATGCTGCCAAAGGTTCTTAAGTTCATTCTTACGTATAGGCTTCACTAGAAAGTCAACTGCTCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0207800.1 | 3 | 9759794 | T | C |
| Osa03LNT0207800.1 | 3 | 9759825 | T | C |
| Osa03LNT0207800.1 | 3 | 9760847 | A | G |
| Osa03LNT0207800.1 | 3 | 9762449 | T | C |
| Osa03LNT0207800.1 | 3 | 9763513 | T | C |
| Osa03LNT0207800.1 | 3 | 9763613 | T | C |
| Osa03LNT0207800.1 | 3 | 9760877 | C | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0207800.1 | osa-miR5528 | Cleavage | 4.5 | 21.628 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR5806 | Cleavage | 5.0 | 15.724 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR818f | Translation | 5.0 | 14.168 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR818f | Cleavage | 4.5 | 17.741 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR167h-3p | Cleavage | 4.5 | 23.264 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR172d-5p | Cleavage | 5.0 | 19.206 | 1 | 20 |
| Osa03LNT0207800.1 | osa-miR528-5p | Translation | 5.0 | 16.414 | 1 | 21 |
| Osa03LNT0207800.1 | osa-miR1857-3p | Cleavage | 5.0 | 17.178 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0207800.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0207800.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0207800.1 | 3 | S34(t) | Physiological trait | Sterility | nan | nan |
| Osa03LNT0207800.1 | 3 | qGW3 | Morphological trait | Seed | C706 | C12534S |
| Osa03LNT0207800.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207800.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0207800.1 | 3 | gl3a | Morphological trait | Panicle/flower | C63 | RM232 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)