© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0208200.1
CTGAACTCTGGGTCGTGTAAGCTACTCATTTAGAACATACATTTGCAGTTTTGCATACTATCATCCAAGCAGTCAATTACTAATAGGAAGAAATCTGGCGTTACAGATTAACTTCAGTTTACAGGATCAGAAGGCCAACTGCCGTTCATTACCTATTGAGAATGATTACCAACCATGTATCCATGGCTCATCACAAGATCTACTGAGAATGTGTACTGAAAAAAAAAAGGAACTTGGGGCTGCTTAATTTGAGGTGTTAGTCTACAGGGCAAGTTGGCTCTTATAGATGTACTACTTGCTGAGGTTCTTTTTTCCGTTGAGTTCTGAGAAGGATTACAAATTTAGGGGTGGGGGTGGTTCATGTTAGTGTCATTGGTATAAACAAAGAATTATATGAGACCACACAAACGAGGCTTAGAGCAAAACTGCTTCCCATTTGCTTTCACCAAGGCTACCACTCCAGCCGTCAAACCCGCACAGATAATGGAGGTGATGAAGTGTTGTGCATTCCGTCCAACTTGACTAAGAGTGAATGTGGTGGCAGTAATCCCACCAACTATGATTGCTGAAGCCACAGGAAGATACGTTGCAGATTCAAATCCACCATTTTGAAAAGGAGAAGAGATGCCTTTGCTGACTGTATAGTAACCGCTGATAAGGTCTAGAGCATCTTGTCTCACTCCGTCATGAAAATTATTCAAATAATATCGTGAAAGAGCACTCATGCCATCTTTAATCAATCCAGGTAATGTCTGCCTTCCATACCTCACTAGGTCCCCCTTTAGTGCATAAGAACCAGCATATTCCAGGCTTAGCTCATCTCCATGTTCAACCCACATTTTTTTAAAGGTGTCACTAATGTCTCCAGATTGGGAAATGCTGCCAGATGATGATAGAGCCCCCATGCGCTGCAGCTGTAAGTCCAACGATTTTCTAGCAAGGAAGCTCTGAGTTACATTTGTACGGTCCAGACAATCTATGCAATTGGATCTAACTATGCCGCTTTGCTCCAGGAATATCTCTCCTTTGGAGTTGATAAGAAAATATCTGCTCAGCTGGCCCCGAAATTAATCAAGAGCAAATTACTTGCCATAGTTAAACCCTTGTTTCTGAATAGCTTCTTCAATTTGATTGTATAGAACTTGCAGATTATCAAAGTTCCCTCCACGACAGATATGATGGAAATCAAAATGCACATACCTGATGTTAGGAATCCTCTCCATTTCAGCAGCAAATGCATTGCTTAAATTTCCTTCATCTCCTTGCTTATCTGTCAAATCAACAACAACTGTGTCCCCATATCTTTGTGAAAGATCATGAAAGTGGCGTTGGACAACCTTCGGCGTTTCCTCATGTTCAATTATGTTGAGACATGGTTTGTAGCTTAAATCCACTATTTGCTCCCAGAGAAGTGGAATGGAGCCTCGAACCTGTATAAATGAAGACATCAAACCTTCATACTCTGCCAGCTGTTCTGTCTCAACAAAATTAGCTGTGGCTCCTTCAAGATTTGCACCTCTCCTCCACATTCTTGTTCCTAGACGCCTGTTGCATCTACGTGAGAACAACGTTATTCTGACAGGTGCCTCCTTTAAGGAAAATTGCGCTGTCTGAAAACGTTAAATAGTCAAGGATATAGCAAATTGCTAAAGCATGTTTCTCTGCTGATGATTGAAAAACAATGAGCACTGTATCACACATTTTCAACAACTAAACACAGATAATCCGTATATCCTATACTGTCCTCCTGGGTACCAAAAGTCCAAAACAGAGAAACCGATGTTACATGTAAAAGGTAAATGCTCAATACACACCAGTGAAAAGTAGAGATAAGAATAAAAAAATAAGCAGTGAAAATATCTGAGATTTTGGATATTTCCTTGGACCAGTGGGATGATAAATTCATCAAGTTTTGCTTCAATAAACTCCTCTAGCAAATTTTTGTTCCAAACGAAACGTGGGTCAGCCTGTTTCCAGAGTGGCTTATGTACCCGCCCAGCAGGCAACTTTGATGCCCTCTGCAAGTTCAGTGTCAAATCCCTGTCATAAGAGTAATAAAGCCCATGAGTAGTTTCTGCGATTTTCAGGAGAGACATGAAATATGCCTCATCCCTTTTTTCTTGTGCAGTTAAATGCTTTATAGCCTCGTTGCAGCATAAGAATTTCATCGAGTTCACATTGTAAACAGGGGATCCCTGATATGAACCAGCGTCCCTTTGAGAAGTGATGACAAGTACATAGCTTCCGGCGAGCAACCTGATCACGCCAGCCACTCCGTAAATCTTCGACACCCTACAATCGCTTCCCGCAGCCGCTTCCTCTGCGGAGAGGGGGCGGAGGGAGCCGTTGGAGCGGGAGACGGCGAAGGCGCCGCCGCCGTCGACCGAGCGGATCACGTAGCGGTCGCGGAACTCCCGCAGCTCGAGCTCGCGGCTGCAGGCGCCGGGGCGGAGGGGCTCCTCGGCGAGCAGCGGCGCCTCGTCGGCGGCATCCGTCGCCATCGGCGGCGAGGCGCGTGGCGTGTGTGTGTGCGCGCTCGGTTTACGTTTGGATCGGTGGCCCGGCCCCCCGGATCCGTGACGGGAGAAGGAAAAGGGGAACGAGAAA
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0208200.1 | 3 | 10091045 | T | C |
| Osa03LNT0208200.1 | 3 | 10091857 | T | A |
| Osa03LNT0208200.1 | 3 | 10091990 | C | A |
| Osa03LNT0208200.1 | 3 | 10093447 | A | G |
| Osa03LNT0208200.1 | 3 | 10094188 | C | A |
| Osa03LNT0208200.1 | 3 | 10095656 | T | C |
| Osa03LNT0208200.1 | 3 | 10096171 | A | G |
| Osa03LNT0208200.1 | 3 | 10096976 | C | G |
| Osa03LNT0208200.1 | 3 | 10096893 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0208200.1 | osa-miR169i-5p.2 | Cleavage | 5.0 | 11.027 | 1 | 22 |
| Osa03LNT0208200.1 | osa-miR815a | Translation | 3.5 | 16.528 | 1 | 21 |
| Osa03LNT0208200.1 | osa-miR815b | Translation | 3.5 | 16.528 | 1 | 21 |
| Osa03LNT0208200.1 | osa-miR815c | Translation | 3.5 | 16.528 | 1 | 21 |
| Osa03LNT0208200.1 | osa-miR444d.3 | Cleavage | 5.0 | 14.502 | 1 | 21 |
| Osa03LNT0208200.1 | osa-miR5156 | Cleavage | 4.5 | 7.6 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0208200.1 | 3 | qBM-3 | Physiological trait | Source activity | RG369 | RG745 |
| Osa03LNT0208200.1 | 3 | qGY-3 | Morphological trait | Seed | RG369 | RG745 |
| Osa03LNT0208200.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208200.1 | 3 | nan | Morphological trait | Seed | RM251 | RM554 |
| Osa03LNT0208200.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0208200.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208200.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0208200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0208200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)