© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0212100.1
GGAATACCAAAAATTTTCAGTTTCTGTAGAATAAATATGGTCAGTACACCCCACATGGTCAGGAAGGCCTCTTGTGTGTATAACACTATAACTGGGGAACAAGAGCTTCTGCTGCCCCTGAAAAATTGACAGGGGAGGAAGAAAAACTGGTAGTGACACGAGCACACTACCAAGAACTGAACAGAGGTTCCATATCTCTGTTGAATTCAGTGCATCCATCGTATACATCCTCACAATCTTAGCGAGATAACTGTGTGAGCAGAATCAAAACAGGAAGACTCCTCTTTCCAAGAAATACAGATCTCAAGCTGCTTGATGGCATTAATGGAGAATTACTTCTGGTTCACCAAATCAGCACCACTGACATACCTAGCAACGAATGAAATCAACCGGAATGGAGCACCGACGATTGGAGCATCAGAAAATGGAACCTCCTCTGCCTCATCATCGGCTACCGGTGGTTGTGGGTCTTCCTCATGAATCTGTATATCATCTAATGCAACTGGCAGAATTTCTTCGCTTGTTCTTGGTTCATCAAAATCTTGCTTTGACCTTTGATGTGCATTCATGTCAATGAGGCCCTCGGAAGAAACATCATTGATTGTTGTTTCTGGAAGTTGCATTGGAGCTTCTTCTAGATGATTACTAACATAGGCGTTGCTAGGACTGCTGTTGATTGGACTATAGTTATCCACAGAAGTAATTGCTGCAGAACTGTTTACACTTCTATCAACAATCAGTTCATTACCCTGCAAGCAGAAAACAATTACGCTGTATACAAGTATATATGAATTCTGGCGGTTTCCAGACATTTGATATTCTGTCACACTGCATGCGGAGACTCGTACTTCTTACCAAAACCAACAGTCTGCTCATTGAGAACTGTGCTGGTCAAATCCGTTTAATCCATCACATTATTTTCAAAGACCTCAATTATCATGTCTCTATCTTATGCACTAGAATCTGGAAGGACAAGTGTTTTATGCACAAGAGAGAAGAGACTACTGATATCAAGTGGTATTTCTCCCCAGGCAGATCCACTGGAGTGTATAGCGTCTACCAAATTGGACACAGGTGACAAAAAGGAATGTTCTGCATAACATTTACCTTTTTAGTCACGGAGGCTTCAGTAAGAGCAGACTTTGCTTCAAAGACTCCTAATCTTGATGCCAGTTCATCAAAACCTTTTACCAACCTCTGGCTTTCCTCAACAGTATTGTTTGAAGCTTCCTCCAGCACCTTCACCTGTACAAGCAGTACTTTATTTGTCTCCTCCAGTCCACTTAATCTCTCTTTAAGAGACGTCTCCTGATGAGTTAAGGCATCATTGATGACCTCTATGGACCTGACTTTGTTATCCAAAGCTACCTCCTTCTTAATCAGCACATCATACCCATTCTGTAAATTATTGAGCTTTTCCTCCAAACGGACCTCATTCTGTGCATGATAATCCACTTTGTTATGCAACTTTTCAACCTCAATCTCCATGGAGCTCATTTTTTGATGCCACAAACTCTTCTCATCTTCCAACTTCTTTATCGTATCATGTAATTTATCAAGCTTTGCTTCATATAGTCTGTGCATGTCAAGCTCCACGGTGGAATCTGACATCTCAACACTCCTCTGATCAGCATGGGCTGTACTACTGACTTTGTGATTTTCATGTGTCATGGCAGGGTCAAGGTTCTGAAATGGAATCCCCTCTCCAACAGAGGACATGACATCATCAGTGTTTGTGCTATCATGATTTGCCTGTCGATCTGGCTCATGATTCTGGTACTGAGGAGCTTCCTCTCCAACAGTGGACATTGCATCATCAGCATCAGTGCCATTATGATGGTCATTAGGGGCTGTCTCATGATTGTGGGACCGAATGGCAGCCTCTGCAGTGCTGGACGTTACATCACCAGTGTTCTTCCCTTGGTTCCCCTTCTTCTTCTTGTTCCTCTTCTTTTTAGCATCCATCTCCGGTTGCAAACCCAAGCCCTTACAATACTTTATCTACCTACGAGAAATGCCGGCGGAGCGAGAGCTAACCCTAGAACAGCCGCAGGCCGCAGCCTCCGCCACGAATCTGGGAGGCTGGGGATTTGTTGGGTGGAGGAGGGGGGGGAAAGCTCTCACGAGAAGACTTTTTGGGGGAAGCGAGGCGAGCGCGGGGTGGAGATCTGCGTCTCTTGGGAAGGAGGAGCGCGGAGGCGTAACTGCCGGTGGCTTTGTCGC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0212100.1 | 3 | 12291961 | C | A |
| Osa03LNT0212100.1 | 3 | 12293580 | C | T |
| Osa03LNT0212100.1 | 3 | 12293842 | T | C |
| Osa03LNT0212100.1 | 3 | 12295737 | T | G |
| Osa03LNT0212100.1 | 3 | 12295901 | A | C |
| Osa03LNT0212100.1 | 3 | 12296682 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0212100.1 | osa-miR5788 | Translation | 4.5 | 24.446 | 1 | 21 |
| Osa03LNT0212100.1 | osa-miR7693-3p | Translation | 4.0 | 23.105 | 1 | 22 |
| Osa03LNT0212100.1 | osa-miR396a-3p | Translation | 4.0 | 23.814 | 1 | 20 |
| Osa03LNT0212100.1 | osa-miR396b-3p | Translation | 4.0 | 23.814 | 1 | 20 |
| Osa03LNT0212100.1 | osa-miR2096-5p | Cleavage | 5.0 | 22.219 | 1 | 21 |
| Osa03LNT0212100.1 | osa-miR5073 | Cleavage | 4.5 | 15.658 | 1 | 23 |
| Osa03LNT0212100.1 | osa-miR5073 | Cleavage | 5.0 | 12.44 | 1 | 23 |
| Osa03LNT0212100.1 | osa-miR5157a-3p | Cleavage | 5.0 | 11.846 | 1 | 24 |
| Osa03LNT0212100.1 | osa-miR5157b-3p | Cleavage | 5.0 | 11.846 | 1 | 24 |
| Osa03LNT0212100.1 | osa-miR5337a | Cleavage | 3.5 | 15.975 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0212100.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0212100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0212100.1 | 3 | dcf3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212100.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0212100.1 | 3 | qLVG3 | Resistance or Tolerance | Cold tolerance | RM251 | RM282 |
| Osa03LNT0212100.1 | 3 | ccs3 | Physiological trait | Source activity | RM282 | RM251 |
| Osa03LNT0212100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0212100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)