© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0213100.1
GTGTAGAAGTATACTGCATGTTGAAATTTGCAAGAAATTGAACAAGGGCAAGAACGTACGGTTTGCTTCCAGTACATTATATATCTCTATGTACTGTGCATGAGAAATTGAGAATATCCAAAAACTGGTCAGTATCTATTGCTATTTACTCTTATCTTCCTTTGGCCTGACGCCAGCTATAACTTATGTTCTGAATGAATTTGTGATCAACCCTAAGCAAAATCTATTCGTCTTCTGCTTCCTCATCAGAATCCTGGACAATGCTGTTCGTCTTAGCTCTTTTCCGTCTCGCTAAGACTCTTTCCCCCTCTTCATCAGATTCAGAATCTTCAACTGTGTTATCACTGCGTGCACTGGCCTGTGGATCTTCATCACCATTTGTTTCAAGAGGAGCATCTGGACCTTCCGCGTCCTCCTCAGGCATATTTTCAGATGACGCAGCTCTGGCTGCAGTAGAGTTCCTTTCCAGTTCGTCCTTCGATTGAATCTTAAAGTCTCTTGCCACGCTGCGCTTGGCATGCCTCAAGAGGTTCACCTTTGTAAGCTTGCTCAGCTGGATTAAATACTTCTCGTAATCTTCGATCTGGAAAATAAGATCTGGGATGCATTTGCTCTCTCTTTTGATCCTAGCCAGGATTCCTCTTTTTGACGCTTGCTGATTCTCTTGAACTAAAGCGACGAAGACGTAAAGTGGAGCAGTCAGCATCCTGCAAGTTACTTCTGCCAATTTCTGAAACTTGAGACCTGGCATGACTTGTTTGTATCCCTTAGGTGCAATCTGAGACTTGGCCATGCGAGCCAATAGCTTGTACAACTTGGCAGTCAGTTTCAGAAACTGTTCTGCCTGAGAATCCTTAAGGCTTGTATGTGCAAAAGACGAAAGGACATGAACTACGGATGTTGATCTTGAGTACAGTGCTTCCTCTAAATATAGCCTTTGCGTCCTTTCATCAGCAGGTTGATCATCCTCATCAATATTAGCAGAATCATATGCTAATGCAAGCATTACCTTAAGCTTACCAATTACCCAATCCAGCTCAGTAAGAGATGATTCAACCATTTGAAGAAACACAGCAGCAAGTGAATTCTTTGTTTTACAATTTATAACAGGAAATGTCTCTGACGAATCTCTCGAGTCCTCTTCTCCAGTGGTTATCAACTTCAACTCTGCAGTCATTTCATGCACGAGAACCAGATCATCTGGAGCTATCATAAGATGGATAGCAAGTTTTACCATCTCCTGTGCAATGCTTGGATTCTGGAGAATAGTTTTTTGACACAAACTTGCAGCCCAATGTCCAACAAGGTGACTTTGTTCATGATGTAGCTTTCTTGATATGCCGAGAATCAGTTCAGTTACAGCCTCAGATTCACGTGGTAGTGACTGGGAAAGAACTCGAACATATAACATCTTTAATATATTCAGAAAAACATGGACACTTCCTGTATTTGGATCAGTGTCATTCCTGCCAAGAAGCTGGCTGCAATGCACCATATCTTCTATATTTGGCGGAGCTGATGATACCAGGACATCAATAATATCACCAGGATGATCTTCTGGAACACTTAGCTTAGACATTTCTGTTAGGCATGTCAATGCTAGATACAGTTGGTCCTTTTTGCTATCCATGTGTTTCTTCCCTTGGGTCAAGTTCCTCTTGGTTCCACCATTTTCTTGCTTTGAATCTAGCATTATCCACCATATAAGCTGCATCATTGGCCCCACTAACTTTTTTACATCTTCATACAGCACAGCTCTTACATTTCCAGTAGTCGCTCCACTTCCCTTGGCTGCAAGTGATTTGAACATTCTATAACAGGCTTTCAGAACAAAAGATAATAGACTGTGGCATTGGTTCAATTTAGATTGGGTAGGACGCTGACTGCATTTTTCAAGGTTATCAGCATCACACTGCTTGACACACACCCTTACAAGTTCATATAAACTGGAATCCATAAAGGTCTCCCTCCTTTCATTTAATTTCTGCAGTGTTGCACTGTAATACTCCTTGGGTCCATTCATCTGCTTTGCAGTAGAATCACTTGAATTCCCTGCTCTTTGCGCAACCTTCTCCTTATTCTTGCTTTTTTTTCTCTCAAAGCTACTATGTGCATCAATAAGGTCCAGTATTTCTTTTTCTAACATTTCCTTTTGCTCATCAGCTACTTTCTCTAGTTTTGAAGCAGTAAAACCGATAAAAACCTCAATGATTCCAATCATAGCAAAATTATGGCAATGAGCCGTGTCCAAATGTGAAGAAAGAGAACAGGTTTCTTGGGTCTGCCCTCGTTGATCTTCTGCAAGACATTTCCTCAAGTACTTCTGGGTGTTTGATAAAGCTTTCACGAATAAGTCACTTGATGATAATCTTCCAACCTCATTATCCTGCGAAGGAGCAAACCCGAAGCACTTCCAATATGCATCTCGTGGTTGTTCACATTTACTATTTTGTTGAACTTGAAGAATACATGAGATACATGATAGTAGGCAATCTATTGGTTCCACAATGCTTACTTTGGCATTCTCGATTTTAAAACACGAGTCAATTTTAAGGGGACATTCTGCATGCTCTGTGTAATAGTTTAGGAAGTGCGGCCAAAGGAAATCAAGGACATTCTCAGCAATAGACGGATCTGAGGTAACAATTTGTATGAGTCCATTGTACAAGACCTCTTTGACTCTAGCCTGCTGCATGAAACATCTGCGAAGTAATCCACTCAGTTCTTGAAAGAGACCCCCACCAATCTCTAAATGTGTTTCAGGTTGCTGGCTAGAGCTTGGTTGACTAGATGAGTCTTGAAAAGGATTTGCTTCGGTTCTCTTATGCTTGTTCTCTGCAATAATCAGTTCAACAATAGCATTTGTGGCAGCAATCCGCACAGCATCCTCCCGCTTGAACATGGCCTTCCTTATAACCAATATTATGTAATCCTTTAGATCACGGCTAAACTTCGTGAGTGGCAGGATACAGTTGATCAGACCAATTGATATCTTGTCATTCAAGAATGCAAAATAGTCCAGCAATTCTTTAAGGTGCGAAATGTATTCAAGCATTTGAAATGGATGAGTACGAACTAAACCTCCAAGCAGTCTAATGACTGGTAAACTTTGAGAAGGCTTCACGGAGAGAATCCGGAACTTGCACTGCTCGATTATCTCAGTTCGTGCCATTCCATGGATATCAAACAATGACTTGAGCATATTAACACCTACTTCTTCAGTGCTCATAACCCCTTCATTGAAGCCAACTTCCTCCTTTCTGTCACTATCTGAGGCCTCCAACAGGAGAAAACCCACTTGAACAATGCTTGGCACAACATGCTCCCTTCCACCAATGCTCTCGCCAACAGCTTTCAGTAATGCCTTCTCCACGCAGTTAGCAGCCCGGGCGCACTCCCCTTTCAGGCATTCCGGCAACCATTTGCAGCGCCTCGATATCCGATAATCCCGGCGAGACGTGATGACGGCGTCCCGGAGCACGCCCACCGCGGCGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0213100.1 | 3 | 12720524 | T | C |
| Osa03LNT0213100.1 | 3 | 12719407 | A | G |
| Osa03LNT0213100.1 | 3 | 12721147 | C | T |
| Osa03LNT0213100.1 | 3 | 12721479 | G | A |
| Osa03LNT0213100.1 | 3 | 12722966 | C | T |
| Osa03LNT0213100.1 | 3 | 12723091 | A | G |
| Osa03LNT0213100.1 | 3 | 12723708 | G | C |
| Osa03LNT0213100.1 | 3 | 12720760 | A | C |
| Osa03LNT0213100.1 | 3 | 12723896 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0213100.1 | osa-miR5512b | Cleavage | 4.0 | 21.479 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR818f | Cleavage | 3.5 | 14.719 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR395t | Cleavage | 5.0 | 15.573 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR395a | Cleavage | 5.0 | 15.573 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR166g-5p | Translation | 4.0 | 16.79 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR171i-5p | Cleavage | 5.0 | 19.42 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR415 | Translation | 4.0 | 16.318 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR418 | Cleavage | 4.5 | 15.079 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR1425-3p | Cleavage | 5.0 | 9.677 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR1428a-5p | Cleavage | 4.5 | 19.205 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR2098-3p | Cleavage | 5.0 | 19.111 | 1 | 20 |
| Osa03LNT0213100.1 | osa-miR2101-3p | Translation | 5.0 | 15.422 | 1 | 22 |
| Osa03LNT0213100.1 | osa-miR2106 | Cleavage | 5.0 | 13.444 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR3981-3p | Cleavage | 5.0 | 15.676 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR5492 | Cleavage | 4.0 | 6.547 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR5512a | Cleavage | 4.0 | 21.479 | 1 | 21 |
| Osa03LNT0213100.1 | osa-miR5837.1 | Translation | 4.0 | 16.361 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0213100.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0213100.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213100.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0213100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213100.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213100.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0213100.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213100.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213100.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)