© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0213200.1
GGCCGCATCCCCGTTGCATCTTCCTTTGGCGGAAGCGGCACTCCATCCAGTCTCGCCGAGCCTTCGGCCGAGGACTTCCATCAGGTAGCTCTAGGAATCCCCTCTTCCCCAACCCCCCGCTGCCCCCATCCCCCGTCCCCTCCTCCATATCACCCTCCTTGAGTCATCGTACTGGACTCCGACGAGCTTCCATCGCCGCACATGGAGGCCCTGCTGCCTACGGCGGCTGCGCGAAGCCTCCCGTGGCAAGAGTTGCCTCCGCGCACAGACGCCGGCGAGCTATCGCGGGCCAGCAAACAAGTTATACCGCCCCGTTCGCCATTCTTGAGCTTCTTGAAGTGCAGTTCTTCATCCGTGCTGTGAGCGGACGCCGGCGAGACGACACGAGCTGAGCCGAGGCAACAATACGTTAAGGTCTTGAGAAGAGTGGTTTACACCAACGGATCCATGCAACAATGCTAGCAGAAGCTGAGTAGCCCATAGGCCATGGCGGCGACGAAGACTGTTTTTTTTTTTTTTGTCATGGAAGAACTAACACCCCTTTTCTATTCTTTTTTATAAAAATTAATGATTATAATTAAGACCAAAAGAGCCAATTTTTGGGATGAGGAAAATTGGTTCAAACTTCAAACCAAATACCTCTTGCTTCTTTTTGTCTTTTTGGGATGTAACTTCATCTAAGATTTCCGATATTTTTCCTCTGTCGAATACTTTTAATAGCAAGAATGTATAGAAAAGCTGAATAAGATACAAAAATTTGGGGACACTATGGACACACTGCAGAAAGTTGCAAACTTTGTCATTTAACTAGCTTTTGTTCAGGTAGGAGGAACTAGGATGTACTGATGATTGAACAAGCAGCTGCAATAGCTACTCCAATGGTATGAGATGTTGCTTTGCGCCTACATCCATTAGTATGTTAAGCGCGGCCATTTGAGGTGTCAGCCTAGCATGTATTTTTGTAAAGTGTATTGGCACACTATGGCTGTTGTATAGTATGCACTTATCTGAAAAAGTAACATTTTTGGAGTACATTAGAACAACGATGTGGCTGCGCACAGTGATGTCGCTTGATACAATGCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0213200.1 | 3 | 12758404 | G | T |
| Osa03LNT0213200.1 | 3 | 12757970 | C | T |
| Osa03LNT0213200.1 | 3 | 12757976 | A | G |
| Osa03LNT0213200.1 | 3 | 12758357 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0213200.1 | osa-miR812v | Translation | 4.0 | 23.902 | 1 | 24 |
| Osa03LNT0213200.1 | osa-miR6251 | Cleavage | 4.5 | 19.219 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR156k | Cleavage | 5.0 | 15.081 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR171e-5p | Cleavage | 4.5 | 18.056 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR172b | Cleavage | 5.0 | 12.935 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR535-5p | Cleavage | 5.0 | 15.081 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR1429-5p | Cleavage | 5.0 | 19.616 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR1848 | Cleavage | 5.0 | 21.137 | 1 | 21 |
| Osa03LNT0213200.1 | osa-miR1874-3p | Translation | 5.0 | 19.847 | 1 | 24 |
| Osa03LNT0213200.1 | osa-miR5528 | Cleavage | 5.0 | 14.858 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0213200.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213200.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0213200.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | RM7249 | RM3803 |
| Osa03LNT0213200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213200.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0213200.1 | 3 | qLEI3 | Resistance or Tolerance | Submergency tolerance | nan | nan |
| Osa03LNT0213200.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213200.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213200.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0213200.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)