© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0214400.1
GAATTGTTGTGTACTTCAATATCAATTAATCTATACCAGCATTACAGAAGAAAGCAATATCTAAAAATTTACAGCCAAAACTATATATATAGAGATACCATCAGTGAGTTGTGTTCACAAAACGCACTTTCAAGTTGCACAAGTACATACGGTACGGCTACCTAGCCGCAACTGCTATCTCCGAACCAACAACCTGCACACCGTGATCTCTGACGACGACATTGACGCCGCCGCTCTCGTCGTCGCCGCCGGCGAGTTGCCGTGCGTGCTGCAGCAGGAGCGTCTCGGCGGCGCTCCTGCCCAGGACGATCCTGCAGGTGCTCCAGTCGTCGGCCTCCATGTCCACTCCAAGGTATGTCAGGTGGTCTGACGCGCTCCAGAACAGCACCAGCACGCTCCTGGAGCAGTCTGGATCTTCGCCGCTGCCGTCGCAGACTTGGTAGACTGTGCTGCCATCGACTTCATGTTCCCAGACCTGAAATTTCAGTTAGTGCGTATGTATAGGTGATATATATGCGTAAGTGAGAACATTGTTTGGGTGGTGAAACGATGATGTATGATATATCAGAGTTCAGAGGGGGCGTTTGGTTTCTGCTATCTAGCAAGAAAACCGTTACAGTTTAAATTATATATTTAATTTATACAACCACGAGTGGTAGCATTTTTTCATTCTTCAAGCAGATAAAATAGGCTGGCAAATTAGTTTAAACATTTCATGATGCCAAGATGGAAAGAAAAAATACTGTTTTGCAGAAAACTACTTGCATTGTAATCTAGTTCAATGTGAAGAAAAAATTAAGCACAAACGTTGTGACTGCAGTTTAGTAGTACTTCCTCCGTTTCACAATATAAGTCATTCTAACATTTCCCATATTCATATTGATGTTAATGAATCTAGCTAGATATATATGTCTAGATTCATTAACATTAATATGAACTAGGAAGGTGGCCCGCGCGTATGCGCGGGCACTTATATTATTGAAAGGTAAGATTTTTATTATTTGTTTAAAGATTTTGTCTCATAGATTAAGGGAAAACTAAAGTTCGGATAATGTAATTTTATAATAATTTAAGGTTTCTATTTTTCTTAAAGTATCTTAAAAATCCATTCACAAATTTTTAAGTAGGAGATGGATTAAGTACTTACGACTTTTGAAACATGTTATTTTCTCGAGTAAATAATAAACTATATATTGCTTGTAGTATGGCTACAAATTAAAAATGTGAGAGCAAGATACTCAAAATTCTTGTGATTAAATCGTCTCATGAAGGCGCATGATATAGTAAGAAAGAGAGGGAAGCGTATATATGAAGAAAAGAAGAAAGGGAAAAATGATAAAAGGGAGGGGAAGCATAGGTACCCACGCGTACGTAGGTGCGTATCGAAGGTGGAGAGGTGGGACCTTGTAGTATTTAGTTTCTTCTAAGATCAATTTAATCTAATGGTTTATAATATTGAACCCACCGATTTAAGTGAAAATCAAGTAATAGATAATTTGCTTTTTTTCTTAGAATTTCTAATATGTTCTCTAATTTATTAGAGCACCAAGTGGTAGCTTGAGGGTATTTGAAATTTTAATGGACTTACCACATGTAATGAGAATATTAACATGTAATATATATGTATGGGATATATGTTAATATTCATTCTAGCTTTGTCCATGTTTATATACATGTAGAGAGAAATTAAATATGTTGCTAGCAAACCATTAGATGTCTAATTAATAGCAAATAATTTTGACACATATTTGCAATTGTTCATAGTAGCTCTTAAGATTCATGTTACCACTTTGATTATTCGTTGATCACCATGATTCGCACGAAAAAAATATGTACTACTTAGGGTTTAGGAAAACTGAAATTGATGAATTATCTGATTTATGTGATAGCTATTTGAGATTATAAACAAATGAATTAACTTCTAAATAGTTAAAAAGTCGTTTAAGAAAAGCACCATTTATAAACTTGGAAAAGCGTGGAGCGTGCAAACGAAAATGCAAAAGATGGAATCAATAAAAAAAATAAGGCCTTAAAACTCCCTTATTACTCTTATCCTAGTACGAATTATATTAATATGTGTTAATATTATGCTGAAAATAGGGAGGAGATTGGAGAGGAATGAATAGCATACAACTCGAGCCAGAGATGGGTTGGCAGTGTAACAGTGTTATGCACATGTGATTGGAGAGGGAGGTGGAGGGGACATTGTTTTTCTAATGTTTCTAAATAATGTAGGTGAGAACTCGTTGTTTTCTCATTCTAAAAATCTTTAACAGTTGATATATATGTGGTGGCTTAAGATTTTTTATTAACAAAAGCGGTAGCGTTGCAGCGATCGTGATCACCTAAGATGCCTCAGACACGATGCTTTGTCACACGTGCGAAAGGCAAAGGTGTAGATGTGCATTGTGCAGCGGACCAAAAAGAGAACTTTGGACACTTTAGTTATTAACAATAGATATGTTGATTTAAATAATGGGTCCACCGGTTCTAGTGTAAATGTAAATTAGTTAATATATATTTTAAATTGTTAATTTAATGGGTACACAATATGATGGTGTAGAATTTATTTTAAAATAGTATATTATTTGAGAATAATAGTCCAAATTAATAAAAAAAAAGATCCCATGATTTAAATAATGGGTCCATCTGTTTAAGTGCACGTATAATTAGTTAATATAGATCTTAAATTATTTATTTGATAAGTACACATTATAATTGTGTAAAGTTTATTTTAAAATAGTGTATTATTTGAAAATAATAGTACAAATTAATGAGTACACCGGTTTAATTGGAAATTATATTGATTTAATGGGTAAACATATAATGGTGTAAATTTTATTTTCAAAGATTGTAGAGCTAATTTAGTTAACTGTGTTTATAAAGAATTATATGATGGTATATTCTTTGTTTGTAAATTATGTTTATTTAGAATATATATATATCAATTATATAAATGGAAAAAAGAAGAGAGAAAAAGGAAGAAATAATTGGAGGGAGGCGTACATACTACATACCAAAATAATTGGAAGGAGGCGTACGTACTGCATACCCATGTACGTACGTGAGTTAGGTGGGACCCATAGTATTTGGTTTATTTTAGAATCAATTTTATCTAACGGTGTATAATATTGGACCCACCAATTTAAGTGAAAATCAAGGGGTAGATGTTTTGCTTTTTTCTTAGAATTTACAGGATTTTCTCTAATTTATTAGAGCGCCATGTGGTAACTTGAGAGCGTTTGTAGGAAGTTTAATGGACTTTTAGTATATAATAGATAGATAGATGTGGAAAATGCTAGAATGACTTACATTGTGAAACAGAGGGAGTAGCAAATTTCCTGTTTTTATGCAAGAGCTAGCATACCTCTGTTGGGAAGTGATGGTATGTTTGGTCTGGAAAAATGAAAAAATATGGGGGCAAATGCGGCACAATGTCATGCTCATGTGTCACTCGAATTGTATTGGGCACATATTTGGTAAAGTAGGATGCAAATGCAGCGTTGCCAACGCGCGGCTGCCCAAAAGTCATCAGGTAAACATTGTTGCCTCCATGGGTAATCGCAAGATCAAGTGCACAGAAAGAAGCAAGCGCTCCTCCCATTGAATGCCCTGTAACTATTATGCTAATATCTCCATATAACTTCCTCGCCTTGTGAACGGCGTTTGCGATGGCTGGACGTAAAAGTGTGTTATTGTAAGAAGAGTAAAATCCAGTGTGAACCTTTGCGTCGGGCATGTCCGGGTAGTTCAGATCAGATTGCTTCCATAGCATATCCTTAATCCAATTCTGTACACTGTTCTCTTGAGTTCCCCTGATTGAAACAATGATAGCGTTGAGATTGTGATCGACACCAACAAATGCCTGCAAGCAGTTCTGGACATCAACGATTAGACGTCTCATCTCGAACCCTTGGATTAAGTCATTGCATTTTGAGCATGTCCATGTATAGAGCTCTGTTAGATCTGTCATATAGACAGCTGAGGCATACTCCACAATAGTCTTGGCAAGTGTAAGGTTGAAACCAAAGCTCTGCTCACTATTCTGGACACTGGATTCTGTTGCTGCTACGATCCCATGGGGTGGGCGCGATGCAGCAGGGATGAGCACCAGAAGCATCGCCGCCGCCGCCGGCCGCCTCCGCTTCTCCATATGCCAACGTTGCACCTCCGCTACTTTCTTTTTCAAGATAATGAAAAATTTTATTGAATCCAGTCAATTACATCAAGATGAACCTCCTAATTCGGAGGAGTTAGCTGCAGAGAGAGAGAGAGAGAGAGAGACGATGGAGTGGAGGAGGAGAAATCGAGAAGCAGAGGAGGAGGTTGCAGGACGGATGGAAGGAAGGAAGAAATTGGCAGGTTGGTAG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0214400.1 | 3 | 13088133 | T | G |
| Osa03LNT0214400.1 | 3 | 13088276 | T | A |
| Osa03LNT0214400.1 | 3 | 13088434 | T | C |
| Osa03LNT0214400.1 | 3 | 13089773 | A | G |
| Osa03LNT0214400.1 | 3 | 13091515 | T | C |
| Osa03LNT0214400.1 | 3 | 13092996 | T | C |
| Osa03LNT0214400.1 | 3 | 13093001 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0214400.1 | osa-miR5537 | Cleavage | 5.0 | 7.434 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR5543 | Translation | 4.0 | 13.778 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR5791 | Translation | 5.0 | 15.535 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR5815 | Translation | 4.5 | 14.83 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR1319b | Translation | 5.0 | 20.079 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR1319b | Translation | 5.0 | 13.912 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR5837.1 | Cleavage | 4.0 | 12.986 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR6251 | Translation | 4.0 | 14.973 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR398a | Cleavage | 5.0 | 15.744 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR167d-3p | Cleavage | 3.5 | 11.786 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR528-3p | Translation | 4.5 | 18.65 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR810a | Cleavage | 4.0 | 10.865 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR818a | Cleavage | 5.0 | 8.458 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR818b | Cleavage | 5.0 | 8.458 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR818c | Cleavage | 5.0 | 8.458 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR818d | Cleavage | 5.0 | 8.458 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR818e | Cleavage | 5.0 | 8.458 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR1436 | Cleavage | 4.5 | 9.355 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR1439 | Cleavage | 3.5 | 12.987 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR1439 | Translation | 5.0 | 16.202 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR1439 | Translation | 5.0 | 11.871 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR1850.3 | Cleavage | 5.0 | 13.624 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR1866-3p | Cleavage | 4.5 | 13.731 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR1866-3p | Translation | 5.0 | 12.652 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR1866-3p | Translation | 5.0 | 9.112 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR812f | Cleavage | 5.0 | 14.557 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR812g | Cleavage | 5.0 | 11.521 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR812h | Cleavage | 5.0 | 11.521 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR812i | Cleavage | 5.0 | 11.521 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR812j | Cleavage | 5.0 | 11.521 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2092-5p | Translation | 4.5 | 15.154 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR2098-5p | Cleavage | 4.5 | 16.868 | 1 | 20 |
| Osa03LNT0214400.1 | osa-miR2100-5p | Cleavage | 5.0 | 15.989 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR2101-5p | Translation | 5.0 | 14.467 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR2101-3p | Translation | 5.0 | 23.56 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR2121a | Translation | 4.5 | 13.792 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2121b | Translation | 4.5 | 13.792 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2876-5p | Cleavage | 5.0 | 19.586 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR2878-5p | Translation | 5.0 | 15.764 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2878-5p | Translation | 4.5 | 17.833 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2878-5p | Cleavage | 4.0 | 17.887 | 1 | 24 |
| Osa03LNT0214400.1 | osa-miR2931 | Cleavage | 4.5 | 14.13 | 1 | 20 |
| Osa03LNT0214400.1 | osa-miR395x | Cleavage | 4.5 | 13.357 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR3981-3p | Translation | 4.0 | 19.511 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR5490 | Cleavage | 5.0 | 17.987 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR5501 | Cleavage | 5.0 | 17.616 | 1 | 21 |
| Osa03LNT0214400.1 | osa-miR2275d | Cleavage | 4.0 | 12.893 | 1 | 22 |
| Osa03LNT0214400.1 | osa-miR2863b | Cleavage | 4.0 | 15.612 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0214400.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0214400.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214400.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214400.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214400.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214400.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)