© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0214500.1
CTCCATGTATTACACTAATTTAAAGAACACATCAAGTTGCAACTTGCAACACACAACTTGGCATTTTTGGCTACACAAGCCTGCCGTTTACAATGTAAATTGGGGGAGATTAAAAAGAAGAAGAAACTCTCTAGGTTTCAACAGCCGGCACCGCCCAAGAATGTGTAACAATTAGAAAAAAAAAACAAACTAGAACAGAATTACAAGCCAGGAGGCCAGAAAGATCACAGGTGGCTATTATGTACACTGCAGCAGCAGCATCCGGGGCAGCAACTTCAGGAGATGGACTTGGTGTTTTTTTTTCTGCCCAAATCCAAACAAATCCTTGTGCTTCAATGTCAAGCGTGACTCGTGCACGCTACGCCTGCCGATCCAGCTTATCATGCTTCCACGGTTCGTCCTTCATCCAGCACCTTATCTCATTCACAGGCTATTTTGGTATCAAAACTGCTCAGACAGATTGCAAATGATTGAAATGCTGATATCGGATAACGGTAGTCCATGGTGAACAAGTCCTTCCCAATCTTTCCAAACTGGAGAATCACCTTGTCCTGCTCCTGGTTAGTTGGCCCATTTTCATCAGACGCCACCAGCTGAAAGTTTTTCACTGAGGCAACAGTAACCCGTCCACGGAAGTTGAGGCACCAACATTGCAGTTGCTCATGCCACCTAGGAGATTTATTCTTCAGAACCAGCTTTTCTTCCTTCTGAGTGGATAATTGTGAAGTTGCACTATCTATTCGAGCTGATTTTGATCTGAAGAATGAAATTGATGGGAAAGAGTCGAGGCCACTGAGAGGAAATTCAGTCTGTGTCGGAGCTTTCCCACCCTCTTGAACAGCTGATGTGGGGATGGAATCCATAATGCAGTTCATCCTTCTTGGACCTCTTGCACCCAAAACATTCAATTCGTAGGAAATATGTGAAACTGGGTAATTCCCGGCAGGAACTCTCGGGGAGACTTGGTTCAGACCAACCACACGTGCAGACCGACTTTTTGAGACAACAGCTCCATCATATGGTGGATGGGCATCATAGACGGTAAACTTTGTTCCGAGAAAGTTTGACCTTAGCTTGCCAATATAGGTGTTGCTCCCCTTTGACATATCACTCATGTCAAGGGAAATCAGGTAGTCTGTGCATGTGGGCTTCCTGCATTTGCGTGCAGCAAGTAGGAACTTCCCATCATCGGCAAGTGCTTCTGTGAGCCCAATATACAGATAATATGTCTGAGTAGTCCGGTTTCTTCTTATGAAACATTTAAGAGTGCCGTCTCTTGGGCCAGGCTGCTTGAGCGAGATGGGGAAGGTGAGCTTGCCGGACGCCTCCGGGACGCGGACGATCTCCTTGGTGATCCCCCTCCAGCTCCGGCAGACGCCGGCGCACGCCACCACGTCCCTCCGCGACGGCCACCACACCTCCGACTCCTCGATCCTCACCAGCACCTCCCGGAGCAGCTCGGGCGGCAGCTGCGCCCAGCAGCTCTGCTGCATCGCCGCCGCCTCCGCCGGCCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0214500.1 | 3 | 13165085 | T | C |
| Osa03LNT0214500.1 | 3 | 13165210 | T | G |
| Osa03LNT0214500.1 | 3 | 13166262 | G | A |
| Osa03LNT0214500.1 | 3 | 13167391 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0214500.1 | osa-miR435 | Cleavage | 4.0 | 21.984 | 1 | 20 |
| Osa03LNT0214500.1 | osa-miR444b.2 | Cleavage | 3.5 | 17.367 | 1 | 21 |
| Osa03LNT0214500.1 | osa-miR444c.2 | Cleavage | 3.5 | 17.367 | 1 | 21 |
| Osa03LNT0214500.1 | osa-miR444f | Cleavage | 4.5 | 17.367 | 1 | 21 |
| Osa03LNT0214500.1 | osa-miR2275a | Cleavage | 4.0 | 18.177 | 1 | 22 |
| Osa03LNT0214500.1 | osa-miR2275b | Cleavage | 4.0 | 18.177 | 1 | 22 |
| Osa03LNT0214500.1 | osa-miR5339 | Translation | 5.0 | 18.192 | 1 | 21 |
| Osa03LNT0214500.1 | osa-miR5083 | Translation | 4.5 | 20.368 | 1 | 20 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0214500.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Osa03LNT0214500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0214500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0214500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214500.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0214500.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)