© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0215700.1
AGCACAAACTAGCCCACGTTCCGGATCAAACTTTACTTAGCTCAATGTCGTCGTGGTATGTACTACTACCAAACAGACAATACATTATACAGCTATTTTTTTTCCTAGCAACAAATCACAGCCGCAGCAGCGTAAGAACATCAGCATCACGGTGACAGGGGGAGGAGAAAGACGGCAACCGGAGGCGGCTAAAACGGTGCCCACAGGCGTCGCCTTTCAGAAGAACCATCACAAAGGAAGAACCGCATACTAACTGACAAACAGGGCATGATGCAAAACACAATGTGCACCAGAAAATGTACATACAACCGCAGCACGGGGTTTGAAGTTGCGGAGGATCAGAGGATGATGAGCACCGGTGGTGGCGCGCTCGCGTTTCTTCACCATGGAGTCTTGTCGCCTGGACCGGCAAGGATGATATTGCAATCTATGGCGAATCGCCGGGTGAGCATGATTGCGGTGTTGCGTTCTCTCGTCGTTTCGAAGGCCAGGACCATGCTGAGGTCATTCCTCGGCCGCCAGAACATCGCCTGAGAAGCTGCTTCACCGCCACCTCGGACACCGCATAGCTGCATTGATGACGAATAGAATTCCTTGGCAACCACTGTCTTTCCTTTAGAAAGCCTCATCCTCAATTTTCCAATATTGAGAACATGAACAGACTCTTTTGGCTGATCAATTCCATTCAACTGAAGCACAACAACATTGAACTCAGTTTCACGTTTCCTTACGAGTGTCTCTACATAATCGACCAATCCAGCGTCAGGGTCTATTGGCCCAGCTGTCTTTGCTATAGCAATTTCACCACCATAATTAATTTCAGCTTCCAAATACCGTCCAACGTCATGTGGTTCGGGAGCATATACTGATCTTGTGGCACCTGAAATAATCTCTTTGTTACTTTCTTTTGGGTGTACACGGAACCACTGGATTGAAATATTTGAGAAATCCATGGTAGTACTGCTCTGAGAAACTATGCGTAGTATTGAGCCTAAGCATTGGAGACCCTCCAAATCAAACAAAGGGATATCATTTCCCTCTGGCCTTTTGTGCAGTTCCAACTCTTTCAAAAGATTAACACAATCCGTGGACCTCTCAACGAACGTCTTACGCAAAATTTTGATCTCATTTTCCAGATCCATTGCCTTGCTGGGGTAATGAAGCATTTTGATTCTTCGCGCCTCTCTAACTTCTTTCTTTAGTTCCTCCATATCTTGCTTTCCAGTTGTTCTGGACATCTTTTCATGTTCCTGAAGTGCTTGTTGAACTCTTTGCACAGAAGACCTAGCACTTTCAATCTCTGTATGAGCACTTGCCCTTTCTTCGTCAACGATTTTTTTGGCATCTTCAGAAGCAAGCTTTAATGATTTTGCTAATTCTGTGACTTCTGCCTTTTGCTGAAGCAGCTCAGCTTCTCTTTTGGAGAGCTGGACAGCAAGAATATCAACCATAGATATAGAGTCCTCAAGTTCAGCCTTAGTTTTGCCTGTCACACGGCCTCTCAGTGACTCTAATACAGTCTTTAGATTCTTCAGAAGGATATCACGCTCCAACAAAGCCACTTGTCTCCATTTAACCTCATTGGACAGCAAAGTGGCAGTATTGAGACCCTTCTCAAACTTCATTGCAAGCTCACGGACTGACAGACGCTGACGATGATCAAGCATATCCGCAGTTTCCTTGGTGACAGTCTCCTTGAGAGATGGCATTTCAGGGCCATCAGCCAGCTTGACTACTATACCATTCAAACCATTTTTGTAGGTAGGAAATTTAGCCCTGATGATGTTTGCAGGACGTAACGGCCCAGGCCGTAAAGTCTCAGTCTGAGCCTTGCCTCCATAATCACGAGTCTGAACCTTGCCCCCATAATCAAGAGTTACTGCCCGGGTCATCTCCCGCACGGATCTCCGCGGAGTTCTTGTGCCGATTCGGCGCCGCCAATGGGGATGACGAACTTGAGGCTGGTTTCCCGCGTGGTTTGGGGGATCTTGCGAGGAGGAGGGGTTGGTTACTTGGTTTGCGTCGAGAAGAAAGAAAAAAAAACGCTTCTTTTCTGCAGAGGGAGCTTTTGCTTTCTTCTCCTCTTCTCTCTCTCGTATCAAATGGGGGGATGAGGCTG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0215700.1 | 3 | 14213509 | G | A |
| Osa03LNT0215700.1 | 3 | 14214174 | C | T |
| Osa03LNT0215700.1 | 3 | 14215587 | A | T |
| Osa03LNT0215700.1 | 3 | 14216005 | T | C |
| Osa03LNT0215700.1 | 3 | 14216693 | T | C |
| Osa03LNT0215700.1 | 3 | 14217572 | A | T |
| Osa03LNT0215700.1 | 3 | 14217619 | A | T |
| Osa03LNT0215700.1 | 3 | 14217786 | A | G |
| Osa03LNT0215700.1 | 3 | 14217861 | A | G |
| Osa03LNT0215700.1 | 3 | 14218105 | C | T |
| Osa03LNT0215700.1 | 3 | 14218725 | G | A |
| Osa03LNT0215700.1 | 3 | 14215010 | G | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0215700.1 | osa-miR6251 | Translation | 5.0 | 10.097 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR169q | Cleavage | 4.5 | 18.068 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR415 | Cleavage | 5.0 | 24.214 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR440 | Translation | 5.0 | 16.474 | 1 | 24 |
| Osa03LNT0215700.1 | osa-miR1857-5p | Cleavage | 2.5 | 14.984 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR1857-5p | Cleavage | 4.5 | 16.713 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR1860-5p | Cleavage | 5.0 | 23.961 | 1 | 21 |
| Osa03LNT0215700.1 | osa-miR2907a | Translation | 4.5 | 23.033 | 1 | 22 |
| Osa03LNT0215700.1 | osa-miR2907b | Translation | 4.5 | 23.033 | 1 | 22 |
| Osa03LNT0215700.1 | osa-miR2907c | Translation | 4.5 | 23.033 | 1 | 22 |
| Osa03LNT0215700.1 | osa-miR2907d | Translation | 4.5 | 23.033 | 1 | 22 |
| Osa03LNT0215700.1 | osa-miR5519 | Translation | 5.0 | 16.321 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0215700.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0215700.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215700.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0215700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215700.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0215700.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0215700.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215700.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215700.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0215700.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)