© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0216300.1
CCTAGTTAATCCAGATCACCCTTTCTTAAATTTGAGAGGAGTTATTAATTAATCCACATCATCTATGAGCACACGCGGAAGAGGAGGAATCGGATCCGTGCCGCGTTGCTCCGGGCCCTCGCCGTCATCGTGGGCCCGGCCCATGACCAGCACGCTCAGCACCACGCGCCTCCCCCTCATCACCACCCTCTCCCCATGCACCATCGCCACCACCACCTCCTCCTCCTCCGCCTCCGCCGCCGTCGCCGGCGGCATCTCGTGCCGGCACAGCGGGCAGCTGCCGTGGATCCCCAGCCACCGCTCCACGCACTCGCCGTGGAACCGGTGCCCGCACGGCATCTCCTTCCTCCTCCCGCTCCCGCACGTCTCCCTGGACTCCTCCCCGTCGTCGAGGCAGATCGCGCAGTCGGACGCCTCCTCGCCGTCGTCATCCTCCTCCTCGACCTCCCTCAGCGCCGCGATCGATGCCCTGGACGCCGGGGCCACGCCGCCGCCACCGTCGGCGCTGGCGCTGCCGTCCTCGTAGAAGACGTGGTGCACCAGGTACGCCCGCCCCCGCAGCTCCGGCGCCGACGAGACGGACGCCCCGACGAGCACCGGCGGCACGCCCGCCACCGTCCGCCCGCTGTCCCTGTCCGTCACCGGCGTCACGATCGACACCATCGACGAGGGAGCATTGGTGAGCGACATTACCCGATCTCTTCAATTTCCTCTTAATAATTCTTCGCGATGCTTTTGCTACCATCTGCCTCGCTCTCGCTATCGTTCTCGCTCGATTTGATATAGAGGAGGAAAAGACGCCTTCTCGATGATCGGTGGATTGGGTTGATGATGCGCATGGCGCCAAAGGGTTCGAGGTAGGTGAGCCTTTTTTTTCTTTTTTGTCTCACAATTTTGCAGCTCCGACAAAGCGGTGGCGATCGATTGGGATTTGGGCTCCACATGTGCACTTCGTCTTCTTGCAGCAACACAAGGTCCATCACTTCAATTTTGGATGCATGCTGATTTTGCTTGGATTCAGGCTGAATTTGGTTTGTTTGGACACCAGAAATGTCCTTTTTTGACTAGGAAGGTTGTTGCTGTTCTTGACATCCCAGTGCAAAAGGGGTTTGATGATTCACAATTTTGGAATGTTCTTGGAAGATCTCTTTGATGATTGACAATTTTGGGGTGTTCTTGGAAGATTTCTCATGGTGGAGCCATGTGCGCAGAAACTCAGCAAAAAGGCAGACCTGTGAATTTGTTGATATATACTGGATTGTTATTGACATTTTTGACCTTTTGTAACTATGCAAAATACTACAGGTCAACATAAACTGTGACGTACTCTACAATTTAAAAATGCTTTCTGGAGAAATTTAAACACAGAAAAGAATCACATATCAGATTGATGAAACGGCAGCAGATTTGACTTGATTTGTCAGAAGCAGCAATGATCAGGTAGAGTGCCAACGCAATTCAGCCCCAGAAGAAAGAAGGCTAATCCTTGGAGATAGAGATTTATGTAGAAGCTGTTCTTTCCATGGAAGACAAGGTTGTAGGATGCACAAAAGATGAGGAACACCGATAATCCGATCTCAGGTAGATTCACTCTGTTTATTAACCTTTTCCTGGATTTTTGAAGCAATGGAGTCTCATTATTCTCGTCGAAGGCATTGTTCCCCACTTTCTTCGTCACAATCCATTGGTTGAATTCTTGCAGTTGCAGCAGACCAGCTACAGCAGCTCTCAACCGATGCATGGACATGACGCTCTCGAATAAAATCCACAGTGGCACTGTGTGCAGATTTTCTGGATTTCTTATGGCAGTGACAATCAGGAGTGCTGTAGGAATGTAGGCAACGCCCCAGATTGGCAGGAAGAGCTCTGGGATCATGACCGACACAGGGATGATAACATTGTAGAGAATAAAGGCAACAGCAGGGGCAACAACTCTCCTCACCAGGAAGAAGCTATACAGTATGTAGATCTTCTTCAAGGATGACACTTTCTTGGCAACCAAGACATCCCATATCATCTTTCGGAACAAGTTTGCACCGCCACAAGACCACCGGAACTGTTGTCGGCAGTATGCTTTATAAGTGGATGGAAGCTCACTCTTTACTCTGAGGTCCCCTAAATAGATGAATTTCCATCCCTTTAAGGTTGCTCGGACAGCCAAGTCCATGTCTTCAACTGTAGTTCGATCCTTCCAACCTCCTGCGTCATTGATAGCTTCTGTGCGCCATACACCAGCGGTCCCATTGAAACTGAAGAAAGCAAATGTAGCCGATCCTGCCTCCTGCTCAGCTTTGAAGTGGTAATCAAGGAATGTCTTCTGTATCCTTGTCAGTAGGCTTACTCTGTCATTCACAAAAACCCACCGAGCTTGTACAAGCGCAACATTCTGATTGTGCATGAGGAACGGGACAGTTCTGAGAAGGAAATCCGGTTCTGGCTGGAAATCAGCATCAAATATGGCAACATATTCGCATTGCTTGGCATAGTCCCACTCCATTCCCTTCTTCAAGGCTCCTGCTTTGAACCCTTTGCGGCCACTTCTGGTGGCATACTTAATGTTTAGACCTTTGCTTGCCCAATCCTCACATTCCAGCTCAACCAAATTCTTGATAAATGCGTCCGTGGAATCATCCAAAACTTGGATTATCAACCTCTCCTTTGGCCACTTGAGCCCACAAACTGCTCCGATTGACAACTTGTACACCTCGAGCTCATTATACATGGGTATCTGGACCATGACCATGGGATAAGCAGCAGCAGCAGCCTCCCCCTTCTCCTCGTCGCCGGCGCCGGCGCCGCCGCCGAGGGGCTCCCACTTGAACCACCGCTCCGGCCTCCAGCCGACGAGCCTGGCGGCGACGCTGACGGCGGAGTTGTAGGTGGCCTCCACCACCAGCATCACCGACATCACCATGCACGCCCACACCCCGACCTGCAGCGCCGGCGCCACCGCGCGCGACCGCGCCCCCACCCACGCCTCGCGCCACCACGCGCCGCCGCCGCTCCCCGGCGACGTCGACGATCCCTCGCCGACGACTGGGAACGTACCACGACAAGAGCTCAGCTCACTGAAAGCAAGAAGCTAATTAACTTGGATGGGAAAATAAAAATGGAAAGAAAATCTTGGAACCTGTGACGAGGTAGGTGAAGTCGAGGGCGCCGGTGGAGACGGCGGCGAGGAGGGAGACGGCGGCGGCGAGGAGGAAGAGGACGGCGCCGGCTGCCTCGCCGGCCTCCATTGTTTCTCCGGGCGGTGGCGGCTGCCGTGGCCTCTGGAGAGAGAGAGGAGAGGAGAGTGATGTAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0216300.1 | 3 | 14926605 | A | T |
| Osa03LNT0216300.1 | 3 | 14925370 | T | C |
| Osa03LNT0216300.1 | 3 | 14926781 | C | T |
| Osa03LNT0216300.1 | 3 | 14926847 | T | C |
| Osa03LNT0216300.1 | 3 | 14927178 | C | A |
| Osa03LNT0216300.1 | 3 | 14928770 | T | C |
| Osa03LNT0216300.1 | 3 | 14929063 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0216300.1 | osa-miR5539a | Translation | 5.0 | 16.631 | 1 | 22 |
| Osa03LNT0216300.1 | osa-miR5819 | Translation | 4.5 | 12.059 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR2873c | Cleavage | 4.5 | 16.645 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR2873c | Cleavage | 5.0 | 17.006 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR5539b | Translation | 5.0 | 16.631 | 1 | 22 |
| Osa03LNT0216300.1 | osa-miR815a | Cleavage | 3.0 | 15.478 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR815b | Cleavage | 3.0 | 15.478 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR815c | Cleavage | 3.0 | 15.478 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR1425-3p | Cleavage | 4.5 | 20.823 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR1427 | Cleavage | 5.0 | 23.641 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR1854-3p | Cleavage | 4.0 | 22.111 | 1 | 22 |
| Osa03LNT0216300.1 | osa-miR1858a | Translation | 4.0 | 14.867 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR1858b | Translation | 4.0 | 14.867 | 1 | 21 |
| Osa03LNT0216300.1 | osa-miR2098-3p | Cleavage | 4.5 | 12.899 | 1 | 20 |
| Osa03LNT0216300.1 | osa-miR2923 | Translation | 4.5 | 13.2 | 1 | 22 |
| Osa03LNT0216300.1 | osa-miR2923 | Translation | 5.0 | 17.813 | 1 | 22 |
| Osa03LNT0216300.1 | osa-miR5502 | Translation | 5.0 | 16.95 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0216300.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0216300.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216300.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216300.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0216300.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0216300.1 | 3 | qOE3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0216300.1 | 3 | qTA3 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0216300.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)