© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0216500.1
AAACCAACCATAATCTCAGACGTCAGACGTTCCAAGTAACAAGAGTTAGACGCAACACACTAGACAGTGATAGAACAAAAAACATTCCTTCTGTAGAAAATACATTTGCTGCTTCTACACTAGCCTACAGCTACTCTCTCTTGCAGCAAAATACCTAACAGCAGTCGCCGCCTCCTGTTATTTCAAATGAACTGCAAGAGCCAGCTGCTGAGCTGTAATACACCATTTTTCCTCCACATGCCCCCATACTAGCGACAAGAAAAAAAGAGGCTACAGCTCCTCATTCTCTCTTGCCTTTGCCCTGTGAAGCAAGCTTGGCTGCCACTTCCTCTTCTGATAAAGGAAGGTAATAAATCCTAGGAGAAGAATGTGTCTTCCTGAAGAGATCATCGAGTGTCACAACAGGAGGTTCCGGCTGTTTCTTTGGGGTGGGTGGAAGCCTCTCCTTTGCTGATCCTGAGTCAGATGTAGGAAGCGTAGTAAGAGGCGGTGGAGGTGGCAAGTGCTCCCTTGGTGCAGCGGCTTGACGAGGCATGTTTTGATTAGCCTGAGCCTGTTGAAAGGGTGGCTCCTTTGGTGTAGTAGCAGGGCTAATAGGAGCCGCCGCTGGCGGAGGAGGTTCAAGTTTGAGCTTCACTTCCTGGGGATCAACAAATTCAGCAACCAAACGATTGCCGTTGTTTGGTGGCCACTGCAAATCGTAGACAGCATCCCGAGTAGCCACAGCTTCCTCTACTGATGAAAACGTAACATAGCAGTGGGTCTTGATGTGATCCATCCAGAAACTACAAAGAGATCCAGTTTTACCAAGAAGTTCTTGCACAGCCTTCAGCGTAAATGGCCTTACAAATCGATCAATTCTCAAGGAAGCTGTTGCAGGTTTCTGAGATGGTGGCACAACCCGCTCCTTTGGGGAATCTCCACTAGCTGTTGAATCAGACCTGCCAAAAGATCGTTTTAAAGCAGGCTGAAAATTTTCCTTAGGAGCATCAGAGCCACTATGACTTATTGGTTGTCTCTCTGGAACTTTGGCACCATCTGCAGCCCATCGACGCTGGCGTTTGATTGGCTCAGTGGCAGCAACAGTTTCTTCAGCTTCGAGTTTCCTCTTTTCAGTTGAAGCTGCTGTCTTTTCATCAGCTATAACTTCTTTCGTGTCAACAGAGGAATTGTCCACAACAGTATCAGGGAGGGACACCTCTTTCACATGATCTGAGCTAAGCTCAGCTGTTCCTTCAGATTTAATGTTGGACTCAACTTGCTTAATCTCCATGACATCCTCCTCCATTGACTCATCACCTGAACTCCTGTCTAAATTTAGTTTCTCTGGAGAGCCGCCTTCATCCACATTAGCTGTGGAATCTATGTATTCCAAAGATGACTGGTTTTTACCCAGATCTTTGTCATCATCCAATGGCTGCAAATCTCCACCTATGGAAGTAATGCCAGAAGATGGTTTTACCATCTCTGGCTTAGCCTCTAGTTCTAAATCAAAATTATTAGCATTCAAATTATCCTTTATATTATTCTTTTTGTTAGTTGATATATCATCGCTAGAAATTGACTCACACTTAATTGGAGACCCTAAATCTGGGCTAACCTCAGGTACCTGATCATTTGGTTTTGGTGCGATGGGCTTCTCGTCCTCATTCGTGAGCTCAGAATCTTTGCGCTCTTCATCATACACTGAAGTAGTGTCACCCAAATCATTAAGAACCGCCTTCTCAGTTGCAACATCAGTATCCATAGGATCAGCATCTGTTGGGATGGCATCCACAGTTGTTGCTACTGTGTCATGTTGTTGAACTTTGCTGGCTTCAGTAGCATCTATCTTGATATCAGAAGAGGTCATGTCTGACTCTACATCAGCACTGGTCATATCAAGGGCACCAATTGCTTCGTTGGTGCCAACATCTTGTGTCTTCTCAACAAAAGGTTCAGTATTATTTTCAGCATGAAGATGTTCGTTTTCCACTGTGGAAACATCTCCTGCAATTGGTGGCTCTTCTCCTTTGTCTGTTGGGGCCTTGCTTAAGGGAGCTTCATGGGTTGCCACCGCGTTAACCTTGGGGGGCTCTTCGGCAGCTGAAACTGTGAGCGACTGACTTACTTCAGTGATAGGAGGTGTAGCTTCCTGAGTTACTTGAACCACAGTTTCCTTGTGAACTTCTGTAATAGAAACTGTAGTTTCCTGAGAAACACTCTGTATTTCAGATGCCTGGTTAGCTGCTGGATTCACTTCGACAGTTTCATTATCTTGTTCTTCTTCTTCTTCTTCTTTTTCACTCTGAATTGACTCGAAGAGTCGCCTTACAAGTTCATCTTTCAAGCCTTTAACAGGGAGCCTCCTCTTACGAAGTTCATCCTTCAGATCAGTAACTCTCCATTGATCAATAGGTCTGTTGTTTAGCACAGGGTATGATGACATTGTAGCTGACAACCCCGGCGCACAGAGATCGGACGTCGGAGACGGGAGGGGCACGACCCTTCACGGAAGCGCCAAAACCCAGCCGCCGCGAATCCTCCGAGGCCACGCGCGCTCCTGAAACAACACAACCAAAGAAAAAAAAAAGCACCCAAAAAAAGTTTCTCCCCCAAACAGAACAAAATCTCGCGGAAAAAAGGGAAGCGGAGCAGGAGGACGGCACAGCCGGAAGAGGATTAGATTGGAGAGGGGAGTGGTGGTTGCAGGCGAATCAGGGGGAGGGGGGGAACACCGGGTGGGATTGGAGCTCGCGTCGCGTGCGTGGAGTTCTAGGGTTTGGGGGCGCGCGGCGCGGAGGGAGGAGAGAGAGGAGGTGGATGTGCGGGGTACGGGGCGCGTGTGGTGCGGGGGAC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0216500.1 | 3 | 15216513 | T | C |
| Osa03LNT0216500.1 | 3 | 15214330 | T | C |
| Osa03LNT0216500.1 | 3 | 15214861 | T | G |
| Osa03LNT0216500.1 | 3 | 15214904 | T | C |
| Osa03LNT0216500.1 | 3 | 15215664 | C | T |
| Osa03LNT0216500.1 | 3 | 15216023 | T | C |
| Osa03LNT0216500.1 | 3 | 15216651 | G | A |
| Osa03LNT0216500.1 | 3 | 15216677 | T | A |
| Osa03LNT0216500.1 | 3 | 15216910 | C | T |
| Osa03LNT0216500.1 | 3 | 15217078 | T | C |
| Osa03LNT0216500.1 | 3 | 15218556 | A | G |
| Osa03LNT0216500.1 | 3 | 15217661 | G | C |
| Osa03LNT0216500.1 | 3 | 15216515 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0216500.1 | osa-miR5526 | Cleavage | 5.0 | 15.003 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR5832 | Translation | 5.0 | 20.92 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR5832 | Cleavage | 5.0 | 24.044 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR162b | Translation | 4.5 | 21.575 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR1861n | Cleavage | 4.0 | 17.1 | 1 | 22 |
| Osa03LNT0216500.1 | osa-miR1846e | Translation | 4.5 | 21.837 | 1 | 20 |
| Osa03LNT0216500.1 | osa-miR5147 | Cleavage | 4.5 | 19.952 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR5149 | Cleavage | 5.0 | 14.61 | 1 | 22 |
| Osa03LNT0216500.1 | osa-miR5151 | Cleavage | 5.0 | 19.336 | 1 | 22 |
| Osa03LNT0216500.1 | osa-miR5152-5p | Cleavage | 3.5 | 15.091 | 1 | 21 |
| Osa03LNT0216500.1 | osa-miR5157a-3p | Cleavage | 4.0 | 19.084 | 1 | 24 |
| Osa03LNT0216500.1 | osa-miR5157b-3p | Cleavage | 4.0 | 19.084 | 1 | 24 |
| Osa03LNT0216500.1 | osa-miR1319a | Cleavage | 4.5 | 14.952 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0216500.1 | 3 | nan | Morphological trait | Root | RM338 | RZ284 |
| Osa03LNT0216500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0216500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0216500.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0216500.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0216500.1 | 3 | nan | Physiological trait | Eating quality | RZ574 | RZ284 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)