© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0217600.1
TATAAAGCATCACCACCAGGGCAGGGGTTGCCATTGTTATTCACAAACAAAAACAGAGTTTGGCAGTCCAAAGGCATACTTTTACAGGTTACATGACAACGGCTTATCAGTACTACAAATCACTGTGTAGCTGAGCAAACTGCAACATCTGTAACTTCTGTAGCTGTCACAAAAAACTACTGACAAAAACATGCAAGCATTTTTTTTTCTTTTTCACCCTAGAATGTGTAGTCACCGGAGTTGTCGTATCGTCGCGAAATGCTCTCGCCACCACTGAGGACTGACCCCATGCTTGACCTCTGCACGAGCCGGACTAAGGACTGGACGACCTCCGACATCGGTGGCCTGAATTCCGGCTCAGGCTGGACACAGAGCGCGATTGCGTCGGCGAATCGAGAGAGGGATTTTGCAGGGTACAGTCCTTCCAGTGCTGGATCTACCATCTGATCTAACGCATCGATGTCATGAAGCTGCGGAGAAGCCCATCGGACTAGCGACTGCTGTGGCCATGGTTGGGATCTGTCAAATGCTTTCCTGCCAGTCAGGAGCTCTAGCATGACGACTCCAAAACTGTACACATCACTCTTTTGAGAGTACTGTCCAGACATGGTCACCTCGGGAGCTCTATATCCTGAGTTCTCATCTGATTCCTGGAGTTCCTGGTTGGGAATAAGCTCTGCAAACCCACAATCTGAAACATGGGGGTTAAGCTCATTATCCAACAGTATGTTAGATGACTTGAAATTCTTGTGGATGATAGACGGTGAGCAAGTTTCGTGCATATACTCTAATGCCCTTGCAGATCCTAATGCAATCTTGACACGGCTATTCCAAGACAGTGGTTTGCTGTATCCATCAGACAGGTGAAGGAAGTCATGAAGAGAACCGTTTCTGTAAAATTCATATGCCAGCAAATACTGTCCATGCTCCAAGCAGTAGCCGTCAAGCTCTGAGAGGTTTGGATGGTTTAATTTTGAAATCTTTGCTACCAAATCAATAAAGAAATCGGATGGTTTGCTTGGAAAGGCAGATACATTGATTTTCTTCACAGCCAGTACCTTATGATCTGACTCATCTGAGATCTCTGCTCTGTAAACCCGGCCAAAAGAGCCTTCACCGATAAGATTGTCAGCACTGAAGCTCTCCGTTGCCATCTGCAGGTCTGCCACAGTGTACGCAGTTGCTCTGATGGAAGAAAGGTCTACATTCTTTGCCAAAACAGGCTTGTTTGTGAGATCATTTTCGTCAAAGGACTTGTGCAAATCGATTTTCGATGGCGGTTTCAGGTTCATTGAGACAGTCTTCTGCAATCCTTCCTTTGCAGTTGGTGATATGATGCTTATTGTTCTCAGCTGATTGAATTTTCCTGAAGCAATTGGTCTAAGAGTGAGAGGTTCATTCTTCTCAGGATCTCCTCCATGTTGATGCCTCGTTGACTTTCTCTTGAACACAAAGAATCCAACCATTGCTCCAAGAACCACCAAAGATATGACAATCCCAGCAACAGCCCCACCTCCTATCTTAGAACTTCTGCCTCCACCGTCACCGCCACTGCCATCGCCATTGCCACCGTTATCACCATTGCTTCCAATTGGTGGATTTCTGTTACGGTTACGAGGATTTCTGGTAGAAGGCTGTCGTGGCGGGGATTGTGAAGTAGTGGATGGTGGAGATGATGGTGCAGGACTGACTGGACTGTTGCTAAAGGAGTTCCCACTTATCTGCAGATTACTTATGCCTTTTAGCTTATCAGGAATTGCTCCACTTAATTGATTGTTTTGAACGTTGAGGTCAGTTAGAGGGAGATCAGATAGGACATCTATGGTACCGGTAAACCGATTATCCTGCAAATGAAGCATGGTCAGACTTGTCAAGTTGCTGAAGCTGTCTGGCAGAGTGCCAGAGAAGGTGTTGTCAGAGAGGTCCAATGTAGCCAAGTTGGTGAGTTGGTTGAACATAACATTGATGCTTGAAAGCTGATTATGTCCAAGATTTAGATACTTCAGTGAGGCCATTTGGGAAATGGAGTAAGGCAAAGTCCCAGTGAAGCTATTGTTCTCAAGATTTAGCCTCTCAAGATTTGGAGGGAGATTATAAGGGATATCACCTCCTCCAAGATTGTTATTGCTAGCATCAAGCTCAACCAGTGCAGTCATGACGTTCATGTTGTACCCCAAGGTCCCCTTGAGCCCCATACCGGGTAATTTTATTGTTATCACCCTTGATCCAGAGCAAGTGATCCCAAGCCAAGACTGGCCACAAGGGTCGCCGTTCTGCGCCACCCAGTTTGTCAGCTGCGAGGGCGAGTTCAGACTTGTGTAGAACGTGTTTAGGGCAGTCACGTCGTCTGAGCTAGTGTCGGCAGTGACCCCCAAGAACGCTGTGGCCATGAGCAGCATCGCCACCACTCCAGTGAAGCCCACCGACGCCATGCCCGAGCCTGAAGCTGCTCTGAACCAGCTCGAGCTCGGCTTCCCCATTGCGGTAATGCTTCTCTGCTTCTTGGAGAACTCCTCCAGGAAAGAAGGTGATGGACAGAAAATAAAAAAAAAATCCCCCCTTTTTGTTCACTTCCTGCTACTATACACAACAAAAGCTCATTCTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACTATATGTCAGCGAGCGAGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0217600.1 | 3 | 16073792 | T | G |
| Osa03LNT0217600.1 | 3 | 16074228 | G | A |
| Osa03LNT0217600.1 | 3 | 16074695 | T | C |
| Osa03LNT0217600.1 | 3 | 16075626 | C | T |
| Osa03LNT0217600.1 | 3 | 16075847 | C | T |
| Osa03LNT0217600.1 | 3 | 16076306 | T | A |
| Osa03LNT0217600.1 | 3 | 16076544 | A | G |
| Osa03LNT0217600.1 | 3 | 16076587 | C | A |
| Osa03LNT0217600.1 | 3 | 16076788 | T | G |
| Osa03LNT0217600.1 | 3 | 16077247 | G | A |
| Osa03LNT0217600.1 | 3 | 16078089 | A | C |
| Osa03LNT0217600.1 | 3 | 16077529 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0217600.1 | osa-miR5527 | Translation | 5.0 | 20.978 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR5529 | Cleavage | 5.0 | 18.453 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR5533 | Cleavage | 4.5 | 23.637 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR5533 | Translation | 5.0 | 22.461 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR5802 | Cleavage | 3.0 | 22.561 | 1 | 24 |
| Osa03LNT0217600.1 | osa-miR5802 | Cleavage | 5.0 | 16.469 | 1 | 24 |
| Osa03LNT0217600.1 | osa-miR5812 | Cleavage | 3.0 | 14.675 | 1 | 24 |
| Osa03LNT0217600.1 | osa-miR6252 | Translation | 5.0 | 11.589 | 1 | 23 |
| Osa03LNT0217600.1 | osa-miR156a | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156b-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156c-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156d | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156e | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156f-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156g-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156h-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156i | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR156j-5p | Cleavage | 5.0 | 6.429 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR166a-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166b-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166c-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166d-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166f | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR156l-5p | Cleavage | 5.0 | 6.429 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166g-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166h-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166i-3p | Translation | 5.0 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166m | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR166j-3p | Translation | 4.5 | 15.28 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR435 | Cleavage | 4.5 | 16.928 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR1869 | Cleavage | 3.5 | 15.659 | 1 | 24 |
| Osa03LNT0217600.1 | osa-miR1882e-3p | Cleavage | 4.5 | 20.879 | 1 | 24 |
| Osa03LNT0217600.1 | osa-miR2093-5p | Cleavage | 5.0 | 17.671 | 1 | 20 |
| Osa03LNT0217600.1 | osa-miR2095-5p | Cleavage | 4.0 | 15.623 | 1 | 22 |
| Osa03LNT0217600.1 | osa-miR5071 | Cleavage | 5.0 | 18.011 | 1 | 21 |
| Osa03LNT0217600.1 | osa-miR5072 | Translation | 4.5 | 24.995 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0217600.1 | 3 | nan | Morphological trait | Panicle/flower | RZ452 | RZ284 |
| Osa03LNT0217600.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0217600.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217600.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0217600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217600.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0217600.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0217600.1 | 3 | qGL3-1 | Physiological trait | Eating quality | nan | nan |
| Osa03LNT0217600.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)