© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0221500.1
CGGCTCGATATAAATGGCAACAACAATAGGGTGACGGATCTCAGCGAACCGAGGTCTTGCCGGCGAGATGGAGCAATGCCTGCTTGTGGTAGGCAGTTCGGAGCTTCTTGTGCTTCTGCACAAAGGTAGGGAGGTCAATGTCCTTCTCCAGGAACTTCTGATGCAGCTCCTCAGACTCCTCATCTAACTTCGCCATCAATTTTTGGAGCTTGTCGAGCAGTGCAGCAGGGGAATACGACTTCATAACCTCATCCCTTTGCCTTTCTAAATCAGCCAACCTATCCTGAGCAGCAGCTAGTTCTGTAGTTCTTATAATAGTGCACTGATTCCTAATCTCCGAGATCCGCTGTTCCTTTTCCAAATTATCCCTTGCAAGTTGCACTGTCTCCTTTTTAAGCTCATCCCGCAAATTGTTCTGGGTTTTAACTTGATCGAGTGAATTGAAGAAAGCACTGTATGCCTCTTTGTCTTTCAACAGTCTCTGCAAGTCATCAACACTTTTGTCCTTTAAGCGAGCAATTATCCCTGCAGCCTCAGCTGGAGATGGCTGACCATGCAATGATTGGGGATTATCAGAAGCTCTTTGATGTGGACTACCACTGGACGAGCTGGGCAGGGATGGATGTGAAGATGAACCAAGGACAGACGGAGGGTACCATGGTTGTGTAGGGTTGTCCTGGAAATTTGTATCAGGTTGCTGCTGCTGCGAGCTGCTGTTGTCAAGCATTCAGCAGGGCCAAAGAAGCAAGAGGAGCACATTTTTCAAGTGAGCGTAAAGGCAATCAGCAAATCATTTTAAATAGCCACGTTAATTTATTTATGATAATATTATAGTTCAATTAACTGAAGAGCCAACCGTAAGGAATGACAGGGTAGTAGATTGGTGACTCCGTTCGGATGACAAAGTAAACTTTTGGAACAAAAGCAAGCAAATCTCTGAGGATCAATATCTGAAGGCTTTTTAGAAAGGAACTAAAGATTATGAATCACATCAAGCCTGTTGGTTGGTACTGATAGACAAATAGCATTTTCTATTGAATAGAAATGGTAGCTCAATTGCTGAAACGCTCTGTGAGACTAGGTCAGGACTCAGAAATTAGAAAAGCAAACGACAAGCTTTCGGTGGCAATAACATACCCGAAAAGAGGAAATCTCCAGCTCATTGTACTGGAGCAATCTAGCTTCGAATGGGGGGAACTGGACCGGGGAGGACAGGAATCGGGGCTGAGACCTGGGTCAACCGGTTCCCTCGGCGTACGTGGGGATGGAACGAGAATAGGAGAGGAGTCCCGCCGCGCTGTGCAGCGCTGTCGCCGGTGGCCTCAACCCGCGGTGTGCCGCCGCCGCTGCGCTTCCGCGTGCGTGGGGGAGGAACGGGGCGGGGGCTCGGGACGTAGGGAGGGCCGGAGGGGAGACCGAAGCGAAAACCGCCTGAAATCCATTGCAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0221500.1 | 3 | 20842274 | G | A |
| Osa03LNT0221500.1 | 3 | 20842827 | A | G |
| Osa03LNT0221500.1 | 3 | 20844898 | T | G |
| Osa03LNT0221500.1 | 3 | 20845430 | A | G |
| Osa03LNT0221500.1 | 3 | 20845594 | T | C |
| Osa03LNT0221500.1 | 3 | 20845836 | A | C |
| Osa03LNT0221500.1 | 3 | 20846065 | G | A |
| Osa03LNT0221500.1 | 3 | 20846711 | G | A |
| Osa03LNT0221500.1 | 3 | 20846865 | A | G |
| Osa03LNT0221500.1 | 3 | 20844122 | T | C |
| Osa03LNT0221500.1 | 3 | 20842269 | A | G |
| Osa03LNT0221500.1 | 3 | 20843882 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0221500.1 | osa-miR5814 | Cleavage | 4.5 | 15.591 | 1 | 24 |
| Osa03LNT0221500.1 | osa-miR529b | Translation | 5.0 | 11.593 | 1 | 21 |
| Osa03LNT0221500.1 | osa-miR1847.1 | Cleavage | 4.5 | 24.23 | 1 | 21 |
| Osa03LNT0221500.1 | osa-miR2863b | Translation | 4.5 | 13.739 | 1 | 21 |
| Osa03LNT0221500.1 | osa-miR2931 | Cleavage | 4.5 | 17.067 | 1 | 20 |
| Osa03LNT0221500.1 | osa-miR444a-3p.1 | Translation | 4.5 | 10.098 | 1 | 21 |
| Osa03LNT0221500.1 | osa-miR444d.1 | Translation | 4.5 | 10.098 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0221500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221500.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221500.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221500.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0221500.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0221500.1 | 3 | qDLR3 | Resistance or Tolerance | Other soil stress tolerance | RM338 | RM2453 |
| Osa03LNT0221500.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0221500.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0221500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0221500.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0221500.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221500.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0221500.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221500.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0221500.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)