© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0221900.1
GCCAGAGCTAGCCAACGTGCTTATCCATACCACTATGCATGTCCTTATCCACTACACAGAGCCACACCCAGTCGATCCCCTCTCCCCCTTCTCTTGTTTCTCCCCAACCTTCTCTCCCCTCTTCGCGCTCCTTCCCCACTCCCTCGCTGCGCATCCTCCCCTTCCCTCTTCGTTCGCCACCCCTCCCCTCTCCCTCCCCTTCTCTTGCCGCCTCCCCTCTCCCTTCCCTACTCCCTTGCTGCCTCCCTCTCCCTTTCCTGTTCTTCCCTTTTCCTTCTTCCCTTCCGGCAGCGGTGGTTGGTGGAGGTGACCCCGCTGCCACCAAGCCGCTGGTCCGAAGGGGGTACTAGCGCCGGAGGAGCCGCGGCACCGGCCCCATCATCACTGGCCTTGTCTGCGCCTTCATGCCATGTGTTTTTGTGTGTTTCAAGATCGTGTTTTATATATATATATGGGGATGATGTTATTGGATGGGATCTCGGGTGGTTGTCAGGTGTTTTCGTGATTGTGCAACAGCCTCCATCGCTCGACACTTTTGCCGCCGGCCGCGAGCGCTGGTGCTCCGTGTATGTCTACCTCCACCGGCTGTCTTTTTTTTTTTTGTTTCATTGAAAACTATAGGTTCTGGTTGTTAGGCAAGAACTGGCCACTATAATCTCTATAAGTGTCGTGAACCGTCACCTTTGCCCTTGGGTATTGGTGTGGTGCCGTTAAATTGGTTCCGACTATAAAACCAACATCTATGGTCGGTTTCCAACCGGTGCCAATAGAGGGGTC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0221900.1 | 3 | 21288351 | T | C |
| Osa03LNT0221900.1 | 3 | 21288455 | A | G |
| Osa03LNT0221900.1 | 3 | 21288613 | T | C |
| Osa03LNT0221900.1 | 3 | 21288647 | A | G |
| Osa03LNT0221900.1 | 3 | 21288930 | A | C |
| Osa03LNT0221900.1 | 3 | 21289009 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0221900.1 | osa-miR5825 | Cleavage | 4.0 | 19.317 | 1 | 24 |
| Osa03LNT0221900.1 | osa-miR166b-5p | Translation | 5.0 | 9.341 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR166g-5p | Cleavage | 4.5 | 15.731 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR166h-5p | Cleavage | 5.0 | 9.341 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR528-5p | Translation | 4.0 | 6.941 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR1858a | Translation | 4.0 | 1.199 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR1858a | Translation | 5.0 | 3.771 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR1858b | Translation | 4.0 | 1.199 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR1858b | Translation | 5.0 | 3.771 | 1 | 21 |
| Osa03LNT0221900.1 | osa-miR2868 | Cleavage | 4.0 | 9.253 | 1 | 20 |
| Osa03LNT0221900.1 | osa-miR2919 | Cleavage | 3.0 | 3.909 | 1 | 19 |
| Osa03LNT0221900.1 | osa-miR2919 | Cleavage | 5.0 | 17.058 | 1 | 19 |
| Osa03LNT0221900.1 | osa-miR2919 | Cleavage | 4.0 | 4.779 | 1 | 19 |
| Osa03LNT0221900.1 | osa-miR5522 | Cleavage | 4.5 | 3.939 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0221900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0221900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0221900.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0221900.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0221900.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0221900.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0221900.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Osa03LNT0221900.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221900.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0221900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0221900.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221900.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0221900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0221900.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)