© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0222300.1
GATGCATGTTTACTCCTTTTCTGTACCAGCCAGATAACTGTCAAACAATCAATTCAGGCATTTTGCATAAAAAAGCTATCTTCTCCTTTGAAGCTAATGTCTGTATGAACTATGAACATAGCGCAACAGTTCTGAGTCAAAGTCATTATCTACAACATTATCTTCACAAGATGAATGGACCACGGTTTATCAGAGATCTGTGTGAAGTAAGAACAGAGCAAAGGATCACTGATCGACCATAAGTGAATCAGCCTATCAAAGATCAGAGCTACAAAACTGATTGCCATTTGATTTCTATTTCCTTCACAGTAAGCAGTCAAGAAGAATCAATTGGATTTCCAACAGGTAGTGACTGCTATGATAATAGGAGTTAATCTGTAGTAAGGAATCTATCTTGCCTTTGAATCAAAAAATAACATCCGTGATTGTAGTTAGCCTCATTCCTGTACCTCCAACCAAGGTGGATGGTCCTCCACCTTGGTCTGTGGAGGAAGGGGCTTCCAGCCTGGTTTCTCATCCCAGTACATGTCATAATATATGTGCCCTATTTCACGGAGCTGCACACAGCACCATAGGCCCACATATCTCTTTACTCGATTCCGAAATTTCGTGTCCACAGCTGCATCAGAAAAACCTCCGAAGGCGTTAACCATAGATGAGAACTGTAAGATTTTGATATCCTTATATGGTTTGAATATATCCAAAAGCGTTTGTTCTGTGCTATTCCTTGGTAAGAGAACAGGCGCGCCTTTATTGGTTCTATTAGTTGTTGAGCATCTGGTGCTATGCTCATTGCAGAGCTCAACCTCAAGAAATGATTCTTTGACCTGTTTAGGCAATGATGGATTCTCAAGAAACGAGTATTCTCTAAAATCAATGTGTGGGCCAAACTCCTCCTTAGGTAAGTCCTTTAGCATAACATGTACCTCAAAAACATGATCCATTGGACAGAGGAAAGGTTGTCTGGTCATTGTTCCTTCCAAAACTCCAGGATGTCCAAACCACATCCTATCAAGCCTGCACCATAATGGAGGCATTACCAGGGTCCTCTTTAATAGGGAAGCAATAGCGAGTGCAGTTCTTATTTGCTTCAACTGGTAATTGACCAATGCAAAATGAGATTTAACAGTATGAGCGCCATCTAACAGCAAGCTTTTAGGAATGTTGGGTCTAAATGATAGGAAACCTCCTGGTGAGTCATAGTATGATGGCTGATCAAAGAAAAGCATTGCTTCACGCAATCTATGACGCTTTCCCACAGTACCTGCATACTGGAAAGTAGTATGCACAGCATATGGTTCTAGCCGAAGCTGCTGATACATGCCCTGCACAAAATATGTATGACCACTACAGAATATACTTGCTGGTAGGACTCCAAGCTTCAGTTTCCCATCATAAGAATATACAAGTTCATCTTCTCCAACAACCGGGTATCCAAATTTTTTGTGTATAAGGTCATTAAAAGCATTCTGGTCCCACAACGTATCATCAGATAAGAGTAAGTCTTTCCAATCTTTTGCCAGCCTCTTAGCTGGTTCAGTGGGTCGCCAATGGAAAATACCGATATTGTATGCACCAGTAACTTCCCTCCAGTTCTCCAGGCTGTCATCGGTGACCGTGGGAATGACCTGGTCGCTGGACGTGAGGAGATCCGCGTCAGGGTAGCGGGCGAGGTAGGGCAGCGGGTTCTTGAGCCACACCATGTCCGTGTCGCACATGAGCAGCTCGTAGCCGAAGGGCAGGAGCGCGTTGATGAGCAGCACCTTCTCCCTGCCCATCTTGTGGAAGGTGGGCGAGCCCCAGACGGCGTCCTCGGTGGCCATCCTGCTGCCCATGTCGAAGACGGGGACGCCCCTGAGGTAGAGCTCCCGGAGCAGCTTGGTGTCCATGGCGCCGACGAGGAGGCTGTCGACGCCGAGGTCCGTGAGGTGGCGCACCCAGGTGAGGATGAAGTCGAGGAAGGCGTGGTTGCCGAAGGTGACGACAATGGCGCCGCCGCGGGCGCGGGCGCCCACCATCTCGCGGGTGAGGCGGAACGCGCGCGGCGCGGGCATCCGCTCCCTCCGCGGCGGGGGCTTCCAGATGGGCCGATTGTACATGGTCTCCGGCTGCGCCACACCGGAGACTGCGCCCGAGAGGTTGGCGGCGGCGGCGGACGCGGGAGGGATGGGGAGCGGGGGCGCGGCGAGCGAGGAGAAGGAGGAGAGGAGGAAGAAGAGCGCGGAGACGGCGAACCCGCCGATGACGGCGCCGTAGATCCCGACGAAGACCGGCTTGGTCGAGTCGGCGGGGCACCACGGCGCCATCTCGCCGGCCGGCGGCGGCGGATCGTGGTCGCCGGAGAGGCAAGGTCAGCGGCTCACCGCTGCCATT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0222300.1 | 3 | 21623671 | T | C |
| Osa03LNT0222300.1 | 3 | 21623979 | T | C |
| Osa03LNT0222300.1 | 3 | 21624241 | A | G |
| Osa03LNT0222300.1 | 3 | 21624378 | T | C |
| Osa03LNT0222300.1 | 3 | 21625007 | C | T |
| Osa03LNT0222300.1 | 3 | 21626168 | A | G |
| Osa03LNT0222300.1 | 3 | 21626562 | T | C |
| Osa03LNT0222300.1 | 3 | 21627011 | G | A |
| Osa03LNT0222300.1 | 3 | 21627413 | G | A |
| Osa03LNT0222300.1 | 3 | 21627675 | A | G |
| Osa03LNT0222300.1 | 3 | 21628029 | A | T |
| Osa03LNT0222300.1 | 3 | 21628114 | T | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0222300.1 | osa-miR5537 | Translation | 4.0 | 11.594 | 1 | 22 |
| Osa03LNT0222300.1 | osa-miR167d-3p | Cleavage | 5.0 | 16.565 | 1 | 22 |
| Osa03LNT0222300.1 | osa-miR5500 | Cleavage | 5.0 | 23.348 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0222300.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0222300.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0222300.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0222300.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Osa03LNT0222300.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222300.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222300.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222300.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222300.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222300.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0222300.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0222300.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)