© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0222400.1
AATTCTAGACAATTCATTCAACATAGGAATAAATGTTTTTTCAAGAAGGTCCTCAGACCTACCCCGTAGCTTATATTGAAAGCCACAACGACAGGTTCGCTGGGATTACAAGGTTTACATGAGCTCAGAGCAAAAGGGAAGTCTCACATGGTCACACATCCCGACCAGCTAGGGTCACTTAAAGGATAGACAAACTAAACAAAAAGGGGTAAGAACTCCCATAGCAGAAATTGACAACTCTTACTTTAACACGGACTTCAAACTTTTTTTGGTAGGAAAAACATCATCCAACTCTTGATCTTGGTCGCAGCCTTGCTATTGCCCCTTCAGACGTGCCACCAGAGCCTCCATCTGCTTCTCCTTGGGGAAGGAGAGGTTTCCAAGCAATTCACACAAAATGAATACAATTTCCTCTTTTAGACTCCAAAAATTCTTAATGCTTTTTCTGCACTTCACGTTTGCTCAATCTTTCAACACACAAGCTCTTTGAACATGGCTCTGAAGCTGAAGCACTCACTTCGCTGTCCTGAGTCAACTGCTTCTGAAATTCATCCTCCGTCACTGCAGAGAAGGGCAGTACCACCTGAATAGTTGGAGTTGGCAAATCACCTTTTTTCGAGGCCAAGTTATACTGGCCGCCGCAGCTGCCGTTCTCCTTCTTAGGAAGGTTGAACCCAGTATCACACTGAACTCCTGAACATGACAAGGTCATCCATCGTGTAGATGCGCTAGATCCGGCAACATCGCCATATACTGCAAGTACCAAGTAGAGAGGGCGGGGCCATGGCGGTGTCCAAGCAATGTGCCATCACCACCGACCTTGCATTCACACGCAAGCACCACCTCCTCTACCTGACGTGGCGGCGTGCACTGTGGGAGTCGAACTCATGAGGTGCCTGAGGTGTTGAGGGATGGCCTTGGTTCCTCCTCCACCTGACGTGACGTGGTACCGTAGGCGGTGGGACAGCTGTAGCAGTGCATATACACTGGATCTCCTCTTCTCCACTGCCCGACGACGGCAGTGAGGCGAAGACTTTGATCCAAGGACGACGGCTCTCGATCCAAATCCAACAGCGCCTGCGTGCAGGGAAGGGGAGCTGGCGACGGACGCCGCTGCGGGATACGGGTGGTGGAAGGCGACAACGGCGGGGGAAGGGCGAGGGCATGAGGGGCTGAGGGGATGATATACTTGCCTTGGCAGTTATTGCGACGATGCGGGGATTGCGCCATCAAGGAGGCGAGATTGACGATGGCGATGGGGATGAGAATGGGGATGGGGCTTTGGGTGGATGATGCAGCGATGGATTTCTGGCCGATGATTTCACCGAGCCGATTGACGGATGGAGAAGTGGTGGATCGAGGCGGAGCGAGTAGAAGCGGCGCGTGTTGGCGGCGGCGGCGGCGACGCCGGAAGGGGACGACCCTCCGAAGGCGGCGAACGGGGAATGCGAGGAGGAAGAGGGCGGAGGAGGAGGAGCGCCGGCGGGAGCAGCGGTGGGGCGAGGAGAATCGGCGCGTGATGGCAGCGGCAGCAAAAGCGCTGGGGAGGAGCGCGAGTCCCGCGTGTTCAGCGCACGCTCATCGCGCGAGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0222400.1 | 3 | 21632537 | A | C |
| Osa03LNT0222400.1 | 3 | 21632932 | T | C |
| Osa03LNT0222400.1 | 3 | 21633393 | A | G |
| Osa03LNT0222400.1 | 3 | 21633482 | T | G |
| Osa03LNT0222400.1 | 3 | 21633860 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0222400.1 | osa-miR812t | Cleavage | 4.0 | 17.324 | 1 | 24 |
| Osa03LNT0222400.1 | osa-miR812u | Cleavage | 4.0 | 17.324 | 1 | 24 |
| Osa03LNT0222400.1 | osa-miR156c-3p | Cleavage | 5.0 | 19.036 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR156f-3p | Cleavage | 5.0 | 19.036 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR156g-3p | Cleavage | 5.0 | 19.036 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR156h-3p | Cleavage | 5.0 | 19.036 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR395f | Cleavage | 5.0 | 19.945 | 1 | 21 |
| Osa03LNT0222400.1 | osa-miR396a-3p | Cleavage | 5.0 | 14.252 | 1 | 20 |
| Osa03LNT0222400.1 | osa-miR396b-3p | Cleavage | 5.0 | 14.252 | 1 | 20 |
| Osa03LNT0222400.1 | osa-miR156l-3p | Cleavage | 5.0 | 19.036 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR414 | Cleavage | 2.0 | 12.851 | 1 | 21 |
| Osa03LNT0222400.1 | osa-miR426 | Cleavage | 5.0 | 20.164 | 1 | 21 |
| Osa03LNT0222400.1 | osa-miR395w | Cleavage | 5.0 | 19.945 | 1 | 22 |
| Osa03LNT0222400.1 | osa-miR2864.1 | Translation | 4.5 | 21.91 | 1 | 21 |
| Osa03LNT0222400.1 | osa-miR812n-3p | Cleavage | 4.0 | 17.324 | 1 | 24 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0222400.1 | 3 | qGL-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222400.1 | 3 | qLWR-3 | Morphological trait | Seed | R19 | C1677 |
| Osa03LNT0222400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0222400.1 | 3 | ccf3b | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222400.1 | 3 | ccfs3 | Physiological trait | Source activity | RM16 | RM282 |
| Osa03LNT0222400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222400.1 | 3 | nan | Resistance or Tolerance | Other stress resistance | RM4512 | RM8208 |
| Osa03LNT0222400.1 | 3 | sho2 | Morphological trait | Dwarf | nan | nan |
| Osa03LNT0222400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ284 | RZ403 |
| Osa03LNT0222400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0222400.1 | 3 | An5(t) | Morphological trait | Panicle/flower | C1677 | R19 |
| Osa03LNT0222400.1 | 3 | nan | Morphological trait | Panicle/flower | RZ403 | RZ452 |
| Osa03LNT0222400.1 | 3 | gw3.1 | Morphological trait | Seed | RZ672 | RZ474 |
| Osa03LNT0222400.1 | 3 | qGW-3 | Morphological trait | Seed | G332 | C80 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)