© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0227800.2
AGCCATGCACTAATCAACTTTACTAACATTATAGCGTCAATGGCCATGGCGCTACGCCAACTTCACAAAACTATTAACACATTGGCTCATGTTACAAGCTGTAACACAACGCATGACTCGCTGAGACTTTCCTGGAGAGTGGAGAGGACGAGGACACAAACTCAGTCAAGTCAATCAAAAGCAATTAACTACTCAACGATCTCTGTGTGCCCACCATAAGTAGAACGCTTTCTCACGAGCCAATGGCAGGCTAATGTGTCAATGGTGTCAGAGGTGAATCATGGATCGCCGCTTCAGTCATGCTATTCAACAGTGGACATGTACTTACAAGGTCTCGCCTTCGCATGTTGATCTTGCTGCTCCGTTCACAGAAGTGCGAATGACAGCAGATTACCGTGCTATCATCTGGAGAATATTGCGGCCAGGCAAACAGGTAACTGATGTGCAAATGAGACGAAATGTTGGAAAGACCTTAACTTGGAGCAGGTTTTTTTCTGCTTCTTCTTGAATCACTGGACTTGCGCTCAGCACCAATCTGTACCTGCTGAGCTTTAGGCCTTCTAGTTTTCGTTTGGCTAGGTTCAGTTGTAGGGGACGTGGATGATCGTTGGGTTGTTCTAGATCCTGGACGTTTCGCATTATCCCCCTTCAGCTTCTCTCTTGCTGGTCTGGCATTAGAAAGCCTCTGTGGTTTCTGCGTTGCTGCACCCTGTTTACCACCCACCTGTACTAACCTTTGTTGGTTCTGGCTCTGATTATTACTGCCTTCATACTCCCCACAACCAACTGATGTTGAAACCTCCTTATTTTGAGCCAGCAAGGGGTCGACACCTTGAACTTGGTCCTCATCAGAATCATCCATTTCCTCACGTTCAAATTCGACATGCTGGCTATCTTCCTCTGAATCACTTAATTCTTCTTGTTCCATTACAATGCCTTGCATTGATTCTTCATTAGGCTCTTCAATGCCATGATGGGAACAAACATTTCCATCCTCCAGCTCTGAAACACTAGCTTTGTCCTTCCTAGACACCTCTGCCCTATCATTCAATTTGCTACTGGTACCTCCGGTATCATTTCCATTCATGTAGTCCCTTGAAGAACATAAATGAATATCCAAGTCAATATTATTTTCCTTCTCACAAGGGCCTGTGGATTTTTTCCTAGCTGTTGACTGATCATCTGCTGGGGCTTCCCTCATGTTACACTCAGATTGATTATAAGGGCGATTGCAGTCATCTCCTGGTACTTCACCATGCATATCAACTTCAGTTCTTTGCAGGAGAGGATGGAAATCAATAGTATTAGCATTTACAGGAGTTCTCGTCTCAATGCAATCTGTAGTCTGATTGTTACTTTTCTCGGTTTGGACTTTCTCAAAGGGGAAAAGATCCCTTGAATGATTGATAAGGTTTTGAACCGGATGATTATATGATGAAAGCACCTCTCTTGGGTACTGAAAAAGCAAAGGATGCATCTGAAAATCTTGCTCAGCACCATCTTCTGTCGTATTTCCATTAGAAATCCCACTCTGATGTAATCTAACATTAGTACTATGATCAGGGAACAGATTTAGTTGTCTATAAACACTTTCTGAAAAGGTTGGAGGTGGTACAGGAAAAAGATCCTTTGCCGCATTATCTGAGGTGCCATTGAGTTGTGTTGCATTCTGATGGAATGCCACCTGAGATATCACACGGACAGAAGGAGGAAGGTTTACAGGAGGCAAATCTGGGGCTAACTTGACCACACAGCTACCTTTCTCTTTTGAAAATTGCGAAGCCTGCGGTTGGTCCAAAGAGCCACCTTGTACCTTTCGCTTAGATGAAAGGCCATCAGAAGTGCAAGAACTAAAAGGGAAATATGAAGCTGTCACATCAAAATTTGTGCTGTTTCCTTTCTGCTGTTCAGCAGAGTCACCTGCAACACCAGATTCTTCACAGAGGCTGCTGCCTGACTGCATCATCATGCCATTTCCAGCATTTCTTGGTAATGACAGCTGATAAGGCTGATAGTTTATGCTCCTATTCTCTGTGTCTGCCAAAAATGCTTCATTGACATACAAATCATCATCATCATTTTCAGCACCCTCGGAGCCATTGTTGTCAGCCTCCTGCCCATGAACCGCTTGTGAATTAGGCATTGAAGCTTTAAGTTTTCTCCTCTTAGCCTCATATGATCGCCTTTTTTCTTTTTCGGCTTCACTTTTATTGTAGGATTTCTGGACGCCAGTGGCAGACCTCCATTGGCGTGGGAGCAGTGAAGGATCTCTATGTGGCACAACGAACCTCCAAACCAATGCCCAATCATTTTTGAATGCCTTGAGTCCCTCCTGGATACGCTGTTGTTCTTCATTTGTCAATGGAGAGGTCTTCATACGGCGAACGTCCTTAATTGGATTGTCAGGAGCTTTGGAGGAGCTGCGGTTCTTTTGTCTCACAAATATCTGATGCTTCGATTTACATGGAAGAAATCGTTTTTGTATTGCTCCCCAGTCGTTATTGTATTCCAAAAGTCCAAGAGCTAATAATCCATCCTCCGCATCAGTGAAGAGCACTCTATTGGCCATAGCTGTAGGAGGTGGCTTATGAGGAAATAGTGAAGAATTGAAAAGTGGGAAGAATCTCTCTGCTAATCTTGCAATATCAGATGGAACAAGGGCAACAGACTCCTTTTTTGTATTCTCAACAAGGGTAGCAGCTAATGTTTTCTTCTGCTGTGACTTCCCAGATGTATCTGGTGATGAGGACACACTATTTGATCTGCCTTGAGAAACTTTGTTGGCATCTTTACAAGTGTTAAATACTGTTGTAGGAAAAAGAGGCTCTTTCTTAAAGCGATTTTTGTCAGCAGTGCCATCTACATGGCTTTTCCTATACTTCACAACAGCGTCTGAAACATCCTTTAAATAACCAAGGGCCAAATGAAGTGGTGAGACATCCAGGATGGACATGACAGGACTCTTAATTAATGGCATCCATTGGTATTGTAAGGTCTCAGAAGAAGAAAAACCAAATGAAGAGCGTAGATGCTGTGGTTCAAAACAGAATTGCCGGTGAATAGTGCTTCTACTGGCCAGTGCTCGATCACAACAGCCAACCAACTCAACTATCATCTTTTTAACATCAGTAGCTAGTTGTTGTTTAGATGGGTCAAGAACACATAAAGAGAAGGTTTGAATCAGGAGCTGAACATGCTCGTATATCAACATATGCAGTCGACCAAGCTGCTGGTCACTAAATCCATTTGCTAAAGCAGCACCATTTACTGGCATCAATGACGAAGGGATGAAGGTACTCTGTGAAGGATACTGCCACCCATAAGGTTGGCCAGAAGCAAGCAGTTCAGGCGAGATATATGGCAGAATTGGTCGTAAAGAAGATTTGGTCGATCCATAATGTTCATTGGCTGCTCCTGACAACTCTGTGCACGGTCTATTTTTCCTGGTCTGACGCCTACGGCCGTCTTTCTCTTTCATAATATTTGTGTCTTCATAGTTCTCGGCATTTTCATCACCATCGCTTTCTAGGGCCTCCTCAATTTCGAGCTCAAAATCAGCATCATTCTCATCTTCATCTTGGTTTTCATCTCCCTGACATGCCTGTGTGCCATCATCTCCACCAGATAGGACAGCTGCAAGAAACTTACGATATTCCTCTTCCTCATCAACATTCTGCAGGTCACCATCATCATCTGATTCTTGGAGAAAGGTCTCTAACTCCTCTAGTGATTTATTCGCTAGAGAGTATCTTGCTCGAGTCCGCCGGCAGATCGCATCTTCCTCACTACCTTCAAGCAAGAGGTTATGAGAATCCTTTAATGAAGGAGAGCAAGCAACTTCACTTGGTAAGGCCTCTTGTTCCAATCCATTCAAGCAACCATCCCCATTCTCACAAGGAACCTCACTACTTCTTTGATCATCAAAACTAGTCTCCTCGCATTCTGCCTCTGAGGTAAGGCTCGATGAGGTCTCAGATGGAGAACCTTCTCTGAGAAAAGGGTTGAAATCCATGTCATCCTCCTCCACATCATCATCAACTTCCATAATAAATGTTGCAAGGGTAGTTCAAAGTGTCAAATTGACTACACCTTGGATGCTACCTCGACGACGAGCGCCAAAGCGGATCGAGGCCGTCCGCGGCGTCCGCGGGGCACAGCTGCCTCCCGAACGCCCGCTGCTTCTTCTTACAAGTCCCTGCGCCGCTCGCCGCCCTCCGCGCGCCTCGCCGTCCGCTCCTTCCCGCGGAAGGGGCTAGGGTTCGCCGCTGCTGCCGCCTCCGCCACGGCTAGGGAGAGGGCCGCCGCTCGCGGCCGGAGTGACGAGGAGAGCAGCGCCGCGCCGCGCCGCCGGCAGAGCCTAGGGTAAACCCTAGTTTTTTGACGAGAGGGAGAAAGTGAGACGGGGAGGGAGCGATTCCCATCCCCTCGAGTTGCACGCGCGGGTGCGCATCGGTCGGTCGAGCCAGCCGAGCAGCCCAGTGGGAATCGCCC
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0227800.2 | 3 | 26554861 | C | A |
| Osa03LNT0227800.2 | 3 | 26548712 | A | G |
| Osa03LNT0227800.2 | 3 | 26547377 | A | T |
| Osa03LNT0227800.2 | 3 | 26548466 | G | A |
| Osa03LNT0227800.2 | 3 | 26549233 | T | C |
| Osa03LNT0227800.2 | 3 | 26549608 | C | T |
| Osa03LNT0227800.2 | 3 | 26549737 | C | G |
| Osa03LNT0227800.2 | 3 | 26549952 | A | T |
| Osa03LNT0227800.2 | 3 | 26550433 | T | C |
| Osa03LNT0227800.2 | 3 | 26551472 | C | T |
| Osa03LNT0227800.2 | 3 | 26551491 | G | A |
| Osa03LNT0227800.2 | 3 | 26552133 | T | C |
| Osa03LNT0227800.2 | 3 | 26555941 | A | C |
| Osa03LNT0227800.2 | 3 | 26552577 | T | C |
| Osa03LNT0227800.2 | 3 | 26553161 | A | T |
| Osa03LNT0227800.2 | 3 | 26553332 | G | T |
| Osa03LNT0227800.2 | 3 | 26553799 | C | A |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0227800.2 | osa-miR5792 | Cleavage | 4.5 | 16.097 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR5797 | Cleavage | 4.0 | 10.16 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR5824 | Translation | 4.0 | 18.232 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR5826 | Translation | 4.5 | 22.364 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR5826 | Translation | 5.0 | 8.929 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR5837.2 | Cleavage | 3.5 | 16.283 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR6250 | Translation | 4.0 | 16.675 | 1 | 22 |
| Osa03LNT0227800.2 | osa-miR390-5p | Translation | 4.5 | 16.55 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR390-5p | Translation | 4.5 | 23.537 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR810a | Cleavage | 5.0 | 21.136 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR1426 | Cleavage | 4.5 | 14.517 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR1860-5p | Translation | 4.0 | 17.718 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR1874-3p | Cleavage | 4.0 | 16.908 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR1882e-3p | Translation | 5.0 | 14.33 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR2092-5p | Translation | 4.5 | 19.204 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR2864.1 | Cleavage | 4.5 | 14.094 | 1 | 21 |
| Osa03LNT0227800.2 | osa-miR2878-3p | Translation | 4.0 | 16.753 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR2878-3p | Translation | 5.0 | 13.029 | 1 | 24 |
| Osa03LNT0227800.2 | osa-miR5338 | Cleavage | 4.5 | 15.972 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0227800.2 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0227800.2 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227800.2 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0227800.2 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0227800.2 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0227800.2 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0227800.2 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0227800.2 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0227800.2 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)