© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0228400.1
GAAAACGAAAGACAGAGACGACACATTAATACAAACTGTACAAGGATCAGTTGGTACAACTTTACAGGCGTAGTAGTTAGGAAGGGACACTAAGCACCATCAGACAACTCCCCTTCAGAAGCAGCTCCAAAGCCGGAAGTACATGACAGTCTGCTTGATGTGCTATCTTAGATGTCATGAGAATGAGGGGTTTACACAACAGGCACCAATCAGGCTCTTTATGTTAATTACAATTACATTTACATGTGCTGGCAAGCAAGAATTGTACACTTGAGGAGAATCAGTATACTTTGGTCAGGAAAAAGACCTTCTATTGTGATGTTTAGCTGTATAGCCTGTAGGCAAAGAATCCAGAATCTTTTGGTTTCAATCATGACAGGTTAAACATAAACTTATTGTGACTGCGCCTTTGGCGCTCCTATCTCGGCTTCATTTGCCGGAGTGCTGTCGCCCATGACTTCGCCATGGCTTGCGGTAATGTTTTCAGGGTTTGGTACCACCAATTCCTTGTTGTCGATTCCACTCGGAGAGACAGCTGCATTGCTCTGCTCAGTTGCAACCACAGAAGATTCAACTTTTGCCTTGGGGCAATTTCTCAGGGTACCCTGCAGATACCAATTAGGCAATTACCAGACACAGGGACTAGTGCCAGCAAAGGCAAATTGCAAACATCAGAATAAGAAGTCACATAGTGATGTTTGAGATATGTTCCTTGCACAGAGAATCAGTCAACAATAACATGAAACAAGCGGCTTAATTAACAACAATGGTAGGCTCTCTTTACTTTTATTTTTTTCGTATACCCCCTAATTTCCAAAATGACCATACCCGCAATTCTGACATATAGCTATTGAAGTCAACGGCGTACCTAGAAAGCCAACGAAAAATAAAAGAAAAGGTACAATATGACAGATATAACCATGTGTCCATGTCTTCATAATATGGTTCAAAAACCATGACTCTTTTTACCCTAGTTGGTACTGCATATACACCATTGCTGCAAGTGCATTATCAACCGCATAAGATAGCAAAACAGGGCCACTGCCTTAACATGCCCTGTACTGTAACGCCATAACAAGAGGCATGCATGCCATGAAGAATGTTTTTGCCAGTTGAACCAAGCAATGTAATTATGCAATCCACCTCCACGAGAATATTACTGTATTCTAATGCTATCAATTTATGAAATGGGATAGGTGTCCTCAAAACAAAGATGAAGAGAAGCCCATTAGTTATCAGAAAGAAAGATAAACAATAAACTAGCTCATTAATACATGCAACAATACCTTGTTAGCCCACATCAGTCCGCAGGCGTTGCACAGAGTCCTTGGACCAGCTGGACCACGGCGCATTGCCGGTGTCATTTTTTCACTAGTGCCACAATTCTGACACTTTGATTCTCGAGATAGAAAATCTTGGCCTGAACCCTGGGAAGCAAGTTCACAGCCTGGAGATAGGGACTCTCCCTCCATATTTGCTCTTCCGGCAAATTGACCCTTCCTACGTTGCATCCTGAGTGCCACTTCTTTGCGTACGGCGTAACGTATTTTTTTATCGAAATTTCTTTCCTTCCGCTTTTCACGGAACCTAATGAGTGAAGCAACCCTTTTGGCAGGAATGTCTGTTCTCTGAAGTAAATCATCATAACCTCTGTTCTCACGTTGATTTGGTAAAACCATGTTAGCTAAACCTGGTGGCATTTCACTTCTTCCTAACAATAACAGAACAGCTTGAACCTTCTCAGGCGTCACGGATTCGAACACGTAGACCTCGCCCTGGAACAGCAGCGTCAGCTGGTTCGGGCTCCCCGGCAACAACGCCGAGACCGGCTCCGGGGCCGCCGGATCCTCGGCCGGCGGCAGCTCCTCTTCATCGCCCTCCTCGTCGTCATCCTCCTCCTCGTCCTCTTCTGTGCCGTCATCCCCGTCGTCGTCGTCGTTGTCGCCGCCGCCTGCTGCTGCGTCGGCGGGTGCGTCGCGCATCACGGCGTCGGCGTCCTGGGCGGCGGCGGCGGCGGCCGCCGCGTCGGGCATGGCCGGCGGTGGCGAGGTGGGGCCGTGGGGGGAGGGGGACTCAACTCGACTCAACTGAAACCCTAGATGTGGAAATGGAAGGCGGTGATGCGGCGCTGCGGCTGTGCACTTGGTACTGGGTGT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0228400.1 | 3 | 27270244 | A | G |
| Osa03LNT0228400.1 | 3 | 27271413 | G | A |
| Osa03LNT0228400.1 | 3 | 27272447 | A | G |
| Osa03LNT0228400.1 | 3 | 27272996 | T | C |
| Osa03LNT0228400.1 | 3 | 27273897 | T | C |
| Osa03LNT0228400.1 | 3 | 27272061 | A | C |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0228400.1 | osa-miR2873c | Cleavage | 3.0 | 24.79 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR171f-5p | Cleavage | 5.0 | 15.154 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR393b-3p | Translation | 4.5 | 20.394 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR1423-3p | Translation | 5.0 | 22.283 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR1430 | Cleavage | 4.5 | 15.669 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR1847.1 | Translation | 4.5 | 18.82 | 1 | 21 |
| Osa03LNT0228400.1 | osa-miR1851 | Cleavage | 4.5 | 20.601 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0228400.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0228400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228400.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0228400.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Osa03LNT0228400.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0228400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0228400.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0228400.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0228400.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)