© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0229100.1
AAGGAACTCATGCCTCAGGTCTGGGGCTTCCCTGTAATTCCCGTTAAGAAAAAAAAAAGGTATTTACATGCGCAAACTCCTGTAAAGAAAAATGAATCCTATAAAATCGTTGTGTAAACATAATCAGATGTTTTCTCGTGGTATGCACGGATGATGGGTATAAACATCTAAACATTTCTACGAGTTACAACTTACAATCACCTAACTAGTATCCAAGGTATGGGGCAAATCACCTAATTAGCCACTACATGAGGATAGCTCATTGCTACCCTTTCTGTCGCATAGGATTGCAGAATCCAATTCATGTTGCATCAGCCAGAGTCCAGGGCCGCCTTGTTCGAGGAGCTAAACATGCCCCAGGATGCAGTGACAGGTTAGCTGCTTGCGGTCAAAATTATCTTGAGAGATTATGGTCACATGTATTTACTCCTCAACCACAATACTATCAAGAAGAGGATGCCCCAGATGTGTGCTGCCACTGAGCATTTTGCCATTCAGCTGACCCCTTACACTAGTCGACTGGAGCTCAGTTGTCACATTATTGCCGTTCTCCTCAAGTAAAAGATCTTGTCTTGTTATTAATCCAACAACACGAGAAGGCCGTGGAACAACAAATATATGTCGCAATCCTAGTTGGCGGAAGAGATTGTACACCTTTGCTAAGGACATGTCCTCTGGCACTATATAAGGAGAAGGATTTAGAAATGGGGCGAGATCCAAATACAGCCCTAGCTCATCTTCTGTCAAATGAATATCATCAATTGACTTTCCTTTACTCGATGCTGGTTTAACAAAGTCACTTGTATTGTGCCTGTTGAGTATACCAGGTCCACAAGGGAAAGGACTATTCTGGAAATCTACTTTAGATTGCAGAAGTACAAGTAAGTGACTACGAAGTATCAGACCTATGACAAGTGACTCGCCATTCTGCCCACGATCAACAACAGGGAAGCCATTATGCTTGTTGCTTCGCAAAACAGAAATAATATCAACAATTCTTGAAACGCGAGGAAGGGACACAACCTTTTGATTCTTGCAGGCATCCTTCGCACTCATATTTCTCATAACCTGTTTGGGTCTTGAGTCAAGTAAAGGGATGCCCCTTAATTGGGCTTGCACTTCATACAGCCCTTCATTAAAAAAGTCACCCACGGCCTTAGAAATCAGAAGCACAAGCATGATTAACGGCAGGAGTTTCAAGTTGTTAGTAATTTCAACCATTATAACACATAAAGATACAGTCATTCTCATTGAGCCACCAAGAAAGGAAGCAGCACCAAGTAGAGCATACGTGCCCTCCTCAACATTTAGCTTCTTATAAAACTTAACAACAAACATTCCAACAAGCCGGCCATATGTTGATCCGATCATTATTCCTGGAACAAATTGACCAGCTGGAACAGCGGTTCCAAATGTCACGACAGCTAAGGAGTAAAACATGACCAGGAAGGTGATAAGGCTTTGTGCACTGTATTCATGGAATGTTTTTGCACTGAATAGATTACGTATTGCATCATCCTGAGTATTGAAGAAAATGGTTGCTAGGTCGTTGTATTCGTTATCTTTAGAACAATAAAAATTGACAAAATTCCCATCTGTTCCAGGTGGCCGAGGGCATTCGATGCCAGAATTAGTTTCTAACTGAGGACATGAACTGCATTTCCTCATCAATGGCAACACAAAGGAAATTGTGGATGTAACCAAAGATATAAGGCATGCTTCAAAGATCTTCACTCGTTTCCCCTTTTTGTGAAGATATGTTCGACGCCATTTAGTTATATACAGGGTAAGTTGATTGAATAATGCCCCTAGAAGTCCACCAATAACACCAATAATTGCCATAGGCAATAGTTCTTGGTAGGAGTAATCTTCTTGGCCTCCAGATATGTCCCAGATTATGAAACCCCCAGATCCAAAATGACCACACTTTCCACTCTTGCACCAGTTCATTGCTGATCGCACCACAACAGCCACAACAGCAGATGTAAAGAATACTCTCCACATAAGATGACTTCGCCACCAGGATGTAACTTCCTCCAGGGCAAATAGTACCCCACCAACCGGAGCTCTGAATGCTGCAGCAACCCCAGCTGCACATCCACATGTCACAAGGTCTCGCCGATCTCGGTCGCTTTCAAAAATCCGTACCCACCTAGAACTCAAATGGTATTTTGCTGATCCACCCTGTCCCAGAAGAGAAGCGATGCATGCCCCAGTATGAACAAGAGGCCCTTCTTTTCCTAGAGCCAAACCTCCTCCAACTGATCCAATGCTCCCAAAGATCTTCCCAACTAATGTCCTGAAAAGGAGGATTCCATGTGTATCCACTCCATTTAAGTAACCTTTGATCTCCGGAATACCAGATCCAGCTGCTGCTGGTGCGAAGTTTGTTACTATGTATACAGATGAGAAGACGAGGGCTAAATTGAAAACTATGTACACAAAGAACCCAACAAAATACGAGTGCTGTATTATAGCAAATGTTGCAGCATATTTCCAGCCGGAGAAGTTTTCAACCGCCAGATTAATAAAAATAGCAGCCAATCCAGTACCGACGCCGATCAGCAAGGAGAACAGCCACTTGAGCATGACGTAGTACGGCACCCAGAACTTGCTCCGCTGCGCCTGCTCCTCCCGGTAGGCGTAGTTCTCGATGACCTCGTAGTCGAGGCTCTCGACGCCGCCGGCGAAGAGCTCGTACCCTGCCGACGAGGGGGAGGCAGGGACGGGCCCGGGCCCCTCCGCCCCTGCCCCCGCCCCGTCGGCGGTGGGGAGCCGCGTCCACGCCAGCCGCGCCATCCCGATGCCGTCGGGGAGGTCCTGGTCGCCGGAGAGCATCGGATCGGGGGGGACCCCGCCCCCGAGATGCGATTCCAACGGCTCGACGACGGAGAGAGGTGGGGGGGAATTTTACTGCGCGGGTGTGGGGAAGAAGGAAAGCTGAGCCAAGAAGACTTGCTGGTTGGTCAAATCTGTGGTGTGGTGTGGTGTGTGTGTGTGTGTGTGTTTTGGGCGGGTGTGGTTTGTGCCGTCGCCTCGTGCGCTCGTCGGCGCGGTCGGCGTCGCGGGGTCGACGGCGTAGTGCGTGGCTTGGCTCCGGGATCTGAACCGCGG
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0229100.1 | 3 | 27862034 | A | C |
| Osa03LNT0229100.1 | 3 | 27864621 | T | G |
| Osa03LNT0229100.1 | 3 | 27865496 | G | T |
| Osa03LNT0229100.1 | 3 | 27865874 | A | C |
| Osa03LNT0229100.1 | 3 | 27866010 | T | G |
| Osa03LNT0229100.1 | 3 | 27866313 | T | A |
| Osa03LNT0229100.1 | 3 | 27867393 | C | T |
| Osa03LNT0229100.1 | 3 | 27868078 | A | G |
| Osa03LNT0229100.1 | 3 | 27868350 | A | G |
| Osa03LNT0229100.1 | 3 | 27868765 | C | A |
| Osa03LNT0229100.1 | 3 | 27868971 | G | A |
| Osa03LNT0229100.1 | 3 | 27870487 | A | G |
| Osa03LNT0229100.1 | 3 | 27871570 | A | C |
| Osa03LNT0229100.1 | 3 | 27871809 | C | T |
| Osa03LNT0229100.1 | 3 | 27869527 | C | T |
| Osa03LNT0229100.1 | 3 | 27868368 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0229100.1 | osa-miR5537 | Cleavage | 5.0 | 16.618 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR5789 | Cleavage | 4.0 | 20.636 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR6248 | Translation | 4.5 | 18.984 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR5079b | Translation | 3.5 | 18.235 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR5079b | Cleavage | 5.0 | 21.136 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR5079b | Cleavage | 4.5 | 12.086 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR167a-5p | Translation | 5.0 | 12.737 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR167b | Translation | 5.0 | 12.737 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR167c-5p | Translation | 5.0 | 12.737 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR168a-5p | Translation | 4.5 | 13.362 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR1430 | Cleavage | 5.0 | 14.985 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR169r-3p | Translation | 4.0 | 14.985 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR1853-3p | Cleavage | 4.0 | 20.525 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR1320-5p | Translation | 4.5 | 14.048 | 1 | 21 |
| Osa03LNT0229100.1 | osa-miR2099-5p | Cleavage | 5.0 | 18.224 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR2878-3p | Translation | 4.0 | 8.467 | 1 | 24 |
| Osa03LNT0229100.1 | osa-miR5079a | Translation | 3.5 | 18.235 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR5079a | Cleavage | 5.0 | 21.136 | 1 | 22 |
| Osa03LNT0229100.1 | osa-miR5079a | Cleavage | 4.5 | 12.086 | 1 | 22 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0229100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0229100.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0229100.1 | 3 | qSB-3 | Resistance or Tolerance | Bacterial blight resistance | R250 | C746 |
| Osa03LNT0229100.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0229100.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0229100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229100.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229100.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229100.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0229100.1 | 3 | QFlw3 | Morphological trait | Culm/leaf | RZ474 | C746 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)