© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0229900.1
ACATTTTTCTTTTCTACTCTTCTCAACCAAAGAGCACTACAACACTCAAACAAGACAATATTCTTATTTACATTCAGACAATGCATAAACTTGAGAAGATGCTACACAATCTAACTGGAGCATCTATCGATCACCAAAAAAAAAAGTTAAAACCACCGATGACATACTTACAGTACATAATTGTAACCGGCAAAATGATCATCAACTACCTTTTCATGCTTTTGGTTAGACATGATATGCTTTATATTTTCTCCATATTCGGTAAACCTTTCTGAACTTGTGCAAACCTCAATCAGCTTAAAGTTGTGATTGAGACTACATGGCGCGACATTGCACAACCAACATGTACAAATTTGTAACGTTCATCTGAGTTAGCGAAGTTTAAACATCATATACGGGCATGCGTTCTTCAATGGGCACACGGCAGATTGGACATTTCTTGCACTTATCAGAACAAGTCTTGCATAATGTTCTGTGCCGGCAAGGAAGTAAGACCATGCATATCTCCCCCTCGTAGCAAATCCTACAAAGAACCTTCTCATTTTGAAGCCTTTCAAATTCCTGCTTGGTACATTTGGTAATTTCTGATTGCTCTCCCAAAGCTGCTTGGAGCCTCCATACCTCTTCTGCAAGATCCCTCTTAGGCATTTTCCTGACTACCTCAGGTGGATAGCCACAAAATGTGTTGTACCCAGTAGATTCAGTATAGAATAACCGGGCTTGCTCTTCTTTGCTGCCTTCATCAATAGACCACCAACCAAGAAGCCTTGAACCACGATGAAGAAAAGCAAAGCAATCACGGACTTTTGATGAGATTGTAAGGTAATTAGGACTAACTGGTCCATTTCGTAATAGTAGAACAACCTTCTCCAACAATCTTGCTAGAGAGAAAAGGACACCAGCGCCTTGTAAAATAAACAGTGGGGAGAACAGTGCAAATATCGGAATATACTGAGCACTAGGAGGCGTACCCTCCAAGCGCATACAAAGCAAAACTTGGAAAATCACCAGTGGTATTTTCATTACGTGACCTCCTATGTCAGGAAGACCACAGAGCCTCTCTTGTTCATGATCTTCTAGTGATGGGAGGAGAAGACCACTCTCCCAATCACGGTATCTAATTGCCGCTGATGATGAGCTAGCCTCCCCAGGATTAGGAGATTTATGAATCATGGGATTAAACCATCTAGTACAAACAAGAAATGCAAAACACTCCGCGATTCCATAATTTATAAACAAATCCCACCATCCCAAAGCACCAACATCACCTGTCATGCAATAATAATATCACAAAACATTTCAGAGTAGAGGAAAATTAGGCCGAAGAGAAATAAAAACCTGAATATTGTACAATCTAAGATAGTTTGCTGAACATGTTGTTCTTATCACATCGAACTAATAAATGATTTGATTTAAAAAGTAGCACTTAAAAGCTCATGGAGGAGGCAGACAAAGCAGCCCCTAGTAACTGGAACAACTCAGAACTTTGATGGATCCTGGTCGCTTGGGTAATCTTGAAGGACCGGATTTTCAATTGGGAAAGTAGGAACTGGATGCGGTGATTGCAGCAATCACCGCAGAGGCAAGACTCTGGATCGTTGCAGGAGCAAAGATGGCTCAATCTGTGGTCTAACATCGCTCTGGCACATAGGTCGCACAATTGTATCACGAGAATTAATCTTGTACTACTCATTAGGTAGTTGCCCAGCTATATGGAGCTAGGCAGGGGATGTAACATTCAAACTCCTTAATGCTACACAAGTCTTTTGCGTATACCAAAAAAAAAAGAACTGTAATAGATCACCAAATTGAAAGTATCGTCAAAGAAAATCGACCACATGAAATGCATTAAGGAGTTTGATTCAGTGTGGAGAAGCTGACTTCGATTTTGTGTTGGGAATTGGAAGATTACACTCTTTAGAGTGAGAAACCATGGAAAAATGTTGCATATATGCATGTGAATGGGAAAGCAGCTGGTGGGTCTTCACATCACGGGAACCCTAGGAATATCTTTTTGCTCTCTATCCAACATTGTATTGCTTATACTAAAGATAGTTTTAACTTGCACGAATTTATGCTTTAAACTGCCAAAAATAGAAACCCGGCCAGTTCAGGTGAAATCACCAGCCATTTCCAAATAGTAGAAAACTGCCTGGCTTTCAAAACCAAGCTGCTGAATGTAATGTTTCCAGATTTTATGGTTAATTGACAATCTAATCTTGTTTTAGTAACTATTGTCTCATTTGCAACTACCTAATCACTCTTAGAAGAATGTCATTGTGACAACCACTCTAGTAAACAATGAAGCGACTTTTGAGAAAGCCATATCCTACCAACTATAGAGGCTTAGCAGACAAACAAACAATATTAGTCATGTGCAAGGAAGCAAACTTTTTAACTCTACAGTCTACAGTGCTTGAAAACACATAACAAATAGGACATGCCATAATGAAGGTCAAAAAACAAAAAGGAGATCCAGGAAACTTTACCAGACAGCTTCAAAAGTGTGAAGGTTGTAGCAGCTATAAGAAACACCATAGAAATTGCAACCCAAAAGTGAGGAAGTGTCTCCCAAATAGCTTCATCGCTCATACTTTCTTCATCTCCTGGCATTAAAGCTCTACACATTCTGAAATTGTCAGCAAGAATAATCACTTCAAAGGCCAGAAGAGGAAGGAATACAATCTTCAAATCAACAGTCGGCTTACTTTTAACTCTCAAACTTTCGAGATATATGCAAAGCAGCAGCTCAAACGCAATAAGCAACGGCGCTGCAACAATTGAATGGCAAGGAGCCCAATGACGGCCATGAGGAAGCGAAGGGGCTGGCATTGAAAACCTTCCACGGGCAACAATGCCATGAAATAGCCATAGAGGGATGAATATAATCCTGCATGATGGAAATAGCAGAATTAGCATTCGGTATTAATACCTTCACTGCTACAGACAAAGCAGTCAACAATGTCTTCTGAATCTGCTACCATCATTATAGGAACAAGAGCGCTGGGTTACTCAAACAAAT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0229900.1 | 3 | 28449353 | T | A |
| Osa03LNT0229900.1 | 3 | 28450153 | A | G |
| Osa03LNT0229900.1 | 3 | 28450702 | A | C |
| Osa03LNT0229900.1 | 3 | 28450776 | A | G |
| Osa03LNT0229900.1 | 3 | 28450889 | T | C |
| Osa03LNT0229900.1 | 3 | 28451025 | G | T |
| Osa03LNT0229900.1 | 3 | 28451391 | A | G |
| Osa03LNT0229900.1 | 3 | 28453601 | G | A |
| Osa03LNT0229900.1 | 3 | 28453908 | G | A |
| Osa03LNT0229900.1 | 3 | 28454275 | T | C |
| Osa03LNT0229900.1 | 3 | 28454641 | C | T |
| Osa03LNT0229900.1 | 3 | 28453626 | A | T |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0229900.1 | osa-miR5826 | Cleavage | 4.5 | 11.689 | 1 | 24 |
| Osa03LNT0229900.1 | osa-miR160a-5p | Cleavage | 5.0 | 20.953 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR160b-5p | Cleavage | 5.0 | 20.953 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR160c-5p | Cleavage | 5.0 | 20.953 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR160d-5p | Cleavage | 5.0 | 20.953 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR166a-5p | Cleavage | 4.0 | 7.238 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR166b-5p | Cleavage | 4.5 | 7.238 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR166c-5p | Cleavage | 4.0 | 7.238 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR166d-5p | Cleavage | 4.0 | 7.238 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR166e-5p | Cleavage | 4.0 | 7.238 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR160e-5p | Cleavage | 5.0 | 20.953 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR528-3p | Cleavage | 5.0 | 14.495 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR444d.3 | Cleavage | 3.5 | 13.975 | 1 | 21 |
| Osa03LNT0229900.1 | osa-miR1435 | Cleavage | 5.0 | 8.184 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR1866-5p | Cleavage | 4.5 | 14.961 | 1 | 24 |
| Osa03LNT0229900.1 | osa-miR2095-5p | Cleavage | 4.5 | 14.063 | 1 | 22 |
| Osa03LNT0229900.1 | osa-miR2105 | Cleavage | 4.0 | 15.991 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR2105 | Translation | 5.0 | 7.075 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR1862f | Cleavage | 4.0 | 19.866 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR1862g | Cleavage | 4.0 | 19.866 | 1 | 20 |
| Osa03LNT0229900.1 | osa-miR5488 | Cleavage | 5.0 | 9.716 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0229900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229900.1 | 3 | qRFWd3-2 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229900.1 | 3 | nan | Resistance or Tolerance | Blast resistance | RM16 | RM168 |
| Osa03LNT0229900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ403 | RZ630 |
| Osa03LNT0229900.1 | 3 | nan | Morphological trait | Shoot/Seedling | RZ452 | RZ448 |
| Osa03LNT0229900.1 | 3 | nan | Morphological trait | Panicle/flower | RZ448 | RZ403 |
| Osa03LNT0229900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C136 | R1618 |
| Osa03LNT0229900.1 | 3 | qRFWw3 | Resistance or Tolerance | Other soil stress tolerance | C944 | C746 |
| Osa03LNT0229900.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | C746 | RZ448 |
| Osa03LNT0229900.1 | 3 | Qpn3 | Morphological trait | Culm/leaf | CDO337 | OSR31 |
| Osa03LNT0229900.1 | 3 | Yd3-13 | Morphological trait | Seed | RZ403 | CDO337 |
| Osa03LNT0229900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Osa03LNT0229900.1 | 3 | qSV-3-1 | Morphological trait | Shoot/Seedling | RM156 | RM168 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)