© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)
>Osa03LNT0236200.1
TTAGTAGTATGAAGTATCACTATCACGTTCCCAAATGTGGCAATAGGAAGCGTCAAATCATTTGCAAATGTGCCTCCTCGGAAGGGAGGACGGAACACCGAACACGATCTCTCAACTGTAGCTCATCAAAACGTCCACTGTTACGTCTGCTCCACCGAGTACAGTAACAAGAACAGGACATTGTCTCAATCAGAAGAACGTCATGGTCCTGCAGAAGTTTATCGCCATGGTCCAGCAGAAGTTTTTGCCTGGAAGCGTTTGGCAAAGCGAGCAGACGCTCTCTGGCTCCCTGCACGCCCATTCCATAGACGGGCACACACTACACACAGAACACAGAGGCATTCACTTCGCCTACCAACCTTCTTCAGTTCAGATACACACGGGTAAATGAAGATGATAAATGCGTCCTGGCACGCAGTGACGGTGTACCCCTCCCTCATGTCAGCCTCTCACTTTTGCATATACACCACCATGTTGGGCAGAGAGACGCTTGATGAGTATAGGTAGGTACATGCAGTAGTAGTACAGTACTCCACTATCCCGAAAGGTATGTGTAAAGTTCAGGGTATTTATTGAACCCTGTCTCGGCGAACACATTTGGACAAAATCGACCGGAAATCCTCCAACGGCTGTATCTGCATAAACAACAGAGCTACTACAGTCGACGTTTGCAAGTGCCAAACAATGAACAGTATCGTATTGCAACTTGCAAGAAACGAATTCTTCTATCGGAACATTTCTACGACTATGGTTACAACCATTTCTCTTACTTATAAACACTAGCAGCAGATACGCACCTCGAATGAGTGCGTGCTCCTTTGTCTACGTTAGCATCATCTACTCATCTACACAAGAGTTCATGAATGGGATAACAACTGCAGACTAAGCTGGTTAATCTGATCGATGCTTTGCATTACCAAAATTGCAGTGTAGAGTAAGTTTCAGAAGCTCATCTTCGCTCCCTGGCAAGAGGCTTCGCCTTGCGCCTATGCCCGAAGCTGTTAACAAGGTCTTTGCGGGCGCACACCGGGAACAGGTGGACACCAGGCATCCTTAGACGCCTCAGCACATAAGGGAAGCTCAGCTGATCCCGGGACGTGAACCTAACCACTTCGTTGAACCAAAGGCACATGAAGAGGTTGGTCAAAGGGGCATGATCCCTCACAATAACTGAAGCTTCTGCGAGAGCTTTCTTTCCATTGAATCGTTTTTCATCTGGAATGCCATCTTGTCGGTATTGATCCAATTGTATTTTAACTTCTTCCGGAGTTGCCTTGTGCTTCTTAACAATTGCTTTACCTTCATCATACAAACTACTCCTAGCTCCATGTTCAGATAATGCTAAAGAAGAGTTTGAACGCCACAGAAGGGCTTCAAGGACTCCAAGTGGATCTCTCCGAAACTGAGATTTTGAATCCACCCAAATTGAGTATCTTGCCATAGGGAAAAGGCGATGACTTATCAGCTTGGGAATTTTCCCATTCAATCGTTGATCTGAGAAAGGAAGATCTCTCACAAGAATAATCCGCCAAAGGCCAATCATGAGGTTTTCACCAATCTTGTTCCCTTCCTCCTCTTGAGCTGCACGAGTGACTTCATCCCAGAATGCAACATAGCAAACCTTCTTTATAGATACTTCTGTCATTCCTATTGGCTGGTGAAGGTCATCCCCTCCACCAAATGCACAAGTGGCCACAACGACACTACAAGACCTCATATAATCTTTATCAACATCAGAAACTTTGAACCCTCCATTTTCGTTATAGAAGCCACAATGCAAAGTTGTGAGTTCCTTCATCTTGAAACTTTCTTCTCTTTCATTTAGAGTCTGGTATCCTGTGAATGAGTTAAAACGTGATATCTCTGTTCGAGATGAATCATCATCACCAAGATGCAGCAGACTGGACTTGTACACCACTTTCTGGACTGACAGATTTTGTTCAGGAACTTCAGGAAGTTCCAGATTCTGCAACTTCTCAGGACCAAGAATCTTCAAGCATGGCTTCCGGGCGCCATCGGCGGCGCGGACGGCGCCGGTGTGGTCGACGCGGGTAAGGTTGGCCGCCGGAGGCGGCGTGGGGGAGGACGGGGAGAGGCGGTAGGACTCGTAGAGGAGGAGGGAGACGGCGAGGGTGGCGAGGAGGAGCGGGGCGCACAGCCGCGCGGCGCGGCGGAGGAGGCGGCGCCGCGCGGCGGAGGCCGGGTGGCGGTGGCGCTTGCGGCGGACGCGGACCCGCACCCTCCCCGAGGCCTCCTCGTCGTCGGAGACGGAGATGGAGATGCCGTGGATCAGCGACGACGACGATGACGGCGACATGGACGGAGCGGAGCTCGGGGCTCCGGGGAGGACGAGACGGGCCGCCTCCGGTGGTGGGCTCGAGCGGCTGGGGCTAACCGGTT
| Transcript ID | Chromosome | Locus | Ref | Alt |
|---|---|---|---|---|
| Osa03LNT0236200.1 | 3 | 31840083 | G | A |
| Osa03LNT0236200.1 | 3 | 31841345 | T | C |
| Osa03LNT0236200.1 | 3 | 31841423 | A | G |
| Osa03LNT0236200.1 | 3 | 31841433 | T | C |
| Osa03LNT0236200.1 | 3 | 31841743 | G | A |
| Osa03LNT0236200.1 | 3 | 31844006 | T | C |
| Osa03LNT0236200.1 | 3 | 31844267 | A | G |
| Osa03LNT0236200.1 | 3 | 31842951 | A | T |
| Osa03LNT0236200.1 | 3 | 31843481 | A | G |
| Transcript ID | MiRNA ID | Inhibition | Expectation | Score | Binding Start | Binding End |
|---|---|---|---|---|---|---|
| Osa03LNT0236200.1 | osa-miR5830 | Translation | 5.0 | 19.144 | 1 | 24 |
| Osa03LNT0236200.1 | osa-miR6248 | Translation | 3.0 | 9.609 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR162a | Translation | 5.0 | 17.445 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR416 | Translation | 5.0 | 16.705 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR444b.2 | Cleavage | 4.0 | 15.612 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR444c.2 | Cleavage | 4.0 | 15.612 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR5338 | Cleavage | 3.5 | 18.409 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR160a-3p | Cleavage | 5.0 | 22.717 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR160b-3p | Cleavage | 5.0 | 22.717 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR160c-3p | Cleavage | 5.0 | 22.717 | 1 | 21 |
| Osa03LNT0236200.1 | osa-miR528-5p | Translation | 4.5 | 20.908 | 1 | 21 |
| Transcript ID | Chr | QTL Gene | Character Major | Character Minor | Marker Interval1 | Marker Interval2 |
|---|---|---|---|---|---|---|
| Osa03LNT0236200.1 | 3 | nan | Morphological trait | Panicle/flower | G249 | RG418 |
| Osa03LNT0236200.1 | 3 | qSBR-3 | Resistance or Tolerance | Sheath blight resistance | G249 | G164 |
| Osa03LNT0236200.1 | 3 | qPES-3 | Morphological trait | Panicle/flower | G249 | G164 |
| Osa03LNT0236200.1 | 3 | QFll3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236200.1 | 3 | QSn3 | Morphological trait | Culm/leaf | G249 | RG418 |
| Osa03LNT0236200.1 | 3 | nan | Resistance or Tolerance | Drought tolerance | R1618 | G164 |
| Transcript ID | Pre-miRNA | Identity(%) | Alignment Length | Pre-miRNA start | Pre-miRNA end | E-value | Bitscore |
|---|
© Copyright 2019 Huazhong Agricultural University , Central China Normal University (School of Life Science, Central China Normal University)